Temnothorax longispinosus: 139808080
Help
Entry
139808080 CDS
T10889
Symbol
Ge-1
Name
(RefSeq) enhancer of mRNA-decapping protein 4
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
tln Temnothorax longispinosus
Pathway
tln03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tln00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
139808080 (Ge-1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tln03019
]
139808080 (Ge-1)
Messenger RNA biogenesis [BR:
tln03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
139808080 (Ge-1)
mRNA degradation factors
5'-3' decay
Decapping complex
139808080 (Ge-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40
WD40_WDHD1_1st
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_WDR90_POC16_2nd
PhoU
TOR1L1_C
Syntaxin
Motif
Other DBs
NCBI-GeneID:
139808080
NCBI-ProteinID:
XP_071625810
LinkDB
All DBs
Position
2:complement(8682748..8688613)
Genome browser
AA seq
1090 aa
AA seq
DB search
MPERDTAGDMSKSGEGNLRHLHFQQTVEFTGREDQHSVELCSTNVTIIPSPGDHDHGSSK
VKLKNIVDFTWDHHLYTGQLLAVHVSGKYLAYGLKVSAGGGVIRVVYKELEHRALLRGMR
GAIQDLAFAHVSNAILACIDYTGSLFIHTIEPTPSELLCSLVLQVDAEDVSPTSHRVIWC
PYIPEDDASDGDEVSKLLVLTRGSKVELWSVATIASRFRSVEATDPSIKETGGMMEIDQH
SGTIVEATLSPDGTALATASTDGEVKFFQVFLHNNSHNGQPQPRCLHQWRPHGGRPISCL
FFLDDHKNYQPDVQFWRFAVTGCDNNSELKVWSCELWTCLQTIKFAPNPSTGKVPVLKAG
LDLSAGYLFLSDIYNKILYVLSLSKDKGEALACISTVSEFLLPYPILSFGIVEADQRKIR
STGESLEDLCEEIEENDEQLVIYMYLVQPKSLQECHIAFKPASQGSGNYLIGTRTHDSLD
YSEDMPDMGTAAHNGMSEENCEGERSLSTTTETIINHSGGGLNLMTPDAFSSPAKKENNE
LESDPESPDLRKVLSSSPIAQAVQALNASDPPLVKNEIEEQTPASCGSSPSREVREILSL
SKPDEETDIDGKPETKTNADEDWSNIPMVLLKDVSVHAMQESEEFPEDDENNVQRQKTKD
EPKTSLPTDDPGTLWRTNNDINNLEINNKLKSILEIVQDQCQELKELRAEVTRLQQESPV
TTQIESALTRMSQQHNASLEQTLYDQMTRQHEFLNTFETTIKDKIESTLPRTVEDTIKPL
KHQMRLDANQMDEHFQKNISELISSSHVKDTLSLTAANAAKPALDAAFKEAFTTVLLPNM
EKICQIMFKQIQEAFIKGTREYLQHIDTIIDKQYQRHNEQLSEMLSTLVREEMQAELNRV
LTTIQDGTIRTIRDSIRENLNQQLTEISSARSRATTPAIPVTAVADAQARVMSLLQRGQL
NAAFQQALSASDLGLVVLVCEKTEPSRVFSCNGAPGQASRCILQQPVILSLVQQLSADLG
HRTELKHRWLEEAILNLDPSDPVTREHMGTVLMTLQNQIATFVASNPNHRSTRRMKMLAM
ATRALLNQHP
NT seq
3273 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaaagggacacggctggcgacatgagcaagtccggggaaggcaatctgaggcat
ctccactttcagcagacagtggagtttactggacgggaggatcaacattcagttgaattg
tgtagcacaaatgtgaccattatcccttctcctggtgatcacgatcatggtagttctaaa
gtaaagttgaagaacattgttgatttcacatgggatcatcatctttataccggccagttg
ttggccgttcatgtatctggaaaatatttagcctatggtttaaaagtcagtgccggtggt
ggggtaattcgtgttgtatacaaggaattagaacatagagctctgctacgaggaatgcgt
ggtgctattcaagatcttgcgttcgcccatgtttcaaatgcaattcttgcgtgtatcgat
tatacaggatcactttttatacacacaattgaacctacgccgtctgaattattatgtagt
ttagtattacaagtagacgcggaagacgtttctccaactagtcaccgagtgatctggtgt
ccgtacatcccagaggatgatgcctctgacggagacgaagtatcaaaattattagtccta
actcgtggttccaaggttgaattgtggtcggttgcgacgatagcgtcaagatttagatca
gtagaggcaacagatccaagtattaaagaaactggtggcatgatggaaattgatcaacac
tcaggaactattgttgaagccacacttagtccagatggcaccgcattagcaactgctagt
acagatggagaagtgaaattctttcaagtcttccttcataataattctcacaacggccaa
ccgcaaccacgttgtttacatcaatggaggcctcatggaggacgacccatttcttgccta
tttttccttgatgatcataaaaattatcagcctgatgttcaattttggagatttgctgtg
acggggtgtgacaataattcagaactaaaagtatggtcatgcgaattgtggacttgttta
caaacaatcaaatttgctccaaatccttctacgggcaaagtgccggtactaaaagcgggc
ttagatcttagtgctggatatctatttctatcagacatatataataaaattttatatgta
ctaagtctttcaaaagacaaaggtgaggcgctagcatgcataagcacggtatcagagttt
ctcctgccatatccaattctaagtttcggaattgtcgaggccgatcaacgtaaaatacgg
tcgaccggcgaatcactggaagatctatgtgaagagatcgaagagaacgatgaacaactt
gtcatttatatgtatctagtccaaccaaagtcgttacaagagtgtcacattgcctttaaa
cctgcctcacaaggaagtggcaattatcttataggtacacgtactcacgattcgctggat
tattctgaagatatgccagatatgggaaccgctgctcacaatggcatgtccgaagagaat
tgtgagggagaacgatctttatctaccacaaccgaaacgataattaatcatagtggtggt
ggcttaaacttaatgacgcctgatgcattcagttcgcctgcaaaaaaagagaacaacgaa
ttggagtctgatcccgaaagtccagatttgaggaaagtcttgtctagtagtcctattgca
caagcggtacaagctttgaacgcatctgatccgccactcgtgaaaaacgagatagaagag
caaactcctgccagttgcggtagcagtccatctagagaagtaagagaaattttgtctctt
tctaaaccagatgaagaaactgatatcgatggcaagccggaaacgaaaacgaacgctgat
gaggattggtctaatatcccaatggtcctgcttaaggacgttagtgtgcatgcgatgcaa
gagtcggaagaatttcccgaagatgatgagaataatgttcaaaggcagaagacgaaagat
gaaccgaagacgtctcttcctaccgatgatcctggaacattatggcgaacaaacaacgac
atcaataatctcgaaataaacaacaaattgaaatctattttagagatagttcaggatcag
tgtcaagagttaaaagaattacgcgcagaagttactagattgcaacaagaatcgccagta
actacgcaaatagaatccgcattgacgagaatgtctcaacagcataatgcaagcttggaa
caaactctatatgatcaaatgactcgtcaacatgaatttctaaacacatttgagacaacg
atcaaagacaagattgaaagtaccttgccgcgtacagtcgaagatacgataaagcctttg
aagcatcaaatgagattagacgcaaatcaaatggacgaacattttcagaaaaatatatct
gaattgataagcagttctcatgtaaaagataccttatctttgacagctgcaaatgcagct
aaaccagctctggatgctgcttttaaggaagcattcacaactgtccttttacctaatatg
gaaaaaatttgccaaattatgtttaagcaaatccaggaagcttttattaaaggtactcgc
gaatatctacaacatatcgatacaatcatcgataaacagtatcaacgtcataatgagcag
ctaagcgaaatgttatcaacattagtacgcgaagaaatgcaagctgaattgaatagagtt
ttgacgacgatacaagatggtactattcgaacaattcgtgattccatacgagagaatctg
aatcagcaacttacagaaatttctagtgcgcggtcaagagctacaacacctgctatacct
gtaaccgctgtagctgatgctcaagcgcgtgtcatgtccctccttcaaagaggtcaactg
aacgcagcttttcaacaagctctgagtgcaagtgatttaggattggtagtactagtgtgt
gagaaaacagaaccttcgagagtattttcgtgtaatggagccccaggacaagcctcaaga
tgcattttgcagcaacctgttattctttctctcgtacagcaattatctgctgatttaggg
caccgtacagaattaaaacacagatggctggaggaagcaatattgaatttggatccaagt
gatccagtaacacgagaacatatgggcacggtgctaatgactctacaaaatcaaatagct
acgtttgtagcgagtaatccgaatcatcgatcgacgcgccgcatgaaaatgctcgctatg
gctacacgtgcactattaaatcaacatccttga
DBGET
integrated database retrieval system
