KEGG   Temnothorax longispinosus: 139808127
Entry
139808127         CDS       T10889                                 
Symbol
Taf5
Name
(RefSeq) transcription initiation factor TFIID subunit 5
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
tln  Temnothorax longispinosus
Pathway
tln03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:tln00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    139808127 (Taf5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tln03021]
    139808127 (Taf5)
   03036 Chromosome and associated proteins [BR:tln03036]
    139808127 (Taf5)
Transcription machinery [BR:tln03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     139808127 (Taf5)
   Coactivators
    SAGA/TFTC/STAGA complex
     139808127 (Taf5)
Chromosome and associated proteins [BR:tln03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     139808127 (Taf5)
    STAGA complex
     139808127 (Taf5)
    TFTC complex
     139808127 (Taf5)
    SAGA complex
     139808127 (Taf5)
    SLIK complex
     139808127 (Taf5)
SSDB
Motif
Pfam: WD40_Prp19 Beta-prop_WDR5 WD40 Beta-prop_WDR3_1st Beta-prop_THOC3 WD40_CDC20-Fz TFIID_NTD2 Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_2nd WD40_Gbeta EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd WDR55 Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_1st Beta-prop_WDR36-Utp21_1st Beta-prop_EML Beta-prop_WDR75_1st Beta-prop_Aladin NBCH_WD40 Beta-prop_IFT122_1st Beta-prop_TEP1_C Beta-prop_SCAP Beta-prop_RIG_2nd ANAPC4_WD40 Beta-prop_WDR41 Beta-prop_IFT140_1st WD40_RFWD3 WDR90_beta-prop_4th Beta-prop_EIPR1 Beta-prop_DCAF4 Beta-prop_WDR19_1st Beta-prop_SPT8 Beta-prop_VPS8 Tricorn_2nd Beta-prop_DCAF12 Beta-prop_HPS5 Beta-prop_RIG_1st Cytochrom_D1
Other DBs
NCBI-GeneID: 139808127
NCBI-ProteinID: XP_071625893
LinkDB
Position
2:2942753..2946455
AA seq 652 aa
MDNEKSTMIAVLQLLKKYNFKGTEELFRKEANLTDVSIDDAQQSDSDVTSVLSAYKSEGD
PAQYEKAYSELKKFVEGALDIYKHELGTILYPVLVHMYLELVYNNHSKEAKQLMEKFSGN
LEEYYQDDLKRLSNVTKREQMAGNELTDTFKSNQFIIRMSRDTLSILKRHLQEKKYSVLL
NIIQEHLYFDMYEGVARNKQQIEATSGALVGEATRQDNKAKVFYGLLKEPDIQPPAEEEE
KCDDTGGGDGDKPKKKKVKKDPLFSKKTKSDPNAPPVGRMPLPNLKDADKLEKIKALREA
SKRVVLGPDTLPSICFYTMLNTTYTITAAEIAEDSSLLATGFSDSGIKVWSLLPQKLRMM
KTGEQLQDITREAEDVLVRMMDERTSETVRHLYGHSGPIYSLSFSPDRNLLLSSSEDTTI
RLWSLHTWTCVVCYKGHLFPVWCVRFSPHGYYFASASNDKTARLWATDSHQPLRIFAGHY
SDVDVIQFHPNSNYVASGSSDMTVRLWDCVTGSQVRLMTGHKEPIFSLVFSIEGRFLASA
GADHRVLMWDLAHGHLVAALSGHTANIHCLSFSRDGNILVSGSLDYTLKLWDFTKLAEEM
SLEDVNVSHNPDVKTNSESYLLRTFPTKNTSVLALHFSRRNLLLGVGMFDSG
NT seq 1959 nt   +upstreamnt  +downstreamnt
atggataacgagaagagtactatgatcgctgttttgcagcttttgaagaagtataatttt
aagggaaccgaggaattgtttagaaaggaagctaatctcaccgatgtctcgattgacgac
gcacagcaatctgattccgacgtgaccagcgtcctttctgcttacaagagcgagggagat
cctgcgcaatatgagaaagcatacagtgaattgaaaaagtttgtggaaggagctttggac
atttataagcatgagttgggaaccatattgtatccagttttggtgcacatgtatttggaa
ttggtttataataatcattccaaagaggcgaagcaactcatggagaagttcagtgggaac
ttagaagagtattatcaggatgacttgaagagattgtccaacgtaacaaaacgagagcaa
atggcagggaatgaattaactgacacttttaaatctaatcagtttataatcagaatgtcg
agggataccctttcgatactaaaacgacatttgcaagaaaagaaatatagcgttttacta
aacatcatacaggagcatctttactttgatatgtacgagggcgttgctcgcaataaacaa
cagatagaagcaacgtctggagctctggtgggagaggctaccaggcaagataacaaggcc
aaagtattttatggacttctgaaggaacctgatattcagccacccgccgaagaagaggaa
aagtgtgatgacacaggtggtggagatggagacaagccgaagaagaaaaaagtaaagaag
gatcctttgttttcaaagaagacaaaatctgacccgaatgcaccaccagtgggcagaatg
ccgttgcctaatctgaaagatgcggataaactggaaaaaattaaggcactgagggaagca
tcaaagagagttgttcttggacctgacacattaccatctatatgtttttatacaatgttg
aacactacttatactataacggcggcggaaatagcagaagactcaagtttattagctacc
ggatttagtgattctggcataaaagtatggagtctacttccacaaaaactgaggatgatg
aaaacgggcgaacaattacaggatattactagagaagcagaggacgtattggttagaatg
atggatgaacgaacatctgaaactgtgagacatctctatggccatagtggaccaatttac
agtctttcatttagtccagatagaaatctactgctttcatcatcggaggatactacaata
aggctatggtcactgcacacatggacatgcgtcgtctgttacaaaggtcatctatttccc
gtatggtgtgtaagattctcaccgcatggttattactttgcaagcgcatcgaatgacaaa
actgccagattatgggcgactgattctcaccagccattacgaatatttgctggccattat
tcagatgttgatgtaattcaatttcatccaaattcgaattatgttgcaagcggttcaagc
gacatgactgtaagattatgggattgtgtaactggcagtcaagtccgattgatgactggg
cataaagaaccgattttttctttagttttctcaatagagggtcgatttttagcttcagcc
ggtgcggatcatcgtgtcctcatgtgggatttagcacacggccaccttgtcgctgcctta
tccggccacacggctaatattcactgtctatcgtttagtcgagatggcaatattctagtc
tcaggttccttagattacacactgaaattatgggacttcacaaagttagcggaagagatg
agcttggaagatgtcaatgtttcgcacaatccagatgtaaaaactaactcggaatcttat
ctactgcgtacctttccgacgaaaaatacatctgtcctggcgctacatttttcacgtaga
aatttactgctaggcgtcggcatgttcgactcgggataa

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