Temnothorax longispinosus: 139809208
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Entry
139809208 CDS
T10889
Symbol
Shg
Name
(RefSeq) DE-cadherin isoform X1
KO
K27891
DE-cadherin
Organism
tln Temnothorax longispinosus
Brite
KEGG Orthology (KO) [BR:
tln00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tln04515
]
139809208 (Shg)
Cell adhesion molecules [BR:
tln04515
]
Cadherins
Cadherin related
139809208 (Shg)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Ig_Shg
CADH_Y-type_LIR
Laminin_G_2
Laminin_G_1
Cadherin_FAT4_N
Cadherin_CELSR2_9th
Fibulin_C
RET_CLD1
Rep_fac-A_3
DUF443
Motif
Other DBs
NCBI-GeneID:
139809208
NCBI-ProteinID:
XP_071628047
LinkDB
All DBs
Position
2:complement(18897356..19020724)
Genome browser
AA seq
1509 aa
AA seq
DB search
MLGKCVALRSGARPRTLVALSTSPPALLASVLLLLLCGTYASATRLRHSRHLDVRSQFLG
EGVLSLDENHNHKPVFSNCSNYAPVVKEEEPPGTVVIQVHAEDRDPPEDGGTITYSFVTG
PEEKLKFKINNKTGLITTTQMLDRDEPAREKEAYLTVLAVDNGRPKLDDVCTFKVTIEDV
NDNGPVFDKVVFRGYAWKAYTESVPQDLPVGRQVMRVSATDIDNGNNSVVRYSLSPKRPD
DAVYFRIDRESGVIFLNKAIDRNPDYTFSMTARAEDLGEFPQSNVIDLDIRVVESHKKAP
AFLPRSPEPIRLKENFNDFDSSIVRLKAVSNIENSSNSDNSRLIFELVTGRTEQTNKGNT
FRLESNKDVADIKLAQHLDYESNTQYSLIVRVQNKYELAAETVVDIEVLDVNDNIPVFRD
VKTGSVLENEPRGVPVMQVRAIDLDGTSANNQVSYELEDFKDLFAIDPQTGNITTLVTFD
KEVEDSYSVKIIAWDNAPSALRKTGEHNKGEQVFHIKIADKNDNPPRFTRKVYTHNSIDE
NADINTAVTEVKANDPDTASSVTYSIISGNTDDSFYIEAISGVIRVNKPLDYEKITKYNL
TVRASDGVFNDTAQVEIFIENVNDNSPVFEDFNKNPTIEEEKLVDGCITTVVAYDPDIED
RNADQHIAYFIVNEEQQPLIGIDKTGCMKLKNPLDRDPPNGHSTWIVPVLARDEDGSGLK
ETVYVNITLIDINDNAPFLDMPYPVIWGENKPPSMITELRARDYDSEENGPPFEFKIDIT
ADQEITKKFDIRETSLYARVMFDREERKSYDIPIAITDSGVPPMTGTSTLTVIIGDENDN
PMREGSSSIFVYNYKGESPDTEIGRVYVNDPDDWDLPDKSFDWASPHDGFHLNTTTGMIT
LLSGTSNDTFVLKFIVTEKGQIIPSHQVHAYVNVTVKELPEEAVDKSGSVRFHGLTAEEF
VEPDESGVSKKEVFQEKLATMLNTSVENVDVFTVLHSPHHNNRSLLDVRFSAHGSPYYAP
EKLNTIIAQHSKEIERGMKADILLMNIDECLFEKLHCNNSCRNFLNASTVPYVVYTNTSS
FVGVRAVVDPQCTCHVAEPIVCLNGGTPLAERCECPPGLEGPRCELLGIGFHGDGWAIMP
PPGQACDDSHLGLEITPHVDNGLVFYFGPMTYNPKLGIQDFMSLELQHGFAVLYVDYGTG
TVRLDQRQIKLTDGKSHRIDVYWKKTSIEMIVDKCGISACMSLTAPQGTSEFLNVNSPMQ
VGGTLTNLAHLASSLKWDHKPTDKGFVGCIRNMTFNGNTYNLGMPSVSRNADPGCDHGMA
KAISFGIDTNFIVAILVCVLILLILLVAVVVHRRKTDDLYKDMDDIRENIINYEDEGGGE
TDAGYDLNVLRAIYDAPPIDSKIAPIGLQGRGTDEVPDICGFLDGKKESCDKDPDTNPFD
DVRHYAYEGEGNSEGDLSSLASCTDDGDLNFNYLSNFGPRFRKLADMYGEDPSDEESDGV
GERESESWC
NT seq
4530 nt
NT seq
+upstream
nt +downstream
nt
atgctgggaaaatgcgtcgcgctgcggtccggggcgaggccccgtactctcgtcgcgcta
tccacgtcgccacccgccctccttgccagcgtgctgttgctactgctgtgcggaacttac
gcgtctgcaacgagattgaggcactcaagacacctggacgtgagatcgcagtttctgggc
gagggtgtattatcgctcgatgaaaatcacaaccacaagccggtgttctccaattgctcg
aattacgcgccggtggtgaaggaggaggaaccgcctggcacggtggtgatccaggtgcat
gccgaggatagggatccgccggaggatggaggtaccattacatacagcttcgtgactggt
cctgaggaaaaattaaaattcaaaatcaacaacaagacgggcctcatcacgacgacccag
atgctcgacagggacgaacccgccagagagaaggaggcctatctcacggtactcgcagtc
gacaatggaaggccgaagctggatgacgtgtgcacatttaaggtcaccatcgaagacgtc
aatgacaacggacccgtcttcgacaaagtggtcttccgtggatacgcgtggaaggcatac
acggaatctgtgccgcaagatttaccggtgggtcgccaggtcatgcgagtttctgccacc
gacatcgacaatggcaacaattccgtcgtacggtatagtctgtctcctaagagaccggat
gatgctgtatactttcggatcgaccgcgagtccggtgtcatattcctcaacaaggctata
gaccggaatccagattacacatttagtatgacggcgagggccgaggatcttggcgaattc
ccgcagagcaatgtcattgatcttgacatacgggttgtggaatcgcataagaaggcgcca
gcttttctaccgaggtcaccggagccgatcagacttaaggagaattttaacgatttcgat
tcgagcattgtccgtttgaaagcggtttccaacatcgaaaattctagtaattcggacaat
tcgcgtctaatatttgagctcgtgaccggccgaacagaacagaccaacaaggggaacact
tttagattggaatccaataaagatgtagcagatatcaagctagctcagcatcttgattac
gagagtaacacgcaatactcattaatagtgagagtacaaaacaagtatgagttagctgct
gaaacggtggtcgatatcgaagttctagacgtaaatgacaacattccagttttccgtgat
gtcaaaacaggaagcgtgttagagaacgaaccccgaggagttcctgtgatgcaagtgcga
gccattgaccttgatggaacgtccgctaataatcaggttagctacgagttggaggatttc
aaggacctctttgccatcgacccgcaaactggtaatatcaccacgttagtgacattcgac
aaagaagtcgaagatagctacagtgtaaaaataatagcatgggataatgctccgagtgct
ttgcgcaaaaccggcgagcacaataaaggagaacaggtgttccatatcaaaatcgctgac
aagaacgacaatccgcctcgctttacccggaaagtgtacactcataattcgattgacgaa
aacgccgacattaacacggccgtgactgaagtcaaagccaacgatcccgatacggcaagc
tctgtcacgtacagcatcatatcgggaaacaccgacgacagtttttatattgaagctata
tcgggagtgattcgcgtgaacaagccgctcgattatgaaaaaatcaccaagtacaatttg
actgtgagagcgtccgacggtgtgtttaatgacacggcgcaagtcgagatttttatcgaa
aacgttaatgacaattcgccggtcttcgaagacttcaacaaaaatccgacgatagaggaa
gaaaaattggtggacggatgtatcaccactgtggtggcttatgaccctgatatcgaagat
agaaatgccgatcagcacattgcctacttcatcgtcaacgaagaacaacagcccttaata
ggaatcgacaaaactggctgtatgaaattgaaaaatccattagatcgtgacccaccgaat
ggtcactcaacgtggattgttcccgtattggcaagagacgaggatggttcgggtcttaag
gaaacggtgtatgttaatattactctcatagatatcaatgacaacgcaccatttctcgat
atgccttacccagtaatttggggtgaaaataaaccacccagcatgataaccgagcttaga
gcacgagattatgactccgaggagaatggcccgccattcgagttcaaaattgacatcact
gcggaccaggaaatcacaaaaaaatttgatatacgcgagactagtttatatgcgcgagtg
atgtttgatcgagaggagcggaaaagttacgatataccgatcgcaatcacggacagtggt
gtgccacctatgacgggtacttcgacgcttactgtgatcataggcgacgagaatgataat
cctatgcgggagggctcgagttctatatttgtttacaattataaaggagaatctcctgac
acggaaatcggacgcgtttatgttaatgatccggatgattgggatctgccggacaaatct
ttcgattgggcttctcctcacgacggtttccatcttaataccactaccggtatgatcact
ttactgtcgggtacatcaaacgacaccttcgtgttgaaatttatcgtcaccgagaaaggc
caaattattccatcgcatcaagtacatgcctacgtaaacgtcactgtcaaggaacttccc
gaagaagctgttgacaaatccggttctgtacgatttcatggactgacggcggaggaattt
gtggaacctgacgaatcgggtgtcagtaaaaaggaggtattccaagagaaattggcaacc
atgctgaatacatcggtcgagaatgtcgacgtgttcaccgtacttcattcgcctcatcac
aacaatagaagcttgttggacgtccgattttcggcgcatggcagtccgtattacgctccc
gagaagttgaacacgattatagcgcagcattcgaaagaaatcgaacgggggatgaaagcg
gatatcttattgatgaacattgacgagtgcctattcgagaagctccactgcaacaattcg
tgccgcaatttcttgaacgccagcaccgttccatatgtcgtctacaccaataccagctca
tttgtcggtgttagggcggtcgtagatccgcagtgcacttgccacgtagcggaacctatc
gtctgcttgaacggtggtacgcctctggcagaacgatgcgagtgtccgcctggtttagaa
gggccaagatgcgaactgctgggcattggatttcacggagacggttgggctataatgccg
ccgcctggtcaagcttgcgacgactcacatttaggattggagataacgccacacgtggac
aatggtcttgtattctatttcggtcccatgacttacaatccgaagcttggaattcaggat
ttcatgtctttggaacttcagcatggctttgctgtattgtatgttgactatggtacggga
actgtaaggctagatcagagacaaatcaaattaacggacggcaagagccacagaatagac
gtttactggaagaaaacttcgatagagatgatagtcgataagtgcggcatatccgcttgc
atgagtctcactgcaccgcaaggcaccagtgaatttttaaatgttaacagtccgatgcaa
gtaggtggtacattgactaatttagcgcacttagcatcaagtttgaaatgggatcataaa
ccaactgacaaaggatttgttggctgtatacgtaatatgacattcaatggaaatacgtac
aatttaggtatgccatcggtgtccagaaatgcggatcctggctgcgatcatggcatggca
aaggccatctcgttcggaattgacacgaattttatagtagctattttagtttgcgtcttg
atattgttaatattgctcgtggcggtagttgtgcataggagaaagacggatgatctgtat
aaagatatggacgatatcagagaaaatattattaattacgaggacgagggaggcggtgag
actgatgcgggttatgatttaaacgtcttgagagccatttacgacgcaccacctattgat
tctaagatagctccaattggcctacagggtagaggaaccgacgaagttccagacatttgt
ggcttcctagatggaaagaaagaaagctgcgataaagatcccgatacaaatccattcgac
gatgtaaggcattatgcttacgagggagaagggaattccgaaggcgacctatcgtcatta
gcttcatgcactgatgatggagatctcaattttaattatctatctaattttggaccaaga
tttagaaaattggcagatatgtatggagaagatccaagtgacgaggaaagtgacggagtc
ggtgaacgagagagcgaaagctggtgttga
DBGET
integrated database retrieval system
