Candidatus Tyloplasma litorale: TYPL_2990
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Entry
TYPL_2990 CDS
T09841
Symbol
deaD
Name
(GenBank) helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
tll
Candidatus Tyloplasma litorale
Brite
KEGG Orthology (KO) [BR:
tll00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tll03019
]
TYPL_2990 (deaD)
03009 Ribosome biogenesis [BR:
tll03009
]
TYPL_2990 (deaD)
Enzymes [BR:
tll01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
TYPL_2990 (deaD)
Messenger RNA biogenesis [BR:
tll03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
TYPL_2990 (deaD)
Ribosome biogenesis [BR:
tll03009
]
Prokaryotic type
rRNA helicases
TYPL_2990 (deaD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
UvrD-helicase
CsgA
SecA_DEAD
Terminase_6N
PhoH
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
BDU67646
LinkDB
All DBs
Position
complement(323162..324277)
Genome browser
AA seq
371 aa
AA seq
DB search
MHINYINPSLNKYLNYKKFEKLLPIQNIAIPKLIKKKNLFIEAPTGTGKTLTFLLPILQN
INFDNFNTQAIIIAPTRELSTQIHNVLKEIKPFLDYEIKSLLAIGGEDFNDQERKLKNGS
QIIIGTIDRINSLREKINHSLIDLKYFIIDEVDMIFNFDAFKNIEVISKKIPYWTTISFF
SASFPLELQNLIKKTFNKEIDNIIIKKDAQDKIDSFFIKAYDGDKLKTLIELLNSNQFNP
FFSLIFTKTNEEAEFIYSKLKTKGFKNVALFSSNLSQRERNRLLKKINKSEIIYLITTDL
MSRGMDFPGVTHIVNYSLPIDLTYYKHRIGRTDRNIVKGNIYDIYNDSDIYRYNEIVKKN
PNVNFTKIKLK
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgcatataaactacattaatccatcattaaataaatatttaaattataaaaaatttgaa
aaattattacctatacaaaatattgctatacctaaattgattaagaaaaaaaatcttttt
attgaagctcctacaggaactggtaaaactttaacatttttattacctatattacaaaat
attaattttgacaattttaatactcaagcaataataattgctcctacaagagaattatca
actcaaattcataatgttttaaaagaaataaaaccatttttagattatgaaatcaaatca
cttttagcaattggtggggaagattttaatgatcaagaaagaaaactaaaaaatggaagt
caaataatcattggtactatagatagaataaactctttaagagaaaaaataaatcactct
ttaattgatttaaaatattttattattgatgaagttgacatgatttttaattttgatgca
tttaaaaatattgaagttatatctaaaaaaataccttattgaacaacaatttcatttttt
tctgcttcttttccacttgaacttcaaaatttaattaaaaaaacttttaataaagaaata
gataatataataattaaaaaagatgctcaagataaaatagattctttttttataaaagca
tatgatggtgataaattaaaaactttaatagaacttttaaattcaaatcaatttaatcct
tttttttctttaattttcacaaaaacaaatgaagaagcagaatttatttattcaaaatta
aaaacaaagggattcaaaaatgttgctttatttagctctaatttatcacaaagagaaaga
aatagactattaaaaaaaataaataaatcagaaataatttacttaataactacagattta
atgtctaggggtatggattttccaggtgttactcatattgtcaattattctttaccgatt
gatttaacatactataaacatagaataggtagaacagatagaaatattgttaaaggaaat
atatatgatatttataatgattctgatatttatagatacaatgaaatagttaaaaaaaac
ccaaatgttaattttacaaaaattaaattaaaataa
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