Candidatus Tyloplasma litorale: TYPL_3110
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Entry
TYPL_3110 CDS
T09841
Symbol
pcrA
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
tll
Candidatus Tyloplasma litorale
Pathway
tll03420
Nucleotide excision repair
tll03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tll00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
TYPL_3110 (pcrA)
03430 Mismatch repair
TYPL_3110 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tll03400
]
TYPL_3110 (pcrA)
Enzymes [BR:
tll01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
TYPL_3110 (pcrA)
DNA repair and recombination proteins [BR:
tll03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
TYPL_3110 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
TYPL_3110 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_11
UvrD_C_2
Viral_helicase1
AAA_30
AAA_12
AAA_22
ADDB_N
PhoH
DUF2400
Motif
Other DBs
NCBI-ProteinID:
BDU67658
LinkDB
All DBs
Position
complement(337057..339108)
Genome browser
AA seq
683 aa
AA seq
DB search
MLNLNKNQLKAVKKIEGPLRIIAGPGSGKTRTIVSKIAYILKNNLASPNEILAITFTNKA
TKEISERILEEVGEKLKNVFTYHGWCNSLLRIEHNELNLDRNFVIIDSSDSQSRISNLIK
ENEFIVEKKEAISFFDKISREEIFVKELNDSKIIMENQIATLWEKYNNSKKINGQLDFND
LITEVKKLLTSNENIRKKWMSKYKYIFIDEFQDTNNIQFEIIKSITNENSNITVVGDPDQ
NIYSWRGANIDLINNFNKWFPSSETIMLDQNYRSTPEIINAANNLIQNNKNRVSEFKSSP
TKKHGDPIEWISLKNESEEPYEIVKKIREFKLEGFNYDDMAIIVRSSYKTRPLEMILNAN
SMPYKLIGAQKFYDRKEVKQTLKFLLFASKQSNSNLLDIINDPPKKFGPKKIQKTRIESE
DLGISMWEYLSQNSSSQPLLISNWIKQTKNFIYKIKEDKNLNAISDSLEEYLEEIGYINR
FFDDPDRKDNIKEILNIIQKEIININGITIEDKIIQFYNNATLSSAGDEKTDDGEIKIIT
AHASKGTEFPIVFIFSMNQGHWPSFRSIQVGELEEERRVAYVAMTRAMKKLVITLTNGSS
SYGNSFTEQSIFVNEIIEKSNFRKYKNNENTNHFEFGERVIHSIFGVGTIIGKKNGFVKI
KFDNDDKIHEILSGHKSYKVIKG
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgttaaatttaaataaaaatcaattaaaagctgtaaaaaaaatagaaggaccattaaga
ataattgctggtccaggttctggaaaaacaagaacaattgtttctaaaatagcttatatt
ttaaaaaataatttggcttctccaaatgaaattcttgcaataacatttactaataaagca
acaaaagaaatatcagaacgtattttagaagaagttggtgaaaaattaaaaaatgttttt
acctatcatggttgatgtaattctttattaagaatagaacataatgaattaaacttagat
cgtaattttgtaattattgattcttcagattctcaaagtagaatttcaaatttaattaaa
gaaaatgaatttattgttgaaaaaaaagaagcaataagtttttttgataaaatctcaaga
gaagaaatttttgttaaagaattaaatgattctaaaataataatggaaaatcaaattgct
acattatgagaaaaatataataattctaaaaaaattaatggacaacttgattttaatgat
ttaattactgaagttaaaaaattattaacttctaatgagaatattagaaaaaaatgaatg
tctaaatataaatatatttttatagatgaatttcaagatactaataatattcaatttgag
ataataaaatcaataacaaatgaaaattcaaatataactgttgtaggagatcctgatcaa
aatatatactcttgaaggggtgctaatattgatttgattaataattttaataaatgattt
ccttcttcagaaacaattatgttagatcaaaactatagatctactcctgaaataataaat
gctgctaataatttaattcaaaataataaaaatagagtttcggaatttaaatcatctcca
acaaaaaaacatggtgatcctattgaatgaatatcacttaaaaatgaatctgaagaacca
tatgaaattgttaaaaaaattagagaatttaaattagaaggatttaattatgatgatatg
gcaattatcgttagatcatcatataaaacaagaccattggaaatgattttaaatgctaat
agtatgccatacaaacttattggtgctcaaaaattttatgatagaaaagaagttaaacaa
actttaaaatttttattgtttgcatcaaaacaaagcaattctaatcttttagatataata
aatgatcctccaaaaaaatttggaccaaaaaaaattcaaaaaactagaattgaatctgaa
gatttaggaattagtatgtgagagtatctttcacaaaattctagtagtcaacctttactt
atttctaattgaattaagcagacaaaaaatttcatttataaaataaaagaagataaaaat
ttaaatgctatttctgattctttggaagaatatttagaagaaattggttatataaataga
ttttttgatgatcctgatagaaaggataatataaaagaaattttaaatattattcaaaaa
gaaataattaatattaatggaataactattgaagataaaattattcaattctataataat
gcaactttatcttcagcaggtgatgaaaaaacagatgatggagaaataaaaataattact
gctcatgcatctaaaggaacagaatttcctattgtatttatattttctatgaatcaagga
cattgaccttcatttagatctattcaagttggagaattagaagaagaaagaagagttgca
tatgttgctatgacaagagctatgaaaaaattagttatcactttaactaatggctcttct
tcttatggaaattcatttactgaacaatcaatttttgttaatgaaataattgaaaagagt
aattttagaaaatataaaaataatgaaaatacaaatcattttgaatttggagaaagagta
attcactctatttttggagtcggaacaataataggtaagaaaaatggttttgtaaaaata
aaattcgataatgatgataaaattcatgaaattttatcaggacataaaagttataaagta
attaaaggttaa
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