Temnothorax longispinosus: 139809534
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Entry
139809534 CDS
T10889
Symbol
Garnet
Name
(RefSeq) AP-3 complex subunit delta-1
KO
K12396
AP-3 complex subunit delta
Organism
tln Temnothorax longispinosus
Pathway
tln04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
tln00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
139809534 (Garnet)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tln04131
]
139809534 (Garnet)
Membrane trafficking [BR:
tln04131
]
Endosome - Lysosome transport
Others
AP-3 complex
139809534 (Garnet)
Endosome - Golgi transport
139809534 (Garnet)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
AP3D1
Cnd1
INTS1_R4
RTP1_C1
TOR1L1_N
RasGEF_N_2
Vac14_Fab1_bd
DUF4830
V-ATPase_H_C
Motif
Other DBs
NCBI-GeneID:
139809534
NCBI-ProteinID:
XP_071628573
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Position
3:5864364..5871148
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AA seq
1195 aa
AA seq
DB search
MALRKVKGNFERMFDKNLTDLVRGIRNNKENEAKYIAQCIEEIKQELRQDNVAVKANAVA
KLTYLQMLGYDISWAGFNIIEVMSSTKFTHKRIGYLAASQSFHADTELLMLTTNMIRKDL
NSQNQYDAGLALSGLSCFISPDLARDLVHDIMTLLTSTKPYLRKKAVLMMYKVFLRFPEA
LRPAFPRLKEKLEDPDSGVQSAAVNVVCELARKNPKNYLSLAPVFFKLMTTSTNNWMLIK
IIKLFGALTPLEPRLGRKLIEPLTNLIHSTSAMSLLYECINTVIAVLISISSGMPSHSDS
IQLCVQKLRILIEDSDQNLKYLGLLAMSKILRNHPKSVQSHKDLIMQCLDDKDETIRLRA
LDLLYGMVSKKNLMEIVKKLMVHMDKAEGTMYRDELLSKIIQICSQNNYHFITYFEWYIS
VLVELTRMEGTKHGPLVATQLLDVTIRVQAIRKYAVQQCALLLENSYLLTGQPRATMSEV
LYAAAWICGEFSSELEDPLATLQSMLRSQASSLPGHIQAVYVHNILKLAATTFAKAENEE
NTETIDKIYELKDKIATFVCSGDLEVQERSSSALVLLECLKENPGLAQELIKTFEGELNP
VAPKAQRKVPIPENLDLDSWINDPPSESSDSEDLDMNDIFIKTEKPNNSFSKRDLSEPSL
EELERRREARKLEQENNPHYLKGSFKTSTSYHNSSSAYEDFENIPFAELDIPISLKISNS
HRCRDVDSSHKRHKKHEKKKSKKNKDKKSASEEDEKDDSLPSQVVNTGIGELPPGAEISD
SDEYDLVDANDPHRALNIDLDMPLREDERLPVLEHRVIENKITKKAEEKENKKEKGHRKS
KRKVKNVMENKVNNERESSDLWLETNSSPEKVQSPAIGEYIEVSSEPQKESKRKKSKSQN
KHKKSNEEDTKHRKSKKSKSKKEHKSLDYEETAGISTPSKEILPELKDDIMNSEYNAITV
QQDISYEELAKNKVISMRYELRQIPHDSSKVIVTICVTNIGQPLVKELVFDVPDTSSLKL
VRNPGDEFGIKLPFQLPLQSSKETEFTVLVSDVTFAQKLRGTLTYMFESTEGTQQEKLDF
TVPLSCSKFMVGDLSHKDILTELLKSGQLVSKIRREVTPSKDFDTVLNIICRKCNLTLVE
QIDDTASLYGHSLKGHHVCLLLKYNRVTENLVIEGKGDNNSLLSGIGEEILRILT
NT seq
3588 nt
NT seq
+upstream
nt +downstream
nt
atggcactccgcaaggtaaaggggaacttcgagcggatgttcgacaagaatctgacggat
ctggtgcgcgggatcaggaacaataaggagaacgaggcgaagtacatcgcgcagtgtatc
gaggagatcaagcaggagttgcggcaggacaatgtggcggtcaaagccaacgccgtggcc
aagctgacatatctccagatgttggggtatgacatcagctgggccgggtttaacataata
gaagtaatgtcatcaacaaagttcactcacaagcgaatcggctatctcgctgccagtcaa
agctttcatgcagatacagagctattgatgctaacaacgaatatgattcgtaaagattta
aatagtcaaaatcagtatgacgctggtttagcgctgagtggtttgtcttgctttataagt
ccagatttagcacgtgacctggttcatgatataatgacattgttgacttctacaaagcca
tacttgcgtaagaaagcagttttgatgatgtataaagtatttctgagatttcccgaggcc
ctcaggcccgctttccctagattaaaggaaaagcttgaagatccagacagtggtgttcaa
agtgcagcggtaaacgtggtttgcgaattggccagaaaaaacccgaaaaattacctgagc
ttggcgcccgttttctttaagctgatgacaacttccacgaataattggatgcttatcaaa
attatcaaattgtttggagcattgacacctctagaacctaggcttggcagaaaattaata
gaaccccttaccaatttgatacacagtacatctgcaatgtccttattgtacgaatgtatt
aatacagtaatcgctgtattgatttctatatcgtctggtatgccgagtcactccgattca
atacagttgtgtgttcaaaaattgagaatattaatagaggactctgaccaaaacttgaag
tatctgggattgttggcgatgtcaaaaatattgagaaatcatccgaagagcgtgcaatca
cacaaagatctaattatgcaatgtcttgatgataaagacgaaactataagactgcgtgcc
ttggatttattgtacggaatggtttccaagaaaaacctaatggagatagttaagaagtta
atggtacatatggacaaagccgaaggcactatgtatcgcgatgaattgctctcaaagatt
attcaaatttgctcacagaataactatcacttcattacctactttgagtggtacatatct
gtattggtggaacttacacgaatggaaggcaccaagcacggaccattagtagcaactcaa
ttacttgatgtaacaattcgtgtacaagctatccgaaaatatgcggttcaacaatgtgcc
ttactgcttgagaattcatatcttttaaccggccagccaagggcaacaatgtctgaggtt
ttatatgcagcagcatggatttgtggagaattctctagtgaattagaagatcctttggca
acattgcagtctatgttgcgatcacaagcttctagtttgccaggacatatacaggctgtt
tacgttcataatatattaaagctggctgcaacgacattcgctaaagcagaaaatgaggaa
aatactgaaactatagacaagatttacgaattgaaggacaaaatagcaacttttgtctgt
agtggcgatctggaagttcaggaaagatcaagttccgcattagtactacttgaatgttta
aaagaaaatcctggtcttgcacaggaattaataaagactttcgaaggtgaacttaatcca
gttgcgccaaaggctcaaagaaaagttccaataccagagaatttagatttggattcctgg
atcaacgatccaccttcggaaagctcggattcagaggatttagatatgaatgatattttt
attaagacggagaaaccgaataattcattttccaaacgggatttaagtgaaccgtccctg
gaagaactcgaaaggagacgcgaagcgagaaaactagagcaagaaaataatcctcactat
ctgaaaggctcatttaagacttctacatcatatcacaactcatcgagcgcgtacgaagac
tttgaaaacattcctttcgcggaattagacatcccaatttctttaaagatttctaactcg
cacagatgtcgcgatgtagatagcagtcacaaaagacataaaaaacatgaaaagaagaaa
tcgaagaaaaataaagataaaaaatctgcgtcggaagaggatgaaaaggatgatagctta
ccatcgcaagtagtaaatactggaattggagaactacctccgggtgcagagataagtgac
agtgacgaatatgatttagtagatgcgaatgacccacatagagctttgaatatcgatttg
gatatgcctttacgagaagatgaaagattgcctgtcttagaacatagagttattgaaaat
aaaataacgaagaaagctgaagaaaaggaaaataaaaaagaaaaaggacatagaaaatct
aaaaggaaagtcaagaatgtcatggaaaacaaggtaaataacgaaagggagtcgtctgac
ttgtggttggaaactaattcgtcccccgagaaagtgcaatctcctgctataggagagtac
atagaagtgtccagtgagccacagaaagaaagcaaacgtaaaaagtcgaagagtcaaaac
aaacacaagaaatccaacgaagaagacacgaaacatagaaaatcgaagaaatcgaaaagt
aagaaagagcacaagtcgttggattatgaggaaacagctgggatatctactccatcaaaa
gagatattaccagaattaaaggacgatattatgaattccgaatataacgcaattactgta
cagcaagacatctcctacgaagaattagcaaaaaataaagtcatttccatgaggtacgag
ctgagacaaatccctcacgactcaagtaaagttatcgtaacgatttgcgttacaaatata
ggtcagccacttgtaaaagaattagtctttgacgttccagacacatcatcactcaaatta
gttaggaatcctggagacgaatttggaataaaactgccgttccaactgcctctgcaatct
agtaaagaaactgagttcaccgttctagtctcggacgtgacgttcgctcagaaactgaga
ggtacactgacatacatgttcgaaagtacagaaggcacgcaacaagaaaagctcgacttc
accgtgccgttgtcatgtagcaagttcatggtcggggatctctctcacaaggacatactc
acggaacttctcaaaagtggtcaattagtatctaagattagaagagaagtaactccttct
aaggactttgatacggttctaaatattatctgtcggaaatgcaatctcacactcgtggaa
caaattgacgatactgcatctttatatggacattctttgaagggacatcatgtgtgcctt
ttgttaaaatataacagagtgacggaaaatctagtgatcgaaggtaaaggtgacaataac
tcattactgtcgggaattggagaggagatcttgaggatcctgacataa
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