Temnothorax longispinosus: 139809407
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Entry
139809407 CDS
T10889
Name
(RefSeq) patched domain-containing protein 3-like isoform X1
KO
K12385
Niemann-Pick C1 protein
Organism
tln Temnothorax longispinosus
Pathway
tln03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
tln04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
tln00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
139809407
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
139809407
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tln02000
]
139809407
Transporters [BR:
tln02000
]
Solute carrier family (SLC)
SLC65: NPC-type cholesterol transporter
139809407
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sterol-sensing
Patched
DUF5481
MMPL
ACR_tran
Motif
Other DBs
NCBI-GeneID:
139809407
NCBI-ProteinID:
XP_071628370
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Position
3:22242385..22253044
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AA seq
952 aa
AA seq
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MIKEEMELHEVRAKRMVCRRFWYTLPERISKTVEHFFYRLGVNIAQKPYRWMLGCLVVVL
VCLLGLLRFRQEKSPIRLWVPPDSDFVSDTEWLMSHYSEALRIETFILTGDNVLEQQTLI
KLNEITKQMMTTRTPENISWTDVCMKVPAISNSLYRQKRQSSLLEDNFFDDDLTSNVNQT
FEPSIHVDSNTYCGVIESLPMSCLMFSILDIWDFDSVKIKKDSTEEIITKINTVKVSPRL
GHPMNFSELLGDVTLDERGRIIAAAAIKTDMMVQVNFLNVDMDKIGNNAGTADWATEDVL
KWESAYLENIMNLSNQLQSERYINNSLKLYYEAGRSYGDISGKSIFQDIDKLVIGSALMF
LYVLTILSNQNWVEWRFCLTATGLLCVGAAFIFAVGICSLIGIPYGPVHTSLPFLLLALG
IDDIFVLNASWKQIHTDESNLNKPLTERIGLALGHAGSAISFTSLTDVVAFIIGASTILP
SLQSFCIYAAVGVFVTFLLQITFFTACFTLDARRIERKRNGMLPCIVHENFTPKSLDISS
AISWKFINFLYSKIVLTTPGKIIIVLITFVTMSVSITGLLRLQQWFDPTWLLSKESYLNE
YMALRYQAFPDQGFNAFVLMGDDIDYSSEFPKIISMTERLQNASFIQSIEPWPIDFAKFV
STYYTTDLRTTKIADDEFHHYLSKFLFSRGGGKYQRNFFFNEKFRCGRDAPRIISTTIDF
NFRRFEGPDEWVPAMDNSKLLTNEAQIHGYVTVWCVMFAPWTAGKLIGQEVSRNIILALI
CVMGTTTFLIAEVQTCCWILLCVFLTLLNVCGYMYFWGLTIDVVSCVGLELAVGLSVDYA
AHVAHAFLNAESREDDDNARRTRTLIAVRHIGAAVAYGAGSTFLAVSLLAFSTSYVFVAF
FRIFSLVIMFGLWHGLILLPVILSTIGPQSLRVTQQPQPMSEKAIAAADDED
NT seq
2859 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaggaggaaatggagctgcacgaggttcgtgccaagaggatggtgtgccgtaga
ttttggtataccctaccagaacgcatatccaagacggtggaacattttttttatcgactt
ggagtgaacatcgcccaaaagccgtacaggtggatgctcggatgtctcgtggtagtgcta
gtctgcctcttgggcctgctccgtttccgacaggaaaagagtcccatcaggctttgggta
ccaccggattctgacttcgtgagtgataccgaatggctgatgtcgcactactcggaggct
ctgcgaattgaaacgtttattctaactggcgataatgtcttagaacagcaaacacttatt
aagttaaatgaaattactaaacaaatgatgactactcggacacccgagaacatttcttgg
acagatgtttgtatgaaagttcctgccatttctaattctctgtacagacagaagagacaa
agttctctattggaagacaattttttcgatgacgatctcacttctaatgttaatcaaaca
tttgagccgtccattcatgtcgatagtaatacgtattgcggtgtaatcgagagtttgcct
atgagttgccttatgtttagtatcttggatatatgggattttgatagcgtcaaaattaag
aaagattccacagaagaaattatcacaaagataaacacggtaaaagtgagtcccagattg
ggccaccccatgaacttcagtgagcttctgggagacgtaactctagatgagagaggtaga
atcattgctgcggcagccataaaaactgatatgatggttcaagttaattttctcaatgta
gacatggataaaattggaaataatgcggggactgctgattgggcaacagaggacgtattg
aaatgggaatcagcttacctagaaaatataatgaatctttcgaaccaactgcaaagcgag
agatatataaataattccttgaagctttattacgaagctggtagaagttacggagatatt
tctggaaaatccatatttcaagatatagataaattggttatagggagtgcattaatgttt
ttgtacgtcttaacgattttgtcaaatcagaattgggtagaatggcggttttgtctcact
gctaccggtcttttgtgcgtgggtgctgcgtttatatttgcggtgggaatatgctctcta
atcggaattccgtacggtccagtgcatacgtcattaccatttttgctcttggctttgggg
atagacgatatttttgtacttaatgcatcttggaaacagatacataccgatgaatcaaac
ttaaataagccattaacagaaagaattggacttgcattaggtcatgccggttctgctatc
agttttacttcacttaccgatgtcgtggcatttatcatcggtgcttctacaatattacct
tcacttcaatcgttttgtatttatgctgcagtgggcgtgtttgtgacatttttattacaa
attacattttttactgcctgctttaccttggatgctaggagaatagaacggaaaagaaat
gggatgttaccatgtatcgtgcatgaaaactttacgcccaagtcattagacatcagcagt
gcaatttcctggaaatttataaactttttgtattcaaagatagtattgactacgcctggg
aaaattattatagtattaattacttttgtaacaatgtctgtaagcattaccggtttgctt
cgattgcaacaatggtttgatccaacatggttgttatcgaaagaatcgtacttgaacgaa
tatatggctctccgatatcaagcatttcctgatcaaggatttaatgcctttgtccttatg
ggagatgatattgattactcctctgaatttcctaagataatatctatgacagaacgctta
cagaatgcgtcttttatacaaagcatagaaccttggccgattgatttcgcgaaattcgtg
tcaacgtattataccacagatttaaggactacgaagatcgcagacgacgaatttcaccac
tatctgtcgaaatttctttttagtcgaggtggtggtaaatatcagcgaaatttctttttc
aacgagaagtttagatgtggtagggatgccccacgaatcatatcaacaactattgacttc
aactttagacgatttgagggacctgacgaatgggttccagcgatggataacagtaaactc
ttaacgaacgaagcgcaaattcatggatacgtaacggtgtggtgtgtaatgtttgcacct
tggactgccggcaaactaatcggtcaagaagtatcgcgaaacatcatcttggcattaatc
tgcgttatgggtaccacaaccttcctcatcgctgaagtgcagacttgttgttggatctta
ctctgtgtatttctcacgctactaaacgtttgtggctatatgtatttctggggactaacg
atagacgtagtgtcctgtgttggtctcgagctggccgttggtttaagtgtggattacgcg
gcacatgtcgcacacgctttcctgaatgctgagtcgcgagaagacgacgataatgctcgc
aggacccgaacattaatcgcagtcaggcacatcggtgcagcggtcgcatatggcgcgggt
tcaacatttctcgccgtctcgcttctggctttttcgacgtcctacgtattcgtcgctttc
ttccggatattctctttagtaattatgttcgggctctggcacgggctgattctgttgcca
gtcatattgagcactattgggccgcagagtttacgtgtgacacaacaaccgcaaccgatg
tccgagaaggccattgctgcggccgatgatgaagattga
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