Temnothorax longispinosus: 139808338
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Entry
139808338 CDS
T10889
Name
(RefSeq) uncharacterized protein isoform X1
KO
K11583
serine/threonine-protein phosphatase 2A regulatory subunit B''
Organism
tln Temnothorax longispinosus
Pathway
tln03015
mRNA surveillance pathway
tln04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
tln00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
139808338
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
139808338
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tln01009
]
139808338
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tln03019
]
139808338
03036 Chromosome and associated proteins [BR:
tln03036
]
139808338
Protein phosphatases and associated proteins [BR:
tln01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
139808338
Messenger RNA biogenesis [BR:
tln03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
139808338
Chromosome and associated proteins [BR:
tln03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
139808338
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_13
P2R3B_EF-hand
EF-hand_7
EF-hand_5
EF-hand_6
EF-hand_1
Sulfotransfer_2
Motif
Other DBs
NCBI-GeneID:
139808338
NCBI-ProteinID:
XP_071626318
LinkDB
All DBs
Position
1:2381381..2403586
Genome browser
AA seq
1229 aa
AA seq
DB search
MPAVTIISQQSSRTSSSLLSAEVAELHQSSLSSSPSSSLSWGCQVYATRRNLFVSAIVDS
RPSKAVHCPNLNACLVNESRSEYVRVNCQTAHFGYAIPINIVPVRENPELVELVLDQSVE
LSGRLVNFLLDHHPQLRQQEQRSYDMAATAKHDLRRKFPADTSASGEEDIAAIAKQISDH
AEAIYQTWKSRGLAPTEILTCHSNTTAADKFGSALTPCNSPAVTGNNIGGKTSPSLEHSS
PTTVDILTQTPNLDNGNLEKLVNNFVVEDKARIAASKQRSPSKLPSSIQFALQKFERNST
QQQQTAAAKNNIIADNSKKLTSVLLTPTSSFLNKPSQIVKPQVPAKTPGSHHREVFLETI
ETTFPVDLTSSNKPAQQKRPTSTLIASSPADSLNVNSSAGSGLTTWPLKNKLNDAKRIAD
VSRASAKSPQQEDVAKTLPAQDDKRSVITGMNSRCAYLDEVAREEERLINALKTGAVITE
EPERTMASLRARQKPAVKQEKPKVEPVKQIIIGGHNYHGNSSMVSNSGASSSTANISNIG
NAVTAATVSTDRPDGGASANDTKSLSKDDLSAMSTIDYAKVRYQAAQQNPPTQQRLEEQR
ASNNPYNNSTTEQLVSNARTKFEMEIRKDKDTKSTDKDPVTSRWGPRITSPRPRLEQAVP
HPELTSQQKQHIRTAAATGTGNNPVRPFLTRGSVAERVLIFEKCPSELLLDKRGPRQPAI
NTWRGGHEVQNKAQTYSKEKTQQKSLPPHTTLQRQVKGNRNVLIPRFYFPGGKPLPLSQI
ETIISKITAAFQSLPNCRASRAQFHTITKACDLPLYWKIPLFLAAGGEQKGFVEMNVFLE
FWKELTATHHDTASKFINIVTRGLRNSILPEDLIPLVQDVVETHPGLTFLKEATEFHSRY
VHTVIARIFYCVNRSWSGKISIAELRRSNLLAVIIVLEHEEDINQVTAYFSYEHFYVIYC
KFWELDRDHDLFIDKIDLTRHNDHALSTRMIERIFSGAVTRGGKAKNNNNSQQPEDKMSY
TEFVWFLLSEEDKNHPTAIEYWFRCMDLDGDGYLSMYELEYFYEEQLRRMEAIGLETLPF
EDCLCQMLDMIHPVIPGKISLNDLKKCKTTSIFFDTFFNLEKYLDHEQRDPFASTRDHDA
DGHELSDWDRFAAEEYELLVAEESGNEQQEQMLHNVVSWKLSPSDILIDNSDIASDSNSL
MNSLDIHMQQSKHDDSGDTDTDDYADSDN
NT seq
3690 nt
NT seq
+upstream
nt +downstream
nt
atgccagcggtaacaataatatctcagcaatcctcaagaacatcttcatccctgttgtca
gccgaagtagcggagctgcatcaatcgtcattatcgtcgtcgccgtcgtcgtcgttgtcc
tggggttgccaggtctacgcgacacgacgcaatctcttcgtatcagcgattgtcgattca
cgtccgagtaaagcggtgcactgtccaaatttgaacgcctgcttggtgaacgagtcacgt
tcggaatatgttcgtgtgaactgtcaaacagcccatttcggttacgcgattccaattaac
atcgtgcccgttcgagagaatcccgagctagtcgaattggtattggatcagtccgtcgag
ttgagcggtcgactagtgaatttcctgctcgatcatcatccgcaattgcgtcaacaagag
cagcgttcctatgatatggctgccacggccaagcatgatctacgccgaaagtttcccgcg
gacacgtccgcttccggcgaggaggacatcgccgcgatcgccaagcagatcagcgatcac
gcagaggcgatttatcagacgtggaagagtcgcggattggcaccaacggagattctaact
tgccacagcaatacgactgccgctgacaaatttggcagcgcgttgacaccctgcaattca
cctgctgtgacgggaaacaatatcggcggcaagacgtcgccgtcgctcgagcattcttcc
ccgacaacggtagatatattgacccagacgccgaatctagacaatggcaatctcgagaaa
ctagtcaacaattttgtagtagaggacaaagctagaatagccgcttctaagcagagatca
ccatccaagttaccgtcttccatacaatttgccctgcagaaattcgagagaaactccacg
caacagcaacagacagctgccgcgaagaataatataattgccgataactcgaagaaattg
acgagtgtcttactgactcctacctcatcgtttttgaacaaaccgtcacaaatagtgaaa
cctcaggtccctgcgaaaacgcccggctctcatcatcgcgaggtcttcctggagactatc
gaaaccactttcccagtcgatttgacatcttccaataaaccggctcagcaaaagaggccc
accagtacgttaatcgcatcatcgcccgctgattcgttaaacgttaactcgtcggccggt
tcaggtttgacaacttggccattgaagaacaaattaaacgatgccaaaagaatcgcggat
gtatctcgcgcgtcagctaaatcacctcagcaagaggatgtcgcgaaaacattgccggcg
caggatgataagagatcggttataacaggaatgaactcgcggtgcgcgtacctcgacgag
gtcgcgcgggaggaagaaagactgataaacgctttgaaaacaggtgctgtaatcactgaa
gaacccgagaggacaatggcaagtttgcgcgctagacagaaaccggccgttaagcaagag
aaaccaaaggttgaaccggtcaaacagattatcatcggaggacacaattatcatgggaac
agctcgatggtatctaactcgggggcttctagttctaccgcaaatatatccaatattggc
aatgcagttactgccgccactgtgtctaccgatcggcctgacggtggtgcatcagccaac
gacacgaaatcactcagcaaggacgatctgtccgctatgtcgacgattgactatgccaag
gtcagataccaggctgctcaacaaaatccgcctacccagcagcgactcgaggagcaacga
gcctccaacaatccctacaataattccaccacggagcaattggtctccaacgcgagaacg
aagtttgaaatggagatacgaaaggataaggatactaagagcacggacaaagacccagtg
acatccagatgggggccgagaatcacttccccacgaccgcgtttagagcaggctgtgccc
catccggaattgactagtcaacagaagcaacatataaggacggccgcggcgacgggtacg
ggtaacaatcccgtccggccgttcctcaccagaggctccgtagccgagcgtgtactcatc
ttcgagaaatgcccgagcgagctgcttttagataaacgtggcccacgacaaccggccatc
aatacgtggagaggtggccacgaagtgcaaaataaggctcagacttactcgaaagaaaag
actcagcaaaaaagtctaccaccacatacaactttacaaagacaggtgaaaggcaataga
aatgttcttataccgagattttacttcccaggaggaaagccacttcctctctcacaaata
gagacaattatttcaaagattactgcggcctttcaaagtttaccgaattgtcgcgcttct
cgtgcacaatttcataccatcacgaaggcttgcgacttaccattgtattggaaaatacca
cttttcctggcagcaggcggtgagcaaaaaggatttgtcgagatgaatgtctttctagaa
ttttggaaagaattaacagctacccatcacgatacagctagtaaatttatcaatattgtc
actcgaggacttcgaaatagtatactcccggaggacttgatcccactcgtacaagacgta
gtagaaacgcatccaggactgacatttttaaaggaagccacggaatttcattcccgctat
gtacacacggtaatcgctaggatattttattgcgtgaatcgaagttggagcggtaaaatt
tcaattgccgaattaaggcgaagtaatctattagcagtgatcatcgtgcttgagcacgaa
gaggatattaatcaagttacggcatacttcagctacgaacacttttatgtgatatattgc
aaattctgggagttggatcgcgatcatgatctcttcatagataaaatagatctaacgaga
cacaatgatcatgcgttatctactcgaatgatcgaaaggatatttagcggtgctgtgacg
agaggtggtaaagcaaaaaataataacaactcgcaacaaccagaggacaagatgagttac
acggagtttgtgtggttccttcttagcgaggaagacaaaaatcatccaactgccattgaa
tattggtttagatgtatggatctcgatggcgatggttacttgtcgatgtacgaactggaa
tacttctatgaagagcagttacgtcgaatggaagcgattggcctggaaacattgcctttc
gaagattgtctttgtcagatgttggatatgattcatccggtgataccaggcaagatatcg
ttgaacgacttgaagaaatgcaaaacgacatccatcttctttgacactttcttcaatctg
gaaaagtatctagatcacgaacagagggatccatttgcctcgacaagagatcatgatgct
gatggtcacgaactctcggattgggatcgatttgctgcagaggaatatgaattattggtt
gccgaagaaagtggcaatgaacaacaagaacaaatgttgcacaatgttgtatcatggaaa
ttatcgccaagtgacattctaatagacaactcggatatagccagcgattcgaattcatta
atgaattcattggacattcatatgcaacagtcgaaacatgatgatagcggcgataccgat
actgatgattacgctgacagcgataattaa
DBGET
integrated database retrieval system
