Temnothorax longispinosus: 139808962
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Entry
139808962 CDS
T10889
Symbol
D4
Name
(RefSeq) zinc finger protein ubi-d4 A isoform X1
KO
K13196
zinc finger protein ubi-d4
Organism
tln Temnothorax longispinosus
Pathway
tln03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
tln00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
139808962 (D4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tln03041
]
139808962 (D4)
03036 Chromosome and associated proteins [BR:
tln03036
]
139808962 (D4)
Spliceosome [BR:
tln03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
139808962 (D4)
Chromosome and associated proteins [BR:
tln03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
139808962 (D4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPF1-3_N
PHD
PHDvar_NSD
PHD_4
PHD_2
Lar_restr_allev
SAGA-Tad1
TNP-like_RNaseH_C
zf_RING_Vps8
Motif
Other DBs
NCBI-GeneID:
139808962
NCBI-ProteinID:
XP_071627617
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All DBs
Position
2:2364234..2376541
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AA seq
527 aa
AA seq
DB search
MTTVAISPAMAHTNSGIIQVVNESNLSKIESFLNDTAYREAIENSSNYNSRLCRERRLRM
PFLDSQTGVAQNHSALFMSSRERLPGLLHGQVYTYPSKRWRKKRRQYLMHYLHPKRGPRG
DTEDGTEGVETITHVNDDSKDSVALKDEHSKDAWYYDEQDMLDMDAYEEPDPDSDYDYEE
SYSSKRKRRKTRGGGHHPARSHPPTTDTPGGKRTKGGGRGRKKTNYDSVDSDKPFVCDLC
SARYKTRPGLVYHYGHSHSTSSGDPAKELSPSPAEVEPRSVADTAASNQPERGKRSSSPV
GGTRRGRQNATSSNTSSPSPAAPTAAPTAGTAGSQPQQSQQQQLQSAVQAPVAPASPTVP
ATKEDHLPSASSPGGTAVSTLPSAETAGATGGPPTPGGPTAEKKPGGKSSAAQPSPYCDF
CLGDARENKKTGGSEELVSCSDCGRSGHPTCLQFTANMIVSVRKYRWQCIECKCCSICGT
SDNDDQLLFCDDCDRGYHMYCLSPALASPPEGSWSCRLCIAEFHHRD
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atgacgacggtggcgatctccccagccatggctcacaccaacagcggaataatacaagtc
gtgaacgagagtaatctgagcaagatcgagagcttcctcaacgacacggcttacagagag
gccattgagaattcatccaattacaatagccgactatgccgggaacgacgtcttcgcatg
cccttcctcgactcgcagacaggtgttgcgcaaaatcattctgcactttttatgtcctcg
agagaaagattacctggcttattgcacggccaggtttatacttatccaagcaaacgatgg
cgaaagaaacgccggcaatatttaatgcattatctacatccaaaacgaggaccaagagga
gatacggaagatggaacggaaggcgtggaaactattacgcatgtaaatgacgatagcaaa
gattcggtagcacttaaagacgaacacagtaaagacgcttggtattatgatgagcaagac
atgttagatatggatgcctatgaagaacctgatcctgatagcgactatgattacgaggag
agttatagcagtaaacgaaaacgcagaaaaactcgtggaggtggtcatcatcctgctcgt
agtcatccacctaccacagatactccgggcggtaaacgtacaaaaggtggtggccgtgga
cgtaaaaagaccaactacgactctgttgactctgataaaccgttcgtttgtgacctatgc
agcgcacggtataagaccagacccggtctggtctaccattacggtcattcccactctact
tcctccggtgatcctgctaaggaactaagtcccagtcctgccgaagttgaacctaggagc
gttgcagacaccgctgcttcgaaccagccagagagaggaaaaagatcgtcaagtcctgta
ggtggtacacgtcggggtcgtcagaacgctacctcctcgaatacctcgagtccctccccg
gcggcgcctaccgccgcacccactgcgggaacggcgggatcgcagccgcagcaatcgcag
cagcagcagctgcaatcggccgtgcaggcgcccgtcgccccggcgtcacccaccgtcccg
gcgaccaaggaagatcatctgccctcggcgtcctcgcccggcggcaccgccgtctccacg
ctgccgtccgcggagaccgcgggcgcgaccggcggcccgcccacccccgggggaccgacc
gcggagaagaagcctggtggcaagtcgtccgcggcccagccgtccccgtactgcgacttt
tgcctgggtgacgcgcgcgagaacaagaagaccggcggttccgaggagctggtgtcgtgc
agcgattgcggccgctcagggcatccaacttgtttgcaattcactgcaaacatgatcgtt
tctgttcgcaagtacaggtggcagtgtatcgaatgcaaatgttgctctatttgcggcacc
tcggacaacgatgatcagttgctgttctgtgacgactgtgatcgtggctaccacatgtat
tgtctgtctccggctcttgcatcacctcccgagggctcctggtcttgccgcctatgcata
gccgaatttcatcaccgtgattaa
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