Temnothorax longispinosus: 139809965
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Entry
139809965 CDS
T10889
Symbol
Caper
Name
(RefSeq) RNA-binding protein 39 isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
tln Temnothorax longispinosus
Brite
Spliceosome [BR:
tln03041
]
Common components
Common spliceosomal components
General mRNP proteins
139809965 (Caper)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
Nup35_RRM_2
RRM_7
PFF1_TM
Motif
Other DBs
NCBI-GeneID:
139809965
NCBI-ProteinID:
XP_071629374
LinkDB
All DBs
Position
3:13975421..13985313
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AA seq
565 aa
AA seq
DB search
MDSFIYKYIYIKKIHIYVEQSTPLSLMYQLLINTSVFCTYRWYVTCTLALIGCAPASSLH
LKDDEEQDSSSKDKSSKENGSSRKSSGKSKHRSRSRSRSRDRDRRDKDRRDRDRDRDRDR
DRGDRDRDRGDRDRRRRSRSRDRRDRDRDRDGERDRDRRDRDRDRDRRRKRSLTPLTLPR
ARPPFGKGHSPLGINDELTPEERDARTVFCMQLSQRIRARDLEEFFSSVGKVQDVRLITC
NKTRRFKGIAYVEFKDPESVTLALGLSGQKLLGVPIVVQHTQAEKNRMGNSMPNLMPKGQ
TGPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIQLIMDPETGRSKGYGFLTFRNADDAKK
ALEQLNGFELAGRPMKVGNVTERTDLIQGPSLLDTDELDRSGIDLGATGRLQLMFKLAEG
TGLEIPPAAANALNMAPVMAQPQPPPQAAPPIATQCFMLSNMFDPQNETNPNWAKEIRDD
VIEECNKHGGVLHVYVDQASPQGNVYVKCPSIATAVAAVNSLHGRWFAGRVITAAYVPVV
NYHSLFPDAMTALQLLVPSAPRRGM
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atggatagttttatatacaagtatatatatataaaaaaaatacatatatatgtagaacaa
agtacgcccttgtctctgatgtatcaactattgatcaacacctccgttttctgtacttat
agatggtacgtaacatgtaccctcgcgctcataggatgtgcgccagcgagttccttgcac
ttgaaagacgacgaggagcaggactcctcttccaaagacaagtcctccaaggagaatggg
tctagtcgcaaatcgtctgggaaaagcaaacatcgctcgcgttctcgttcacgatcccga
gatcgcgatcgccgagacaaagatcgacgggatcgcgacagagacagggaccgagaccgc
gatcgcggcgacagggatcgcgatcgcggcgatcgcgatcgtcgacgaagatcaagatcg
cgcgacagacgggatcgggacagggatcgggacggcgaacgagatagggacagacgagac
agagatcgggacagggacagaaggaggaagagatcgctgacaccattgacccttcctaga
gcccgaccgccgttcggcaaaggtcacagtccgcttggaataaacgatgaattaacacca
gaggaacgagatgctcggactgtcttttgtatgcagttaagtcagcgaattcgtgcgcgc
gatttggaagaattcttctcaagcgtcggcaaagtacaggatgtcagacttatcacatgc
aacaaaactcgaagatttaaagggattgcttatgtagagtttaaagacccagagagtgtg
acacttgctcttggtctatcgggtcaaaagcttcttggagtgcctatcgtagtacagcat
acacaggctgaaaagaatcgcatgggtaattcgatgccgaatctaatgcctaagggacaa
acaggacccatgcgattatacgtaggatctctacactttaacattacagaagatatgctt
cgcgggatctttgaaccctttggaaagattgacaacatacagttgattatggatcctgaa
acggggcgcagcaagggttacggtttcctgactttcagaaatgcagacgacgcaaaaaaa
gcgttggaacaactgaatggattcgagctcgctggtagacctatgaaagttggaaacgta
acggaacgaaccgacttgattcaaggaccttccctactcgatactgatgagctagatcgt
agtggaattgatctcggagcgactggaaggttacaattgatgttcaaattggcggaaggt
actggcctggaaattcctcccgctgcagcaaacgctttaaatatggcaccagtaatggcg
cagccgcaaccaccacctcaagctgcacctcccattgcgacacagtgtttcatgttatcg
aacatgtttgatccgcaaaatgagacgaatcctaactgggcaaaagagatccgcgatgac
gtgatcgaggaatgtaacaagcatgggggcgttctgcacgtatatgtggatcaagcatca
ccgcagggcaacgtttacgtgaaatgcccgtcgatcgcgactgccgtggcggcggtgaac
tcgttgcatggtcgatggttcgctggccgtgtcataaccgcagcctacgtaccggtggtg
aattatcactcgttattccccgatgcgatgactgcgttgcaactgttggtgccaagtgcg
ccgcgaagaggaatgtga
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