Temnothorax longispinosus: 139809646
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Entry
139809646 CDS
T10889
Symbol
Trf2
Name
(RefSeq) TATA box-binding protein-like 1
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
tln Temnothorax longispinosus
Pathway
tln03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
tln00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
139809646 (Trf2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tln03000
]
139809646 (Trf2)
03021 Transcription machinery [BR:
tln03021
]
139809646 (Trf2)
Transcription factors [BR:
tln03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
139809646 (Trf2)
Transcription machinery [BR:
tln03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
139809646 (Trf2)
RNA polymerase III system
TFIIIB
139809646 (Trf2)
RNA polymerase I system
SL1/TIF-1B
139809646 (Trf2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TBP
T19C3_2_like
SidM_Rab1-act
SCP1201-like
Motif
Other DBs
NCBI-GeneID:
139809646
NCBI-ProteinID:
XP_071628808
LinkDB
All DBs
Position
3:11959017..11966314
Genome browser
AA seq
306 aa
AA seq
DB search
MATAIQENGMKPLTNKSLNRVKDVNNLENANSCTENKDNRLFDGQLQSYVGHAEERHEAI
QEEPQEEAHEEPPELDIVINNVVCSFSVRCHLNLREIALKGSNVEYRRENGMITMKLRRP
YTTASIWSSGKVTCTGATSEIQAKIAARRFARCLQKLGFEVRFNNYRVVNVLGTCCMPFA
IKITSFSIHHKQNADYEPELHPGVTYKLKEPKATLKIFSTGSVTVTAPNVASVQAAIEHI
YPLVYEFRKERSVEDELALSAKKRKLNSNKRKLDEFLDDEPDISYESMISDAEDALDEVG
SEGSWD
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atggcaactgctattcaggagaatggcatgaaaccgttaacaaataaatcgctgaatcgt
gtaaaggacgttaataatttggaaaatgcaaactcctgtacagaaaataaggacaataga
ttgtttgatggtcaacttcaatcgtacgtgggtcatgccgaagagcgtcacgaggcgatc
caggaagaacctcaggaagaggcccacgaagagcctcccgagcttgatatcgttattaac
aatgtagtttgcagctttagcgtaagatgtcatttgaacctgcgagaaatagcgctcaag
ggatccaatgttgaatacagaagagaaaatgggatgataacgatgaaattaaggagacca
tatactacagcatccatctggtcatctggtaaagtaacttgcactggcgcaaccagtgag
attcaagcaaaaattgcggcacgcagatttgctcgttgccttcaaaaacttggattcgaa
gtgagatttaataattatagggtggtcaatgtattaggcacttgttgtatgccatttgcc
atcaagataacatcattttcgatacatcacaaacaaaatgctgattatgaaccggaatta
caccctggcgttacatataagttaaaagaaccaaaagctactctgaagatattttctaca
ggaagtgttactgtaacagcacctaacgttgcttcagtccaagcggcaattgaacatatt
tatccactagtctacgagttccggaaggagcgatcagtagaggacgagcttgcgttgtca
gcgaagaaacgcaagttaaactcgaacaaaagaaaactggatgagttcctagatgatgag
ccagatatctcgtatgaaagtatgatctctgatgcagaagacgcacttgacgaagtagga
agtgagggcagttgggactga
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integrated database retrieval system