Temnothorax longispinosus: 139809153
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Entry
139809153 CDS
T10889
Symbol
Spt5
Name
(RefSeq) transcription elongation factor SPT5
KO
K15172
transcription elongation factor SPT5
Organism
tln Temnothorax longispinosus
Pathway
tln03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
tln00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
139809153 (Spt5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tln03021
]
139809153 (Spt5)
03019 Messenger RNA biogenesis [BR:
tln03019
]
139809153 (Spt5)
Transcription machinery [BR:
tln03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
139809153 (Spt5)
RNA polymerase I system
139809153 (Spt5)
Messenger RNA biogenesis [BR:
tln03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
139809153 (Spt5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KOW1_SPT5
KOW4_SPT5
KOW2_Spt5
KOW
KOW6_SPT5
KOW7_SPT5
Spt5-NGN
KOW5_SPT5
KOWx_SPT5
Spt5_N
CTD
GPKOW_C
SH3_KIN17_C
CoV_nucleocap
Motif
Other DBs
NCBI-GeneID:
139809153
NCBI-ProteinID:
XP_071627958
LinkDB
All DBs
Position
2:15939386..15945756
Genome browser
AA seq
1116 aa
AA seq
DB search
MSDSEGASDAGSVGGRSRSVSRSRSPSRSSGSRSPSRSRSRSRSPSGSEDGDPKLDEAEE
VRSGDEEAVEPEEEPEGEDLDNSSEYDEEEEEEDDDRPRKKKKKDRFGGFIIDEAEVDDE
VEDDDEWEEGAQEIGIVGNEVDELGPTAREIEGRRRGTNLWDSQKEDEIEEYLRKKYADE
SIAARRFGDGGEEMSDEITQQTLLPGVKDPNLWMVKCRIGEEKSTVLLLMRKFITYQFSS
EPLQIKSVVAPEGVKGYIYIEAYKQPHVKAAIENVGNLRMGIWKQQMVPIKEMTDVLRVV
KEQTGLKAKQWVRLKRGIYKDDIAQVDYVDLAQNQVHLKLLPRIDYTRPRGALRTAQSES
EALKRKKKRRPPAKPFDPEAIRAIGGEVTSDGDFLIFEGNRYSRKGFLYKNFTTSAIIAE
GVKPTLSELERFEEAPEGVEIDLSGTPGTGTSGKEDQSVTHSFSNGDNVEVCEGELINLQ
GKIVSIDGNMIMVMPKHEELKEALEFQASELRKYFTQGDHVKVVAGRYEGDTGLIVRVEQ
NRVVLFSDLSMHELEVLPRDLQLCSDMATGVDSLGQFQWGDLVQLDAQTVGVIVRLEREN
FHVLSMHGKVVEARPQGLTKRRENRNAVALDSQQNTIQKKDIVKVVDGPHAGRGGEIKHL
YRSFAFLHSRMFVDNGGIFVCKTRHLQLSGGNKTTSINSMSPVAGFMSPRIASPMHPSGG
GFGRGGGGGRGRGRGGGGGARRDRELIGTTIKITGGPYKGNVGIVKDATETTARVELHST
CQTISVDRSHIANVGVPTKDGGFSSYNRTPAYGAGGQTPMYARDGSKTPMHGSQTPMYEN
GSRTPHYGSMTPSHDGSRTPGQSGAWDPSVTNTPARTNDFDGYSIEEGGSPGYGPGYPPT
GGPFTPQTPGTMYGSEQSFSSYQPSPSPAGSATASPSPTGYVATPSPSGTGYTTSPHGAF
ATPSPMGYSPMTPGVPSSPYNPHTPSSTGMDAVGSGIMGSSEWHTTDIEVRIRDSHDDPA
LAGQQAVIRGISGGMCTVYLPTEDRVVNLVCEQLEPVVPSRGDRVKVILGEDREAVGTLL
SIDNQEGVVKLNTDEIKFLQLRFLCKMKALDLKDLK
NT seq
3351 nt
NT seq
+upstream
nt +downstream
nt
atgtcggattcggaaggtgccagcgacgcggggagcgtcggaggaagatctcgaagcgtc
tctcgcagcagaagtccttcacgtagctcaggatccaggagtccgtccagatctcgatca
cgttcccgatcaccgtctggctcagaagatggagacccgaagctggacgaggcagaagaa
gtcagatcgggagatgaagaagctgtggaaccggaagaggaacctgaaggagaagatttg
gacaatagtagtgaatatgatgaagaagaagaggaagaggatgatgatcggccgagaaag
aaaaagaagaaggataggtttggtgggttcatcatagatgaagctgaagtagatgatgaa
gttgaggatgacgatgaatgggaggaaggtgcccaagaaattggcatcgtgggaaacgag
gtggacgagttgggaccgactgcgcgtgaaattgaaggacgtcgtagaggtacaaatctt
tgggattcgcagaaagaagacgagattgaggaataccttcgtaaaaagtatgcagacgag
tcgattgccgctcgtcgctttggcgacggcggtgaagaaatgagtgacgaaatcactcaa
cagactttgttgcccggcgtaaaagatcccaatttgtggatggtaaaatgccggatagga
gaagaaaagtcgaccgtgctgttattgatgcggaaatttatcacgtatcaattttccagc
gaacctcttcagataaaatccgttgtggcaccggaaggtgttaaaggttacatttacata
gaagcttacaagcagccgcatgtaaaagctgctatcgaaaatgttggtaacctcaggatg
ggtatatggaagcagcaaatggtaccgattaaagagatgaccgacgtgctgcgagtagtt
aaagagcagaccggtttaaaagctaaacaatgggtccgtttaaaacgaggcatttacaaa
gatgatatagctcaagttgattatgtcgacttagcacaaaatcaagttcatttaaaattg
cttccgagaatcgattacaccagaccacgcggggcattgagaacagcgcagagcgaatct
gaagcattgaaacgtaagaagaaaagacgaccacctgcgaaaccattcgatcccgaagca
atccgtgctattggcggtgaagttaccagtgatggagatttccttatttttgaaggaaat
agatatagtcgtaaaggttttctttataaaaatttcactacaagtgctattatcgcggag
ggtgtaaaacctacactctccgaattagagagatttgaagaagcaccggaaggtgttgag
atagatttaagtggtactccaggaactggaacttctggaaaagaagatcagtccgttact
cattccttcagtaacggagataatgtagaggtttgcgagggtgaactaataaacctacag
ggaaagattgtttccatagatggaaacatgattatggttatgccaaagcatgaagaactt
aaagaagctttggaattccaagcttcggagttgcgaaaatactttacgcaaggcgatcac
gttaaggttgtagcaggaagatacgaaggtgatacaggtttaattgttagggtagaacaa
aatagagtagttttattttctgatttgtcaatgcacgaactcgaggttcttccgagggat
ctacaattatgctctgacatggctaccggcgttgatagcttaggacaattccaatggggt
gacttggtgcagcttgatgcgcaaacagtcggtgttatcgtccgattagaacgtgagaat
ttccacgttctctctatgcatggcaaagtggtcgaagcgaggccgcaaggtcttacgaag
cgtcgagaaaatagaaacgcggtcgctttagactcgcaacagaataccatacagaaaaaa
gacattgttaaagtggtcgacggaccgcatgcaggtcgaggtggtgaaattaaacatctg
tacagaagttttgcctttttacactcgagaatgtttgtcgacaatggtggaatattcgta
tgcaaaaccagacatttacagttgtccggtggaaataagacaacttccattaattctatg
tcaccagtggctggatttatgtctcctagaattgcctctccgatgcatcctagcggaggt
ggttttggacggggcggcggaggcggaagaggcagaggccgtggtggcggtggcggtgca
agacgggatagagaattaattggaaccacgattaaaataacaggtggaccgtacaaggga
aacgtgggtattgtgaaagatgcgacagagacaacagcgcgcgtggaattgcactccacg
tgtcaaacaatctccgtcgatcgatctcatatagcaaacgtcggcgtcccgacaaaggat
ggtggcttcagcagttacaacagaactccggcttacggtgctggtgggcagacgccgatg
tacgcgagggacggatcaaagacacctatgcacggttcccagacgccgatgtacgaaaat
ggttctcgcacccctcactacggttcaatgacgccgtctcacgatggatcgcgaacacca
ggacaatctggagcttgggatccgtcagttactaacacacccgccaggacgaacgatttc
gacggctacagtatagaagaaggtggctcgcccggttacgggcccggatatcctcctact
ggtgggccgtttactccgcagactccgggcaccatgtacggctcggaacaaagcttcagc
tcatatcagccgagtcctagtcctgcgggcagtgctaccgcgagcccaagtcctacaggc
tacgttgctactccgtccccaagtggtactggatacactactagcccacatggagcattt
gcaactccttctccgatgggttatagtcctatgacacctggagtaccaagtagtccatac
aatccacatacacctagttcaacaggaatggatgcagtcggttccggtatcatgggtagc
tcagaatggcatacgacggatattgaagtacgcattcgcgactctcatgacgatcctgct
ctcgctggacaacaagcagttattcgaggaatttcaggtggtatgtgcactgtttatcta
cctaccgaagatcgagttgtgaacctagtgtgtgaacaactggaacctgtggtaccgtca
cgcggcgatcgagtcaaagtaattctgggtgaagaccgcgaagctgtcggcactttactt
tcgatcgataatcaagagggagtggtaaaactcaacacggacgagataaaattcttgcaa
ttgcgatttttgtgtaaaatgaaagcactagatttaaaagatttgaaatga
DBGET
integrated database retrieval system
