Temnothorax longispinosus: 139808230
Help
Entry
139808230 CDS
T10889
Symbol
Acn
Name
(RefSeq) uncharacterized protein Acn isoform X1
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
tln Temnothorax longispinosus
Pathway
tln03013
Nucleocytoplasmic transport
tln03015
mRNA surveillance pathway
tln03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tln00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
139808230 (Acn)
09122 Translation
03013 Nucleocytoplasmic transport
139808230 (Acn)
03015 mRNA surveillance pathway
139808230 (Acn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tln03019
]
139808230 (Acn)
03041 Spliceosome [BR:
tln03041
]
139808230 (Acn)
Messenger RNA biogenesis [BR:
tln03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
139808230 (Acn)
Spliceosome [BR:
tln03041
]
Complex C
Other components
EJC/TREX
139808230 (Acn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSB_motif
Extensin_1
RRM_1
ASFV_J13L
Motif
Other DBs
NCBI-GeneID:
139808230
NCBI-ProteinID:
XP_071626084
LinkDB
All DBs
Position
2:5966787..5972545
Genome browser
AA seq
943 aa
AA seq
DB search
MEAMCVGMRRKSERNKAKGSPEKKVEKPTRKSTRRRGRRSPSTSSEQETFVVEDVTKSAV
QLKEIEKETSVQTRLQSKEVEQTPQGREEKVSSSEVDIKVDSPEDEEDNGGSVWKVARAD
ASPGEIQKLKLCRQRNTSEPSSDTPPSSRKGVKSSSKWQGSGEGVAEEADSADEQLVSCT
RTLSNAEQPNDPSSSYPGQDSNEEVSDSKEILPETTSANLLSDDKPNIDQHGESNEANCA
AQIVDIEPGKPGSTTPVPTPSANDEETTVAVIVKEDKPVEAEAVEAEPVAAEPVEAEPVE
AEPVEAEPVEDKPVEDKPMEDKPVEDKPMEDKPVEDKPMEDKPMEDKPVEDKPVEDMSEK
STEISVKETNVENVRRDTSSEDEEEEEEEDKAKTHRPVDSSSDSNDESRTKRSRTSSDRT
SPRTIRRKHRNKYRDSSNSETPDSEDEPKRKISETYVEEEEEEEEKPSIEYSQENDKEQS
VSPERTNSHSNNVEKIEIEHSETVEDKSEENIITEKLEQSTPASTQVVAHKPVKVNLKRS
FSTRILSEKNEVKRNDADASLDNESNSQNKENGNEQEPKCVPRKRRWGTALSTDTAPSFS
ISTDSLKALVPGAKPLSINEVRLSKDDDEDRDRHRSNDKRHNSSDITNDKATDENLKNGA
TKKGNGKIDNHIAARRKISIVKEMPHIKSPSPPASKPTNILLIKNLVRPFTLNQIKELLS
RTGTIVENGFWMDRIKSKCIVEYSNEDQAFETRQALHGISWPMSNPKKLHVEYATKEDME
TARESSKEQPVARKTEPLSSDSWQQDWSRDEKTNMTKVTVVREWDLGKEDGQQHIREKER
EKKDHDKKRRVRSRSPTLDAHLSAPARKFKKKEDDPPPAKLLDDLFRKTKATPCIYWLPL
TNEQIVVKEEMRRQHMAEHARRLEEMRRADRNRDGRRRRSPRK
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atggaggcaatgtgtgtaggtatgagacgcaagagtgaaaggaacaaagcgaagggatct
ccagagaagaaagttgagaaaccgacgaggaagtcgacacgcaggcgtggcaggagatcg
ccttccacttcgtccgagcaagagacttttgtcgtcgaggatgtgaccaaaagtgccgtt
cagctcaaggagatcgagaaggaaacaagcgtgcagacacgtctgcagagcaaggaagta
gagcaaacgccacaggggcgtgaggagaaggtctcctctagcgaggtagacataaaggtg
gactcacctgaagacgaagaggacaacggcggctcggtatggaaagtagcgagagcggat
gcgtcgcccggcgagatacagaagttaaaactatgtaggcagcgcaacacgtcagaacca
tcatcagacacaccaccgtcgagtaggaaaggtgtcaagtcaagtagcaagtggcaagga
agtggtgagggcgttgcagaggaggctgactcggcggatgagcaactggtttcttgtaca
agaacgctcagtaatgctgaacagccgaacgatccctcctcttcatacccaggtcaggac
tccaacgaagaggtaagtgatagcaaggagatcctgcctgaaaccacttcagccaacttg
ttgtctgacgataaaccaaacatagatcagcatggtgaatcaaatgaggcaaattgcgct
gcccaaatcgttgatatcgaacctggcaagccgggtagcacgacacccgtgccgactcct
agcgcgaacgatgaggaaaccaccgtcgctgtcatcgttaaggaagataaacctgtggaa
gccgaagctgtggaagccgaacctgtggcagccgaacctgtggaagccgaacctgtggaa
gccgaacccgtggaagccgaacctgtggaagacaaacccgtggaagacaaacccatggaa
gacaaacccgtggaagacaaacccatggaagacaaacccgtggaagacaaacccatggaa
gacaaacccatggaagacaaacccgtggaagacaaacctgtggaagacatgagtgaaaag
tcaacagagatctctgttaaagagactaacgtggaaaatgttcgtagagatacaagtagc
gaagatgaggaggaggaggaggaggaggataaagcgaaaacgcatcgtccggtggactcg
tcatctgattcaaacgacgaatcgcgcactaaaagaagcagaacaagtagtgaccgaacg
tcaccacgtacgattcgcagaaaacatagaaataaatacagagattcgtcgaattcagag
acacctgattccgaagatgaacctaagagaaagatctctgaaacttatgtggaggaggaa
gaggaggaggaggaaaaaccgagtatagaatactcgcaagagaatgataaagaacaatcg
gtgtcgccggaaagaacaaactctcattcaaataatgtagaaaagatagaaatcgagcat
agtgaaactgttgaagataaatcggaagaaaatataataactgaaaaattggaacagtct
acaccggctagcactcaggtggtcgctcataaacccgttaaagtcaacttgaagagatca
ttctcaacaagaatattatctgaaaagaacgaggtgaaaagaaacgatgctgatgcaagc
ctcgacaatgaatccaatagtcaaaataaggaaaatggcaatgaacaagagccaaaatgt
gtgccgaggaaacgtcgatgggggactgcgctttccacggataccgcgccctcgttttct
atctcgactgattcgctcaaggcgttggtgccaggtgcgaagccattatccatcaatgaa
gttcgtctctctaaggacgatgacgaggacagagatcggcataggagtaacgataaacgg
cacaattcgagcgacattacaaatgataaggcaacggatgaaaacttgaaaaatggtgct
accaaaaagggcaatggaaaaatagataatcacattgcggcgaggcgaaagatatcgatc
gtgaaggagatgccacatataaaatcaccaagtccaccagcgtctaaacctaccaatatt
cttttgatcaagaatttagttcgccctttcacactaaatcagatcaaggaacttctttcg
cgtactggcaccatcgtggagaacggtttctggatggatcgaattaaatctaaatgcatt
gtcgaatattccaatgaggatcaggcctttgagacaaggcaggcgcttcacgggatctct
tggcctatgtccaatccaaagaagcttcatgtggaatatgctacaaaggaggatatggag
accgctcgggaatcgtccaaggaacaaccggttgctcgtaaaaccgagccgctctcttcg
gattcgtggcagcaggattggagtcgcgacgagaagactaatatgactaaggtgaccgtg
gtgagagagtgggatttaggcaaggaggacggccagcaacacatcagggagaaggagcgt
gagaagaaggaccatgataagaagcggcgagtgaggagtcgcagcccaacattggacgcc
catctatcggcaccggcccgcaaattcaagaagaaggaggacgatccacctccagctaag
cttctggacgatctctttagaaagacgaaggcgacaccctgcatatactggttgccgctt
acaaatgaacagatagtcgtgaaggaggagatgcgacggcaacatatggcggaacatgcg
cgcagattagaagagatgagacgtgctgacagaaacagggacggccgacgtcgacgtagt
ccgagaaaatag
DBGET
integrated database retrieval system
