Temnothorax longispinosus: 139809215
Help
Entry
139809215 CDS
T10889
Symbol
Spel1
Name
(RefSeq) DNA mismatch repair protein Msh2 isoform X1
KO
K08735
DNA mismatch repair protein MSH2
Organism
tln Temnothorax longispinosus
Pathway
tln03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tln00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
139809215 (Spel1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tln03400
]
139809215 (Spel1)
DNA repair and recombination proteins [BR:
tln03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
139809215 (Spel1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
MutS_I
AAA_27
Motif
Other DBs
NCBI-GeneID:
139809215
NCBI-ProteinID:
XP_071628063
LinkDB
All DBs
Position
2:997582..1011774
Genome browser
AA seq
938 aa
AA seq
DB search
MILAEHSFSLLHILVIFPSYPSQCPDSVLSHIILSNVRLGSTVDKLDTTIRFFNRSDYYT
VHGSDALFAAQEVFKTTSVCKMIGAEPHKTEGVILNKSHFETFVRDLLLVKQYRVEVYVN
QGSSKNQNWILEYKGSPGNLSHFEDILFGNNEIAVGVSVIAVKLGTEKKSKVVGLSCVDV
VSTLISVAEFQDNESFSNLESLLVTLAPKECLLIQGEGSYEFQTLKQLMERSNVMVTLRK
KNEFASDSIIDDLNTLIKFKKGQKQNAQSLPEVNLNLAMSATSALIKYLDLTSDEGHMNQ
FKLNQIEQSRYIRLDSAAIKALNIEPHTDTIPNLHGNPVASVLTLLDKCRTAQGHRLISQ
WVRQPLKDLSLIKERHDIVELLVTNNELRSVLSDDYLKRIPDLQQLAKKLARKKSTLQDC
YKIYLCVSYLPKLMEQLSSEGTITALKTMIIEPLKELIEDMDKFQQLVEQTIDLEAAERG
DFMVNSGFEDDLKTLKDAMDETEETIQQQLNKAANDLCLEAGKILKLESNQQFGYYFRIT
LKEEKILRNKKHYTILDSNKTGVRFRNNKLNELNDDFIDARNKYLERQKGVITEIVGIAA
GYSETVRTIGGVLACLDVLTAFASAAVSANKVYVRPKMVPSEEGELNLLQVRHPCLEMQQ
GVDYIANDINFKRDQCHFCIITGPNMGGKSTYIRSVGVTALMAHIGSFVPCDKATISLLD
CILARVGADDSQLKGLSTFMMEMIETAAILKTATCNSLVIIDELGRGTSTYEGCGIAWSI
AEHLARDIKSYCLFATHFHEITKLAEEIPTVKNQHVTALVEDNKLTLLYKIKPGICDQSF
GLHVAKMANFPPDVIEFAKRKQAELEDYQGVAFEGSDNPQKKQKIIQEGEILISQFLTKC
KALDQSLSNTDLESQLSLLKEDILSHKNPYIEALLTAS
NT seq
2817 nt
NT seq
+upstream
nt +downstream
nt
atgattctcgcggagcattctttttcgctcttacacatattagtgatctttccttcttat
ccatcacagtgtccagactcggtcttatcgcacataattctcagcaatgtaagattgggt
tctaccgttgacaaactcgataccacgatacggtttttcaatagatcagactattatacg
gtacatggaagcgacgctctctttgctgcacaagaagtatttaaaacaacatccgtgtgt
aaaatgattggagctgagccccataaaacggaaggagttattctcaataaaagtcatttc
gagacgtttgtgcgcgacttgttgttagtgaagcaatatagagttgaagtttatgtcaat
caaggctcctctaaaaatcagaactggatcttggagtacaaaggttcacccggcaatcta
tctcatttcgaagatatcttgttcggcaataatgaaatagctgtgggtgtatccgtaata
gctgtgaaactgggaacagaaaaaaaatccaaagtcgtcggcttaagttgtgtggatgtc
gtttcaactttaatttcagttgctgaatttcaagataacgagtcattttcaaatctagag
tcgctccttgtaacacttgctccaaaagaatgtttgttaattcagggagaaggcagttat
gaatttcaaactctcaaacaactgatggaaagaagtaacgtcatggtgactttaagaaag
aaaaatgaatttgccagtgactcaattattgatgacctgaacacgttaataaaatttaag
aaaggacaaaaacagaatgcgcaatcgttgcctgaagttaacttaaacttagctatgtct
gcaacatctgctcttattaaatatttagatttaacatcagacgaaggccatatgaatcaa
tttaaactgaatcaaatcgagcagtcgcggtacataagattggattctgcggcaataaaa
gctctcaacatcgaaccacatactgatacaattcccaatttacatggaaatccagtcgcc
agcgttttaacattattagataaatgcagaaccgcgcaagggcaccgattaatctcgcaa
tgggttcgacagcctcttaaagacctatctctaataaaggaacggcatgatatcgttgag
ctattagtaacaaataacgaactaagatctgttcttagtgatgactatttaaaacgtata
ccggatctacaacagctcgcgaagaagctggctaggaagaagtcgacgttacaagattgt
tacaaaatctacctgtgcgtatcatacttaccaaaactaatggaacagctttcatcagaa
ggaactatcacagccttgaaaacaatgataatagagccactgaaggaacttatagaggat
atggataaatttcaacaactggtagagcagacaattgatttagaggctgcagaaaggggt
gattttatggtcaattcaggatttgaagatgatctgaaaacattaaaagacgcaatggat
gaaacggaagaaaccattcaacaacaactcaataaggcagcgaatgatctttgcttagaa
gcaggaaagatattaaagctagaatctaatcaacaattcggctattactttcgtatcaca
ttaaaggaagagaaaatacttaggaacaagaaacattacactattctggattctaataaa
actggcgtaagattccgaaacaataaattaaacgaattgaatgacgattttatagatgcc
aggaataaatatttggagaggcagaaaggcgttattacagaaattgtaggaattgcagct
ggctatagcgaaacagtgcgtaccatcggtggcgtgctggcatgcctagatgttctcact
gcatttgcttctgcagcagtaagtgctaacaaggtatacgtgcgccccaaaatggtcccg
agcgaagaaggtgaattgaatctccttcaagttagacatccgtgtttggaaatgcaacaa
ggagtcgactatattgcgaatgatatcaattttaaaagagatcagtgccacttttgcatt
attactggcccaaatatgggaggtaaaagtacttatatcagatctgttggtgtaactgca
ttaatggctcatattggtagttttgttccttgtgataaagcaactatatcattactggat
tgcatattggctagagtgggagctgacgattctcagctaaaaggattgtcgacgttcatg
atggaaatgatagaaactgctgctattttgaagacagcgacatgtaattctcttgtaatt
atcgacgaattgggtagaggtacatctacctacgagggttgtggtatagcgtggtcaata
gcagagcatttggcgagggatattaaatcgtattgcctatttgctacgcacttccacgag
attacaaagttagctgaagaaatacctactgtaaaaaatcaacatgttaccgctcttgta
gaagacaataaattgacgttactttataaaataaagccagggatttgtgatcaaagtttt
ggtcttcatgtcgctaagatggctaatttcccaccagatgtaatagagttcgccaaaaga
aagcaagcagagctcgaggactatcaaggcgtagcttttgaaggatctgataatccccag
aagaaacagaagattattcaggagggtgaaatccttatctcgcaatttctcacaaagtgt
aaagctttagaccagtctttatctaacaccgacctggaaagtcagctgtcgttgttaaaa
gaagatattctctcccacaagaatccttacattgaagcgctcctgaccgcttcgtaa
DBGET
integrated database retrieval system
