Temnothorax longispinosus: 139808894
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Entry
139808894 CDS
T10889
Symbol
Rfc3
Name
(RefSeq) replication factor C subunit 5
KO
K10756
replication factor C subunit 3/5
Organism
tln Temnothorax longispinosus
Pathway
tln03030
DNA replication
tln03410
Base excision repair
tln03420
Nucleotide excision repair
tln03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tln00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
139808894 (Rfc3)
03410 Base excision repair
139808894 (Rfc3)
03420 Nucleotide excision repair
139808894 (Rfc3)
03430 Mismatch repair
139808894 (Rfc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tln03032
]
139808894 (Rfc3)
03036 Chromosome and associated proteins [BR:
tln03036
]
139808894 (Rfc3)
03400 DNA repair and recombination proteins [BR:
tln03400
]
139808894 (Rfc3)
DNA replication proteins [BR:
tln03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
139808894 (Rfc3)
DNA Replication Termination Factors
ELG1-RFC complex
139808894 (Rfc3)
Chromosome and associated proteins [BR:
tln03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
139808894 (Rfc3)
DNA repair and recombination proteins [BR:
tln03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
139808894 (Rfc3)
Check point factors
HRAD17(Rad24)-RFC complex
139808894 (Rfc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
AAA_22
AAA_16
AAA_14
RuvB_N
AAA_5
AAA_11
DUF815
AAA_24
ResIII
DEAD
AAA_30
AAA_19
AAA_7
AAA_assoc_2
PhoH
ATPase_2
Mg_chelatase
TniB
RCF1-5-like_lid
FtsK_SpoIIIE
MCM
nSTAND3
TIP49
bpMoxR
AAA_3
AAA_25
Motif
Other DBs
NCBI-GeneID:
139808894
NCBI-ProteinID:
XP_071627506
LinkDB
All DBs
Position
2:8513997..8515779
Genome browser
AA seq
327 aa
AA seq
DB search
MTSSNEQQNLPWVEKYRPKSLDELISHETIIKTINKYIDENQLPHLLLYGPPGTGKTSTI
LACARKLYTPAQFNSMVLELNASDDRGIGIVRGQILSFASTGTMYRSAFKLIILDEADAM
TNDAQNALRRIIEKYTDNVRFCIICNYLNKIIPALQSRCTRFRFLPLAAEQIMPRLNHVI
EAENLKVTEDGKEALMTLSGGDMRKVISVLQSTWFAYGAVNKENVYNCVGHPLPADINNI
VNWLLNESYDTCYTKIQKLKLDKGLALQDILTEIHSCIVKIDFPDPLFIDVLCKMADIEK
RLASGCRDAIQVNSLISAFYKLRNIET
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgacgtccagcaacgaacaacagaatttaccatgggtcgagaagtatcgtcccaagagt
ctggacgagcttatttcccacgagactataataaagacgataaacaagtacattgatgag
aatcaactgccgcatctcctcctgtacgggccacctgggacgggaaagaccagcactatc
ctggcgtgtgctcgtaaactctatactccagctcaattcaattcaatggtgctggaattg
aatgcttccgatgacagaggcataggtatagtgcgcggccagatcctgagttttgccagc
acgggtactatgtacagatctgcgttcaaattaattatcctagacgaagccgacgcgatg
acgaatgacgctcagaatgcacttaggagaattatcgagaaatacacggataacgtacgt
ttctgcattatatgcaactatctcaacaagattatcccagctttgcagtctcgctgcacc
aggtttaggttcctgcctcttgcggcggagcagataatgccaagattgaatcacgttatt
gaagcggaaaacttaaaagttacggaggacgggaaggaagcattaatgacgttaagtggc
ggtgatatgaggaaagtgataagcgtacttcaaagtacatggtttgcttacggtgcggtg
aacaaagagaacgtatataattgtgttgggcatccgttaccagctgacataaataatatt
gtaaactggttgctaaatgaatcttacgacacatgctacacgaagattcaaaagttgaag
ttagacaaaggactggcgctgcaagatatattgacagagatccactcgtgtatagttaaa
attgattttcccgatccgttatttatcgatgtactgtgcaaaatggcagacatagaaaaa
agactggcttctggatgtcgcgacgccattcaagtaaattctcttatatctgcattctac
aagcttcgcaatatcgaaacgtga
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