Temnothorax longispinosus: 139809763
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Entry
139809763 CDS
T10889
Symbol
Not3
Name
(RefSeq) CCR4-NOT transcription complex subunit 3
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
tln Temnothorax longispinosus
Pathway
tln03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tln00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
139809763 (Not3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tln03019
]
139809763 (Not3)
Messenger RNA biogenesis [BR:
tln03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
139809763 (Not3)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
139809763 (Not3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
V-SNARE
FlgM
Motif
Other DBs
NCBI-GeneID:
139809763
NCBI-ProteinID:
XP_071629032
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All DBs
Position
3:9534635..9541557
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AA seq
688 aa
AA seq
DB search
MAATRKLQGEIDRCLKKVTEGVETFEDIWQKVHNATNSNQKEKYEADLKKEIKKLQRLRD
QIKSWIASGEIKDKSTLLDYRKLIETQMERFKVVERETKTKAYSKEGLGAAQKLDPAQKE
KDEITNWLASSIDALNLQMDTFESEIESLQAGKKKRIDKDKQDRVDELKAKLDKHRYHIR
KLETLLRMLDNMSVEVNTIKRIKDDVEYYIESSQDPDFEENEYIYDDIIGLDEVELSGVG
IPSSATTDSNNSNETGGTPTSTNSCTSPIPSPTLSSTMHNHSSDSSTDNDKKTKPVKPTA
VRPLLNTQASIPTTGSTATIKSNMLSSSTPSKTIPMTPSHSSPSSTSNHIATTNAGNFAT
VAASHSNSQAIHSTSNKTSTHNSENNILSSSSTSSVTSNVPQTVAQQHNNNPAPVQTTTH
VLHSQQSQNHNSETEMTTPVPPSSSPQSSVSSRSSPIPVNSCSPAPSTANGLIPKLPDGS
MSSLKSIAQQVIVRAGLEIPPSEPNRNIFDSAKTSNSSNSNATSEAHIPPLLGVAPLGPV
PLQKEHQLQFQMMEAAYYHMPHPSDSERLRSYLPRNTCTTPPYYQQVQLPHSDTVEFFQR
LSTETLFFIFYYMEGSKGQYLAAKALKKQSWRFHTKYMMWFQRHEEPKVINEEYEQGTYI
YFDYEKWGQRKKEGFTFEYKYLEDRDLN
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgacaaggaagttgcaaggtgaaatagatcggtgccttaaaaaagtaacggaa
ggtgtggaaacctttgaggatatctggcaaaaagttcataatgccacgaacagcaatcag
aaggaaaagtacgaggctgatctcaaaaaggaaatcaagaaacttcaaaggttacgcgat
caaattaagagctggatcgcgtcgggtgaaataaaggacaagagtacgcttctcgactat
cggaagttgattgaaactcaaatggaaagatttaaagttgtagaaagagagacgaaaaca
aaggcttattctaaagaaggtttaggcgctgctcagaaattggacccagctcagaaagag
aaagatgagattactaattggctggccagttctatagacgctctcaatctgcagatggat
acatttgaatcggaaatagaatcgttacaggcgggaaagaagaaaaggatagacaaagac
aagcaagatagggtggacgaattgaaggcaaagctggacaaacaccgctaccatatccgt
aaattggagacgttattacgtatgcttgataatatgtctgtcgaagtcaacacaattaag
aggataaaggacgatgttgagtattacatcgaatcttcgcaagatcctgattttgaagag
aacgaatatatttacgatgatattatcggcctcgatgaagttgagttgtccggagttggc
atcccctcgtcagcaacgacggatagtaacaacagcaatgaaaccggaggaacgccaacc
tcaactaattcctgtacttcgcctataccgtcgccaacgttgagctctactatgcataac
cattcgagcgatagttctacagataatgacaagaaaaccaagcctgtgaaaccgacagca
gttaggccgctactgaatacgcaagcgagcattccaactacgggaagcactgccaccata
aaatcgaacatgttatcgagcagcactccaagcaaaaccattcccatgacacctagccat
agctcgcctagttctacgagcaatcacattgccacgactaatgccggcaatttcgccacc
gtagctgcctcgcacagcaattcgcaagccatccattctacctccaacaaaacatccact
cataacagcgagaataatatcttgtcatcatcatctacgtccagcgttacgtcgaatgtg
ccgcaaaccgttgcgcaacagcacaataataatccggcgccggtacagacgacgacgcac
gtattgcacagtcagcagagtcagaatcacaatagcgaaacggaaatgactacaccagta
ccaccatcttcgtcgccgcagtcgtcggtcagcagtagatcctcgccgatacccgtaaac
tcctgctcgccagcaccgtccactgccaatggtctcatccctaagcttcccgatggaagc
atgtcctctctaaaatccattgcccaacaagtaattgtccgagcaggtctcgagatacca
ccttctgagccgaatagaaacatctttgacagtgccaagacgagcaacagcagcaacagc
aacgccacgtcggaagcacacattcctccgctgcttggggtcgcgcctctaggacccgta
ccgttacagaaagaacaccaactgcagttccaaatgatggaagccgcctactatcatatg
ccacatccgtctgactcggaaagattacgttcgtatttgccgagaaatacatgcaccacg
ccaccttattatcagcaggttcagcttccccattcggatacggtggagttcttccaacgc
ctttctacggaaactttgttcttcatattttattatatggaggggtctaaagggcagtat
ttagcagcgaaggctttgaagaaacaaagctggaggtttcatactaagtatatgatgtgg
ttccagaggcacgaggaaccgaaagttattaacgaggaatacgagcagggaacgtacatc
tattttgactacgaaaaatgggggcagaggaaaaaagaaggatttactttcgaatacaag
tacttagaggacagagacctgaattaa
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