Temnothorax longispinosus: 139808659
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Entry
139808659 CDS
T10889
Symbol
Vps50
Name
(RefSeq) syndetin
KO
K23288
syndetin
Organism
tln Temnothorax longispinosus
Brite
KEGG Orthology (KO) [BR:
tln00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tln04131
]
139808659 (Vps50)
Membrane trafficking [BR:
tln04131
]
Protein recycling
Others
EARP complex
139808659 (Vps50)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syndetin_C
Vps54_N
Motif
Other DBs
NCBI-GeneID:
139808659
NCBI-ProteinID:
XP_071626977
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All DBs
Position
2:2118684..2125989
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AA seq
941 aa
AA seq
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MQSDIMEDLKIKFFDLINKQNATKVPLMGLNPDLLNPPELQKCEDLCSEADQSTESEPIP
DQDVLDSIEDVYFNTDGSFDSSRYELKKLPMILHSKEIEKCYKKLKQQHQVVSKKVLQLI
LQKQSACNAEFDRIYLLQEQLQDVLEICKMGRADLKLAEKQFTKASLGILANYQRRQVTQ
DLLNSLNTIKTLQCTGNRLKELLDEGNYPGAISLLLECQSAAQTYKHFHCIAELNANLQN
ILDQAERTLDNTLSKMCTEFDVAVYSSIQEAYTLLGKTQSAMDQLHLHFTAAIHNTAFAI
IYRYAGGDMKRQYKQLCQAVPREKCIACLTELCKSLWTILNSYHLIVNWHNAQEDKVECK
SDVKDLEATRSKHYVKHKLENGMVRVWHDVEMKISVYLTNTDLTNTKFEQFVQVLGIVNR
LMEIGEDLCGFKSENLQESIKKQSLSYFSHYHACRLDELKMFLENDGWELCPVKSDFMAT
QLLEFRSLKPSLNNCKAWNSLDSSTLSDSDNSTGVAGDLQKYLEGGLSPFTIGLDDTMDE
DILINDIDQPAYFSDESDEDIPDELKHEYVDEPDHTKVNKKKCKLKQSGPMVTNTTLSIL
RVCGKYLQMSKLLRSIAVTVIQSMIQFFELCFYTVHLFFTSDLQINSDSLYSPKLKLSLT
RIRETLIISENDTMEENGNANYDKVRQPQLSSIVNLSQPEKLHGLTERIVAVESLIFLGQ
QYEGLRSYLEHLIASSPQRGFLHQFYMQTIASAADLRKPVYMAVTSQAFDVVNILNLMNK
VNWEVTDVMSQHSNYIDALIQEVCILNERLNTIGTYIPLNANICNAVWENVAHLITHTLV
EGFSNAKKCSNGGRALMQLDFTQLKSKFEKVTSLRPMPHREYVELYIKAYYLPENSFEEW
IKEHKEYSVKHLIGLISATCQNNKKTRQRLIALVEEQRPSR
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atgcagtccgacatcatggaggatttgaagataaaatttttcgacctcattaacaagcag
aatgcaactaaagtgccgcttatgggtttgaatcccgatctacttaatccacctgaatta
caaaaatgtgaagacctctgctccgaggctgatcaatcgacggagagcgagcctataccc
gatcaagatgtgttggactctatcgaagacgtttacttcaataccgatggtagctttgat
tcgtcgcgctacgaactgaagaaactgccaatgatactgcactctaaggaaattgagaaa
tgttataagaaactcaagcaacaacatcaagttgtctccaagaaagtgttgcagcttatc
ttgcagaaacagagtgcctgtaacgcagaatttgacaggatttacctgctgcaggaacaa
ctgcaggacgtcttagaaatatgtaagatgggaagggcagatctgaaattagctgagaaa
caatttactaaagcgagcttaggcatattagctaattaccagagacgacaagtgacccaa
gatctgttaaatagtttaaatactataaagaccctgcaatgtacggggaatcgtttgaaa
gagcttctggatgaagggaattatcctggagctatatcgcttcttttggagtgtcagagc
gccgctcagacttacaagcatttccattgtatcgctgagctcaatgcaaacttacaaaat
attttggatcaagcggaaaggaccttagacaatacgctctctaaaatgtgcactgaattc
gacgtcgcggtgtattcttctattcaggaagcttatacgttgttagggaagactcaatct
gccatggatcaattgcacttgcatttcactgctgccattcataacacggcgttcgccatt
atttatcgctatgcaggaggtgacatgaaaagacaatataaacaattgtgtcaggctgtg
cctcgtgagaaatgtatagcttgcctcacggaactgtgcaaatcattgtggacaatactg
aattcgtatcatttaattgtaaattggcataacgcgcaagaggataaagtcgagtgtaaa
tctgatgttaaggatttagaggcgactagaagcaagcactatgtcaaacacaaattggag
aatggtatggtccgagtatggcacgatgtggagatgaagatatcagtatatttaacgaac
acagatctgacaaataccaagtttgaacagtttgttcaggtattgggtatagttaacagg
ttgatggaaattggggaagatctctgtggtttcaaatcggagaacttgcaagagtccata
aaaaagcagtccctatcttacttttctcattatcacgcctgtcgtttggatgaattgaaa
atgtttttggaaaacgacggctgggagttgtgtcctgtaaagtccgatttcatggctact
caattattggaatttcgaagtctgaaaccttcgctcaataactgtaaagcatggaatagc
ttagatagctcgaccttaagcgacagcgataattctacgggagtcgcaggagacctgcaa
aaatatctggagggcggtttgtcaccgttcacaataggattggatgatactatggatgaa
gatattttaataaatgatattgatcaacccgcatatttttcggacgagtccgatgaggat
attcccgatgaattgaagcatgaatatgtcgacgagccagatcatacgaaagttaataaa
aagaagtgcaaactcaaacagtctggacctatggtcacaaacacgacgttaagcatactg
agagtgtgcggcaagtatctacagatgtcgaagcttttacgatcaatcgcggttactgtc
atacagagcatgatacaatttttcgagctgtgcttctacacagtacacttattctttacg
tcggatctccaaatcaatagcgactcgttatacagtccgaaattaaaattatccttaacg
cgaatcagagaaactctgattatctctgagaatgatacaatggaagaaaatggcaatgcg
aattacgataaagtaagacaaccacagctttcatccattgtgaatttgtcacagcccgag
aaacttcacggattaacggaacgtattgtagctgtcgagtctctgatatttttaggacag
cagtacgaaggcctaaggtcttatttagagcatcttattgccagcagtcctcagagagga
tttttacatcagttttatatgcaaacgatagcgtctgccgcagacttaagaaagccagtc
tatatggcagtaacgtcgcaagcgtttgacgttgtaaatattttgaatttgatgaacaaa
gttaattgggaggtgacggacgtcatgtctcaacacagtaattatatcgatgcgctaatc
caggaagtgtgcattttgaacgagagacttaacactattggaacgtatatacctttgaat
gcgaatatatgtaatgcagtatgggaaaatgtggctcacttaatcacacacaccttagtg
gaagggttttccaatgctaaaaagtgttcaaatggcggtagagctttaatgcaactcgat
ttcacgcagctaaagtccaagtttgagaaagtgacgtcgttgagacctatgccgcatagg
gagtatgttgaattgtacatcaaagcgtactatcttcctgaaaatagcttcgaagaatgg
attaaggagcacaaggaatattcagttaaacatttaatcggtctgatttcggcgacgtgt
caaaacaataagaaaacgcggcaacgattgatagcgcttgtggaggagcagcggcccagc
agatag
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