Temnothorax longispinosus: 139807850
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Entry
139807850 CDS
T10889
Symbol
Dscam1
Name
(RefSeq) Down syndrome cell adhesion molecule 1 isoform X5
KO
K06768
Down syndrome cell adhesion molecule-like protein 1
Organism
tln Temnothorax longispinosus
Brite
KEGG Orthology (KO) [BR:
tln00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tln04515
]
139807850 (Dscam1)
Cell adhesion molecules [BR:
tln04515
]
Immunoglobulin superfamily
Other
139807850 (Dscam1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
fn3
Ig_2
Ig_DSCAM-DSCAML_C
ig
Dscam_C
V-set
C2-set_2
Ig_5
Pur_ac_phosph_N
C2-set_3
Ig_6
Ig_4
Motif
Other DBs
NCBI-GeneID:
139807850
NCBI-ProteinID:
XP_071625381
LinkDB
All DBs
Position
1:complement(3100783..3169783)
Genome browser
AA seq
2008 aa
AA seq
DB search
MWRDPPGGGYKTPIHVVAMLLLVAVLALTTVVSAEDASMGPVFVKEPPNRIDFSNGTGAV
VECQARGNPQPDIIWVRSDGTAVGDVPGLRQVLPNGNLVFPPFRAEDYRQEVHAQVYSCL
ARSPAGSVHSRDVNVRAVVTQPYNPEILTEYVIRGNSAILKCSIPSYIAEFVTVEAWIRE
DGEVYLPADLAVAQDGKYLVLPSGELHIRDVGPEDGYKTYQCRTKHRLTGETRLSATKGR
LVITEPMGAKGPKFSSDDRVNSFIRAAGSASSLHCPAQGFPVPSFRWYKFIEGTSRRQPV
QLNERVRQVSGTLIIREARVEDSGKYLCIVNNSVGGESVETVLTVTAPLTAEIEPSTQTI
DFGRPATFTCTVQGNPIKTISWLKDGKPLGLEDRVLRIESVKKENKGMYQCFVRNDQESA
QATAELKLGGRFEPPQIRQAFAEETLQPGPSMFLKCVASGNPTPEITWELDGKRLSNTER
LQVGQYVTVNGDVVSHLNISSIHTNDGGLYKCIAASKVGATEHSARLNVYGLPFIRHMDK
KAIVAGETLRVTCPVAGYPIESIVWERDTRVLPINRKQKVFPNGTLIIENIERMSDQAIY
TCVARNAQGYSARGTLEVQVMVAPQIAPFAIAEEPANWGDSISVVCAILKGDLPIEITWA
LNGEPIRPERSDVNILATTRKNSILSIESVAARHAGEYTCSASNKAGATSYSATLAVNVP
PRWILEPTDKAFAQGSDARVECKADGFPKPQVTWKRAAGDTPGDYTDLKLSNPDISVEDG
TLSINNIQKTNEGYYLCEAVNGIGSGLSAVILISVQAPPQFEIKLRNQTARRGEPAVLQC
EAQGEKPIGILWNMNNKRLDTKSDPRYTIREEILANGVLSDLSIKRTERSDSALFTCVAT
NAFGSDDTSINMIVQEVPEVPYGLKVLDKSGRSVQLSWAAPYDGNSPIKRYVIEYKISKG
SWETDIDRVLVPGSQQNVAGVYNLRPATTYHLRIVAENEIGTSDPSDTVTIITAEEAPTG
PPTSIKVDALDQHTLKVTWKPPPREDWNGEILGYYVGYRQSSDKPYMFETVDFSKEDIKE
HHLQIANLKTYTQYGVVVQAFNKVGSGPMSEERRQHTAEGVPEQPPHDTTCTTLTSQTIR
VSWVSPPLSAANGVITGYKVIYGPSDTWYDENTKDTKITSSSETILHGLKKYTNYSMQVL
AFTSGGDGVKSAPIHCQTEQDAPEAPIAIKALVMSSESILISWRPPSQPNGVISQYTVYT
KADNAEEPTSQKVPPNQLTHEASGLDKQLRYEFWVTASTNIGEGEASKIVALAPSVRVPA
KIASFDDKFTATYKEDVKLPCLTVGVPAPEVTWKVRGATLQPSDRLRQLPEGSLFIKEVD
RADAGEYSCYVENSFGHDTVTHQLVVHAPPHSPQVTLTATTTNSLTMKLRPHPTDNAPIH
GYTIHYKPEFGDWETVQISSTAQKYTLENLWCGSRYQIYVTAYNGIGIGDPSDILNTRTK
GSKPIIPEAARFIEVSTNSITLHLSAWSDGGCPMLYFVVEHKKKLQQEWNQVSNNVKPGG
NFVVLDLDPASWYHLRVTAHNNAGFAVAEYEFATLTVTGGTIAPPVRNGNENSADVRRYF
PWLPSWLDVNVVVPVGATVVVIIVGIVVICVALSRRTRGPEQTRLRGISSADEKYYEGQY
DVVYQQTGVGGATLDKRRSDLRDELGYIAPPNRKLPPVPGSNYNTCDRIKRGGTGSLRSH
STWDPRRHMYEELSHYAPNRRCPPPPRMGSADGLSHRGMEDEICPYATFHLLGFREEMDP
SKAMQFQTFPHPGNGHSGTMGPPVGHPTNASAHSRSGSQSMPRQNGRYSRVPSQGGGSGT
HNVFSPEYDDPANCAPEEDQYGSQYGQYGAPYDHYGSRGSVGRRSVGSARNIPLSGSPEP
PPPPPRNHQDQNNSSFNDSKESNEISEAECDRDQLVNRNYGVNARGKDGMTTEEMRKLIE
RNEAPGRQTGSPHGGHGGLLTPYDTVAV
NT seq
6027 nt
NT seq
+upstream
nt +downstream
nt
atgtggcgagatcctccaggcggagggtacaagacacccatccacgtcgtcgctatgctg
ctattagtcgctgtcctggcattgacaacggttgtttcggctgaagatgcatctatggga
ccggtgtttgtcaaggagcccccaaaccggattgatttctcaaacggaaccggagccgtc
gtcgaatgccaggcaagaggaaacccacaaccggatatcatctgggtccgttccgatgga
actgctgtgggagacgttcccggattgcgacaggttctgccaaacggaaatttggtgttc
cctcctttccgcgctgaagattaccgtcaggaagttcatgctcaggtctacagctgtttg
gcacgttcccctgcaggttcagtacacagccgtgatgtcaacgtgagagccgtcgtcact
caaccttacaatccggagatcttgaccgaatacgttatcaggggaaacagcgcgatatta
aaatgcagcatccccagttacatcgcagaattcgttactgtcgaggcgtggattcgcgaa
gatggagaggtttaccttccagcggatcttgcggttgcgcaggatggaaaatacttggta
ctgccatccggagagctgcacatcagggacgtcggacccgaagacggatacaagacttac
caatgccgcacgaagcaccgactcaccggcgaaactaggctatccgcaacgaagggtcgt
ctcgtcattactgagccgatgggagcgaaggggccgaaattctcgagtgacgatcgcgtc
aactcgtttatacgcgccgcgggaagcgcatcgagcttgcactgtcctgcgcaggggttc
cccgtaccgtcgttcagatggtacaagttcattgagggcacgtcgaggcgtcagccggtc
cagctgaatgagcgcgtacgtcaggttagcggcactctgatcatccgcgaggctcgagtc
gaagattccggcaaatatctctgcatcgtcaacaattccgtcggcggcgaaagtgtggag
accgttttgactgttacggcacctctgaccgcggaaatcgaaccgagtacgcagaccatc
gactttggaagaccagcgaccttcacctgcaccgtccaaggcaatccgatcaaaactatc
tcctggctcaaggatggaaagcctcttggattggaagatcgcgtgctgaggattgagagt
gtgaagaaggaaaacaagggaatgtatcaatgcttcgttagaaatgatcaagaaagcgcg
caagcaacggcggaattaaaacttggtggaagattcgagcccccgcagatccgtcaagct
ttcgccgaagagactcttcagccgggaccgagcatgtttttgaagtgtgttgccagcgga
aatcccacccccgaaattacctgggaacttgatggaaaacggttgtcgaataccgagaga
ctgcaagtgggacaatacgtgacggtcaatggtgatgtcgtgtcgcatctgaatatttcg
agcattcataccaatgatggtggtctctacaagtgcattgctgcgtcaaaggttggagct
accgagcattctgcccgtctcaacgtttatggtttgccgttcattcgtcacatggacaag
aaagccatcgttgccggggaaactttgcgtgtgacttgccctgttgctggttacccgatc
gaaagcatcgtctgggaacgagacaccagggttctgccaatcaaccgaaagcaaaaggtc
ttccctaatggtacactcatcatcgagaatattgaacgaatgagcgaccaggcgatctac
acttgcgtggcacgcaatgcacaaggttacagcgcacgtggaactttggaagttcaagtc
atggtcgcaccgcaaatcgcaccgttcgctatcgctgaggaaccagccaactggggcgat
tccatttccgtggtgtgcgccatcctcaagggtgatttaccgattgagatcacgtgggcg
ttaaacggcgagccgatccggccagaacgttcggacgttaatatcctggcgacgacgcgg
aagaatagcatcctcagcatcgagtccgtggccgcgagacacgcaggagaatacacgtgc
tcggcgtcgaataaagccggagcgaccagttattcagcgactttagctgtgaacgtacct
cctcgttggatcctggaacctaccgataaggcatttgctcaaggatccgatgcacgagtg
gagtgcaaagccgacggattccccaagcctcaagtcacatggaagagagctgctggggat
acgccgggagattataccgacttgaaattgagcaatcctgatattagcgtggaagatggc
accctctctattaacaacatacaaaagacgaatgaaggctattatctttgtgaggctgtt
aacggcattggatcagggttatcagctgtcattctcatttcggttcaagctcctccgcaa
tttgaaattaaactgaggaaccagaccgctcgtcgtggagaaccagccgtattgcaatgc
gaggcgcaaggagagaaaccaatcggtattttatggaacatgaacaacaagagattggac
acaaagagcgatcctcgttacactattcgcgaagaaatcttggccaacggagtattgtcc
gacctgagcatcaaacgaaccgaaaggagcgattctgccttgttcacttgcgtagccacg
aatgccttcggtagcgatgatactagcattaacatgattgtacaagaggtgccagaagtt
ccttatggtctcaaagtgttggataaatcaggacgttcggtgcaattatcgtgggctgca
ccttatgacggaaatagtccgatcaaacgatacgttatcgagtacaagatcagcaagggt
tcctgggaaactgatattgaccgggtgctcgtacctggctcacaacagaacgtagccgga
gtgtacaatctaagacctgcgaccacctaccaccttcgaatcgtcgctgagaacgaaatt
ggcacatctgatccgtctgacacggtcactattatcaccgctgaggaagcacctactggt
ccgccaacttccatcaaagtggacgctctcgatcagcatacgctcaaggtaacatggaaa
ccgcctccgcgcgaggactggaacggtgagattctcggctactacgttggatacagacag
tcgtcggacaagccgtacatgttcgagaccgtcgatttctccaaggaagacataaaggag
caccacttgcagatcgcgaacctcaagacttacactcagtacggcgtagtcgttcaggca
ttcaacaaggtcggctccggaccaatgagcgaggaacgcaggcagcacactgcagaaggc
gtgcccgagcaaccgcctcatgacactacttgcactactcttacctctcagactatcaga
gtgtcctgggtgtcgccgccactcagcgcggccaacggcgttatcaccggatacaaagtt
atctacggaccgtccgacacgtggtacgatgagaatacgaaggacaccaagatcacgtct
tccagcgagaccattttgcacggcctcaagaaatacacaaactacagcatgcaggttctg
gctttcacatccggcggagacggcgttaagtccgcaccgattcactgtcagaccgagcag
gatgcacccgaagctcccatcgctatcaaagctctagtcatgtcttcggagtctattctt
atctcatggcgtccacctagccaacctaacggagttatttctcaatataccgtttacaca
aaagctgataacgcagaagagccgaccagccagaaagtaccaccgaaccaattaactcat
gaagcatctggattagataagcaactcagatatgaattctgggtgaccgctagcacgaat
atcggcgaaggtgaagcttccaaaatagtggccttggcaccaagtgttcgagtaccggcc
aagattgcatcgtttgacgacaagttcacggcaacatacaaagaagacgtcaagttgcct
tgtctcactgtcggcgtacccgcaccggaagtaacatggaaggtacgaggcgctactctt
cagccgagcgaccgactgagacaattacccgagggatcgctattcatcaaggaagtcgac
cgcgcggatgctggggaatactcttgttacgtggaaaactcctttggacacgacaccgtg
acccatcagctggttgtacacgctcctccgcactcgccgcaggtcactcttaccgccacc
accaccaactctttaacgatgaagttacgccctcatcccaccgacaatgcaccgattcat
ggctacacgattcattacaaacccgagtttggcgattgggaaaccgttcagatcagctcc
acggcacagaaatatactctcgagaatctgtggtgcggctcccgatatcagatctacgtc
acagcttacaacggaattggaatcggcgatccttcagacatcctgaacacgcgcacaaag
ggctccaaaccgatcatccccgaagcggcgagattcatcgaggtatccacgaacagcatc
actctgcacttgagcgcctggtcggatggtggctgccccatgttgtacttcgttgtcgaa
cataaaaagaagctgcagcaggaatggaaccaggtttcgaacaacgtcaagccgggcggt
aattttgtagtattagatttggatcccgctagctggtaccatttgcgcgtcacagctcac
aacaatgccggtttcgccgtggctgagtacgaattcgcgactttgacggtgactggcggc
acgatcgcacctcccgtacgtaatggtaacgaaaactccgcggatgtgagacggtacttc
ccatggttacctagctggctcgacgttaacgtggtggtgccggtcggcgcgacggttgtt
gtcataatagtaggaatagttgtcatttgcgtggcgctctcgagacgaactcgaggcccg
gaacaaacacggctgcgaggtatctcttcagccgacgagaaatattacgagggacaatac
gacgtagtctatcagcaaaccggagttggcggcgctaccctggacaaacgcagatccgat
cttcgcgacgaactgggatacatcgcaccaccgaatcgcaagcttccacccgtacccggg
tcgaactacaacacctgcgatcgtatcaagcgaggtggaactggctcgttaaggagtcac
tcgacgtgggatccaaggcgacacatgtatgaggaattgagtcactacgcgcccaacagg
agatgcccaccgccaccacgtatgggcagcgcggacggtctttcgcacagaggtatggag
gatgagatttgcccatacgctaccttccatctattgggattccgcgaggaaatggacccg
agcaaagctatgcaattccagactttccctcatccaggaaatggccactctggcactatg
ggaccaccagtgggacatcccactaacgcttctgctcatagccgctctggatctcagtct
atgccccgtcaaaacggccgctactctcgagtaccatcccaaggaggcggcagcggcacg
cacaatgttttctcacctgaatacgacgatccggctaactgcgctcccgaggaagaccag
tacgggtcacaatacggacagtacggcgcaccttacgatcactacggatctcgcggatcg
gtcggacgtcgcagcgtaggctcggctcgcaacattcccctctctggctcgccggaaccg
cccccaccgccgccgagaaaccatcaggatcagaataactccagcttcaacgacagcaag
gagagcaacgagatcagcgaggccgaatgcgatcgtgatcagcttgtcaaccgcaactac
ggcgtgaatgctcgcggcaaggacggcatgaccaccgaggagatgcgtaaactcatagag
agaaacgaagctcccggccggcaaaccggcagcccccacggcggtcacgggggactcctc
acaccctacgatactgtggcagtgtaa
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