Tuanshanicoccus lijuaniae: I4Q36_08890
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Entry
I4Q36_08890 CDS
T11390
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
tlj Tuanshanicoccus lijuaniae
Pathway
tlj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tlj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
I4Q36_08890 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tlj03019
]
I4Q36_08890 (pnp)
03016 Transfer RNA biogenesis [BR:
tlj03016
]
I4Q36_08890 (pnp)
Enzymes [BR:
tlj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
I4Q36_08890 (pnp)
Messenger RNA biogenesis [BR:
tlj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
I4Q36_08890 (pnp)
Transfer RNA biogenesis [BR:
tlj03016
]
Prokaryotic type
tRNA degradation factors
I4Q36_08890 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
S1
RNase_PH_C
KH_1
PNPase
S1_RRP5
OB_RRP5_4th
SPATA25
CvfB_2nd
eIF-1a
KH_KhpA-B
Motif
Other DBs
NCBI-ProteinID:
QQA36895
LinkDB
All DBs
Position
complement(2046487..2048589)
Genome browser
AA seq
700 aa
AA seq
DB search
MAEKHIFRTTLGGRPLSVEIGELAKQANGAVLVRYGDTVVLSAAVASKRPTTGDFFPLTV
HYVEKMYAVGKVPGGFIKREGRPSETATLTSRLIDRPLRPMFPEGVRNEIQVTNTVLSVE
QDCTPEMAAMLGSSLALAVSDIPFDGPIAGVNVGRVNGELMINPTVEQAEASDIELTVAG
TATAINMVESSAKEVSEADMLAALLFGHEAIKELVAFQNEVVAAIGKPKFELTLAMLDPE
VEQQVKTLYKEKMVAAIQTEEKKAREAAMEAVIEEALVHFDDVLGDHPEKEQLLKDVNAA
LHDLEKDEVRRLITKERVRPDGRKIDEIRPLSSSVALLPRVHGSGLFTRGQTQALTAATL
APLGEHQIIDGLGAEEMKRFIHHYNFPNFSVGETGRVGSPGRREIGHGALGERALKQVIP
SVEDFPYMIRLVSEVLESNGSSSQASICAGTLALMDAGVPIKAPVAGIAMGLVMEGEDYT
VLTDIQGLEDHLGDMDFKVAGTKDGITALQMDIKIQGITEAILVEALEQAQKARIEILAE
LTSTIAEPRAELSPYAPKIELITIDPEKIKVVIGRGGETINSIIDATGVKIDIDQSGAVS
VASSDADMIKKAIEMIELLVKEVEVGESYEGTVKRIEKFGAFVEVLPGKEGLVHISELEH
RRVNNVEDVIKLGDKVTVKVIEIDDKGRINLSRKALLPRD
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaaaacatatttttagaacgacattaggtggtcgcccattatcagttgaaatc
ggcgaattagccaaacaggcaaacggtgcagttttagtacgttatggggatacggttgtt
ttatcagcagctgttgcttcaaaacgtcctacaacaggagatttcttcccattgaccgta
cattatgtagaaaaaatgtacgcagttggaaaagtgccgggaggtttcattaagcgcgaa
ggacgtccgtctgaaacagcaacattaactagtcgtttaatcgaccgtccgctacgtcca
atgttcccggaaggggttcgtaacgaaattcaagtcactaataccgtattatctgttgaa
caagattgcacacctgaaatggcagcaatgttaggttcatcattagcattagctgtttcg
gatattccatttgatggaccaatcgcaggtgtcaatgtgggacgtgtcaacggagaatta
atgataaatccaacggttgaacaagcagaagcatcggatattgaattaacagtagcgggt
acagcgactgcgattaacatggtagaaagtagtgctaaagaagttagcgaagcggatatg
ctagcagcgttattatttggacatgaagctattaaagaattagtagctttccaaaatgaa
gtcgtcgctgctattggcaaaccaaaattcgaattgacactagcaatgttagacccagaa
gtagaacaacaagtaaaaacattatataaagaaaaaatggtcgcagccattcaaacagaa
gagaaaaaagcgcgtgaagctgcaatggaagcagtgattgaagaagcgttagtgcatttt
gatgatgttttaggcgaccatccagaaaaagaacaattattaaaagatgtaaatgctgct
ttacatgatttagaaaaagatgaagtacgtcgtttaattaccaaagaacgtgttcgacct
gacggacgtaaaattgatgaaattcgcccattgagttcatcagtagccttattaccacgt
gtacacggttctggtttatttacccggggacaaacacaagcattaactgctgcaacgtta
gcgccattaggcgaacaccaaattatcgacggtttaggtgcagaagagatgaaacgcttc
attcaccactataatttcccgaatttctcagtcggcgaaacaggtcgtgttggtagtcca
ggccgtcgtgaaattggacatggcgctttaggtgaacgtgccttaaaacaagtcattcca
tcagtggaagatttcccatatatgattcgtttagtttcagaagtattagaatcaaatggt
tcatcctctcaagcaagtatttgtgcgggaacattggctttaatggacgctggtgtgccg
attaaagcgccagtagctggtattgcaatgggattagtaatggaaggcgaagattatact
gtcttaacggatattcaaggtctagaagatcacttaggtgatatggactttaaagttgcc
ggaacaaaagatggtattactgctttacaaatggatattaaaattcaaggtattacagaa
gcaatcttagttgaagcactcgaacaagcgcaaaaagcacgtattgagattctagcagaa
ttaacaagtacaattgctgaaccgcgtgcagaattaagtccgtatgcaccgaagattgaa
ttaattacgattgaccctgaaaaaattaaagtggttatcggtcgtggtggtgaaacgatt
aattcaattattgatgcaactggcgttaaaattgatattgaccaatctggtgctgttagt
gtggcttcttcagatgcagatatgattaagaaagcaatcgaaatgattgagttgttagtt
aaagaagttgaagttggagaatcatacgaaggtacggttaagcgtattgaaaaatttggt
gcctttgtagaagtattacctggtaaagaaggtttagttcacatctcagaattggaacac
cgtcgtgtgaacaatgttgaagatgtcattaaattaggcgataaagtaaccgttaaagtc
attgaaattgatgataaaggcagaattaacttatctcgtaaagccttattacctcgagac
taa
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