Tuanshanicoccus lijuaniae: I4Q36_09495
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Entry
I4Q36_09495 CDS
T11390
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
tlj Tuanshanicoccus lijuaniae
Pathway
tlj03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tlj00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
I4Q36_09495 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tlj03021
]
I4Q36_09495 (rpoC)
03400 DNA repair and recombination proteins [BR:
tlj03400
]
I4Q36_09495 (rpoC)
Enzymes [BR:
tlj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
I4Q36_09495 (rpoC)
Transcription machinery [BR:
tlj03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
I4Q36_09495 (rpoC)
DNA repair and recombination proteins [BR:
tlj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
I4Q36_09495 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
QQA37002
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Position
complement(2219369..2223016)
Genome browser
AA seq
1215 aa
AA seq
DB search
MIDVNNFEAMQIGLASSEKIRSWSYGEVKKPETINYRTLKPERDGLFCERIFGPTKDWEC
SCGKLKRVRYKGRVCDRCGVEVTKAKVRRERMGHIELAAPVTHVWYFKGIPSRMGLVLDV
SPRYLEEVIYFASYIVIDPGDTPLEAKSLLTESEYRERKREYGDRFYAKMGAEAIKELLE
AVDLEAEVAELKEILKTATGQKRTRAIRRLDILDAFRESGNQPSWMVMDVLPVIPPDIRP
MVQLEGGRFATSDLNDLYRRVINRNNRLKRLLDLGAPSIIVQNEKRMLQEAVDALIDNGR
RGRAVTGPGNRPLKSLSHMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPNLKMYQCGLPKE
MAIELFKPFVMKELVEREIATNIKNAKRMIETQDDAIWPVIEEVIREHPVLLNRAPTLHR
LGIQAFEPTLVEGRAIRLHPLVCEAFNADFDGDQMAVHVPLSEEAQAEARLLMLAAQNIL
NPKDGKPVVTPSQDMVLGNYYLTLEEPGRVGEGLVLSTVGEAEIAYQSGYAHLHTRVAIP
AKALPGKPFTEWQKSRLMVTTIGKLLFNEIMPLEFPYLNEPTNENLTVQTPDKYFLEPGT
NVKEAIAAMDMVPPFKKKDFGNIIAEVFKRFHITETSVMLDKLKNLGYKYSTRAGITVGV
ADVLRLESKAGILEEAHKRVDNITKQYRRGLITEDERYESVIRTWEQAKDKVQEDLKNSL
PRLNPIHMMSDSGARGNISNFTQLAGMRGNMAAPSGKIIELPITSNFREGLSVLEMFIST
HGARKGMTDTALKTADSGYLTRRLVDVAQDVIIREDDCGTDKGIEVTEIADGNSVIESLE
ERLIGRYTQKTVRHPQTGDVIIAADKLITEDKAAEIAAAGVEAVTIRSVFTCDTKHGVCK
HCYGRNLATGMEVEVGEAVGTIAAQSIGEPGTQLTMRTFHTGGVAGGGDITQGLPRIQEI
FEARNPKGRATISEVSGTVETIEEKANDRSKDITIVGVNDTRTYNVPYQSRLKVKEGDQV
ERGQALTEGSIDPKELLRVTDVITVEKYLLREVQSVYRGQGVEIGDKHVEVMVRQMLRKV
RVMDPASTNILPGALMDIADFTQANIEAITAGEVPATARPVLLGITKAALETKSFISAAS
FQETTRVLTDAAIRGKKDVLLGLKENVTIGKLIPAGTGMARYRNIKSNLEVPVEALLDMD
VTAVEDNSDVETPTV
NT seq
3648 nt
NT seq
+upstream
nt +downstream
nt
ttgatcgatgttaataattttgaagcgatgcaaatcggattagcgtcttcggaaaaaatt
cgtagttggtcatatggtgaagtcaaaaaacctgaaaccattaactatcgtacattaaaa
ccggaacgtgatggtttgttctgtgaaagaatttttggaccaacaaaagattgggaatgt
agctgtggtaaattaaaacgtgtacgctataaaggtcgtgtgtgtgatcgttgtggtgtg
gaagtaacgaaagcaaaagtgcgtcgtgagcgtatgggacatattgaattagctgcacct
gtgacccatgtttggtattttaaaggaattccaagccgtatgggattagtgttagatgtg
agtccacgttatttagaagaagtaatctattttgcctcttatattgtaattgatccaggc
gatacaccattagaagcaaaatcattgttaacagaatctgaatatcgcgagagaaaacgt
gagtacggtgaccgtttctacgcaaaaatgggtgcagaagcgattaaagaattgttagaa
gcagttgacttagaagcagaagtggctgagttaaaagaaatcttaaaaacagctactggt
caaaagagaacacgcgcgattcgtcgtttagatattctggatgcctttagagaatccggt
aaccaaccatcatggatggtcatggacgttttaccagtgattccgccggatattcgtcca
atggtgcaattagaaggtggacgttttgcgacaagtgacttaaatgacttatatcgtcgt
gttattaaccgtaataatcgtttaaaacgtttgttagacttaggcgcaccaagcattatt
gttcaaaatgaaaaacgtatgttgcaagaagcggtggatgcgttaatcgacaatggtcgt
cgtggtcgtgcagtgacgggaccgggaaatcgtccattgaaatctttatcacatatgttg
aaaggtaagcaaggacgtttccgtcaaaacttattaggaaaacgtgtggactattctgga
cgttcagtaatcgttgtgggtcctaacttaaagatgtaccaatgcggtttgccgaaagaa
atggcgattgaattatttaaaccatttgtgatgaaagaattggttgagcgtgaaatcgca
acaaatattaaaaatgctaagcgtatgattgagacacaagatgatgcgatttggccagtt
atcgaagaagtgattcgtgagcacccagtattacttaaccgagcacctaccttgcaccgt
ttaggtattcaagcgtttgaaccaaccttagttgagggacgtgcgattcgtttacaccca
ttagtatgtgaggcgttcaatgccgacttcgatggggaccaaatggcggttcacgtacca
ttatctgaagaagcacaagcagaagcacgtttactaatgttagcagcgcaaaatatcttg
aaccctaaagatggtaaaccagttgttacaccatcacaagatatggtcttaggtaactac
tacttaacattagaagaaccaggacgcgtgggtgaaggattagtattaagtacagttgga
gaagcagaaattgcctaccaaagcggatatgctcacttgcatacacgtgtagctattcca
gctaaagctttaccaggcaaaccatttactgaatggcaaaaatctcgtttaatggtgaca
acgattggtaaattattattcaatgaaattatgccattagagttcccttacttaaacgaa
ccaacaaacgaaaacttaaccgttcaaacaccggataaatatttcttagagccaggtact
aatgtcaaagaagctattgcggcgatggatatggtgccaccatttaagaaaaaagacttt
ggtaacatcattgcggaagtcttcaaacgattccatattacagaaacctctgtcatgtta
gataagttgaaaaacttaggttacaaatactcaacacgtgcaggtattacggttggggta
gcggatgttctacgtttagaatcgaaagctggtatcttagaagaagcacataaacgtgtc
gataacattactaaacaatatcgtcgtggtttaattaccgaagatgagcgttatgaaagt
gttatccgtacgtgggagcaagccaaagataaagttcaagaagatttgaaaaactcatta
ccacgcttgaatccaatccatatgatgtctgattcaggtgcccgtggtaacatctcaaac
tttactcaattagcgggtatgcgtggtaacatggcggcgccaagtggcaagattatcgag
ttgccgattacgtcaaacttccgtgaaggattatctgtcttggaaatgtttatttccact
cacggtgcccgtaaagggatgaccgatacggccttgaaaacagccgattcaggttactta
acacgtcgtttagtagatgtggcgcaagatgttattattcgtgaagatgactgtggtacg
gataaagggattgaagttacagaaattgctgatggcaatagtgttatcgaatccttagaa
gaacgtttaatcggacgttatacgcaaaaaactgttcgtcatccgcaaaccggtgatgtc
attatcgctgcagataaattaattaccgaagataaagccgctgaaattgcagcggcgggt
gtcgaagccgttacgattcgttcagtctttacctgtgatacgaaacacggtgtatgtaaa
cactgttatggacgtaacttagcaacaggtatggaagttgaagtgggtgaagcggttggt
acaatcgctgcacaatcaatcggtgaaccaggtactcagttaacaatgcgtacattccat
acgggtggggttgccggtggtggcgatatcactcaaggtttaccacgtatccaagaaatt
tttgaagcgcgtaatccaaaaggtcgtgcaaccatttcagaagtatccggtacggttgaa
acaattgaagaaaaagcaaatgaccgttctaaagacattacgattgttggtgtgaacgat
actcgtacatataatgtaccttaccaatcacgcttgaaagtaaaagaaggcgatcaagtt
gaacgtggtcaagcattgactgaaggttcgattgatccgaaagaattattacgtgtaact
gatgtaattaccgttgaaaaatacttattacgtgaagtgcaatccgtttatcgcggccaa
ggggtagaaatcggagataaacacgttgaggtaatggttcgtcaaatgttacgtaaagtt
cgcgttatggatccggcatctaccaatattttaccgggtgctttaatggatattgcagac
tttacacaagccaatattgaagctattacagccggtgaagtgccagcgactgctcgtcca
gtattactaggaattactaaagctgccttagaaacaaaatcatttatttctgcagcttca
ttccaggaaacaactcgtgtcttaacagatgcggcgattcgtggtaagaaagatgtctta
ttaggattgaaagaaaatgttacaatcggtaaattaattcctgcaggtacaggtatggca
agatatcgtaatattaaatcgaatcttgaagtaccggtcgaagcactattagatatggat
gttacagctgttgaagacaattcagacgtcgaaacacctactgtataa
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