Tuanshanicoccus lijuaniae: I4Q36_08860
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Entry
I4Q36_08860 CDS
T11390
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
tlj Tuanshanicoccus lijuaniae
Pathway
tlj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tlj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
I4Q36_08860
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tlj03019
]
I4Q36_08860
Messenger RNA biogenesis [BR:
tlj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
I4Q36_08860
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NCBI-ProteinID:
QQA36889
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Position
complement(2038210..2039892)
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AA seq
560 aa
AA seq
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MSKIQIIPLGGVREAGKNLYAVEVNQSIFVLDCGLVYPEGEMLGIDYVIPDFSYLEDNKE
RIVGIFLTHGHADAVGALPYLLEVVDAPVFGTEFTIAIASITAKAKGLGDRLENFFKIDE
KMEIEFEDAHVTFFKTTHSIPGSVGIVIHTDEGQIVYTGDFRFDAGATPLYQTEFGRLTD
IGETGVLALLSDSANAESSFDNVSDLRVLDEIVETFSNADGRVIVACIGSNISRIQQVMD
AAYQTNRKIFFSGTELYDIVDTALEMDKIKIPSRRILGQIKHLNTTPDEEVVILETGDVG
EPLKAVEAMCRGQHRQVRIKDGDLVYIASTPSLAFETTMARIKDQVYRCGATVKEITDHI
STSGHASQTDLKLMLNFLKPKYLIPVNGEYRMQNAHAELARQLGYTDEQLLLPALGDVIE
LHQGVLQITKQVEAGDVLVDGIGVGDIGSVVLRDRRILSEEGIFIVVATISRRLGKVLVG
PQITSRGFIYVKENIEILQTCSTMTLDTLDKHLASDSFDWNELKQDIREQLGRYLYQETK
RRPVVLPIIMEASSYQMPNE
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaatacaaatcatcccactcggtggggtgcgagaagcagggaaaaacttatat
gcagttgaggtgaaccaatcgattttcgtgcttgactgtggtttagtatatccagaaggg
gaaatgctcggtatcgattatgtgattccagatttttcttacttggaggacaataaagaa
cgaattgtcggaattttcttaacacatggacatgcagatgccgtaggtgcattaccttat
ttattagaagttgtagatgcgcctgtatttgggactgaatttacaattgcgattgcgtct
attacggctaaagctaaaggcttgggcgaccggttagaaaacttctttaaaattgatgaa
aaaatggaaattgaatttgaagatgctcacgtgacatttttcaaaacaacccactctatc
ccaggttctgtaggtattgtcattcataccgatgaaggacaaattgtttacacgggtgat
tttcgttttgatgccggcgcgacaccattatatcaaacagaatttggacgtttaaccgat
atcggtgagacaggcgttttagccttattaagtgattcggctaatgcagagagcagtttt
gataatgttagtgatttacgtgtactagatgagattgtagagactttttcaaatgcggat
ggtcgtgtgattgtagcatgtattggcagcaatatttcgcgtatccaacaagtgatggat
gcagcatatcaaacaaatcgtaaaatctttttctctggtactgaattatatgatattgtc
gatacagcattagaaatggataaaattaaaattccgagccgccgtattttgggacaaatt
aagcatttgaatacaactccggacgaagaagtggttattttagagactggggacgtcggt
gagccactcaaggcagttgaagcaatgtgtcgcggtcaacatcgtcaagttagaattaaa
gatggtgatttagtgtatattgcatcaacaccatcattagcgtttgagacgacaatggct
cgtattaaagaccaagtgtatcgttgcggcgctacagtaaaagaaattaccgatcacatc
agtacgagcggccatgcgagtcaaacagatttaaaactaatgttgaacttcttgaagcca
aaatatttaatcccagttaatggtgaataccgtatgcaaaatgcacatgccgagttagcg
cgacaattaggttatacggatgaacagttattattacctgcattaggcgatgttatcgaa
cttcatcaaggggtactacagattacgaaacaagtagaggctggggatgtattggtagat
ggtatcggtgttggtgatatcggtagcgttgttttacgtgatcgtcgtattttaagtgaa
gagggaatctttattgtagtggcgacaatttcacgtcgtttaggtaaagtcttagttggc
ccacaaattacgtcgcgtggctttatttacgtaaaagaaaatattgaaattttacaaaca
tgttcaactatgacattagacacattagataaacatttagcgagcgacagtttcgattgg
aatgaattgaaacaggatattcgcgagcaattaggccgctatttgtatcaagaaacaaaa
cgccgtccagttgtattgccgattattatggaagcctcaagctatcaaatgccaaatgaa
taa
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