Temnothorax longispinosus: 139810542
Help
Entry
139810542 CDS
T10889
Name
(RefSeq) CUGBP Elav-like family member 1-A isoform X1
KO
K02177
bruno
Organism
tln Temnothorax longispinosus
Pathway
tln04320
Dorso-ventral axis formation
Brite
KEGG Orthology (KO) [BR:
tln00001
]
09150 Organismal Systems
09158 Development and regeneration
04320 Dorso-ventral axis formation
139810542
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tln03019
]
139810542
03041 Spliceosome [BR:
tln03041
]
139810542
Messenger RNA biogenesis [BR:
tln03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
139810542
Spliceosome [BR:
tln03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
139810542
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_10
RRM_YTH1
ElaD-SseL-like_C
Motif
Other DBs
NCBI-GeneID:
139810542
NCBI-ProteinID:
XP_071630273
LinkDB
All DBs
Position
3:23257316..23754701
Genome browser
AA seq
626 aa
AA seq
DB search
MYPSMRRVMRLIPIVPCKVSKVSRDHKRRYRQFLRVNVSRHRVVSECVDEDATTDQRRIE
ERRRWPGRHRATAAQPWDQRRVTTPLLRIGRIMNNNSVEQPDPDNIKMFVGQVPHDMDEN
DLRMMFEEYGRVHQINILRDKITGSHRGCCFVTFYTRKAALAAQNALHNVKTFSGMRHPI
QMKPADSENRNERKLFVGMLSKKFTENDVRNMFSAYGMIEECSVLRDSTGKSKACAFVTY
ASKQYAINAIKALHHSQTMEGCSSPLVVKFADTQKEKDQKRMQQIQSNLWNIAGVNITPH
YLANDAHTLTPASLQLLQQLQATTSAATPVAANAGAANALSNVQHQLLLQQHLGLGAATP
AHAAPPAVPSPAEINPANLQSLATLASLSNTAGEYANAGVSPMSMQNLVTLAAMTGGNGN
LQVSPNTLSGLANSTAGMSLSALLGKTGNTGSTGGSLSPVTSLTLNSLTGTPLNGLQDSL
SNAYSSLQQYAALIGKTTVTVEKKELHRFPAFTAAAAAAAAAAQKTKFSSTDKQIEGPEG
CNLFIYHLPQEFSDTDLISTFLPFGNVISAKVFIDKHTHMSKCFGFVSYDNASSAQAAIQ
TMHGFQIGMKRLKVQLKRSKDASKPY
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgtatccaagtatgcgccgcgtcatgagattaataccgatagtgccgtgcaaagtgtcg
aaagtatcgcgcgatcataagcgacggtatcgtcaatttttgcgcgtgaacgtttcgcgt
caccgcgtcgtgagtgagtgcgtcgacgaagatgcgacgacggatcagcggaggatcgag
gagaggaggaggtggcctgggaggcatcgggcgacagcggcacaaccgtgggatcagcgc
agggttacaactccgctgttgcgcatcggtcgtataatgaacaacaacagtgtggagcag
ccagatccggataacataaagatgttcgtgggacaggtacctcacgatatggatgagaat
gatctgaggatgatgtttgaggaatatggtcgagtgcatcagataaatatcctgcgggac
aagatcaccggcagtcataggggatgttgctttgtaaccttttacactagaaaagcggct
ttggcagcgcagaacgctcttcataacgtcaagaccttcagcgggatgcgccatccgatc
caaatgaagccggccgacagcgagaaccggaatgagcgcaagctgttcgtcggcatgcta
tcgaaaaaattcacggaaaacgacgttaggaacatgtttagcgcttacggaatgatcgag
gaatgctcggtgctgagggacagtaccgggaaaagtaaagcctgtgccttcgttacctac
gctagtaagcagtacgcgatcaatgccatcaaagctctgcatcattcccagacaatggag
ggctgttcgtcgccattagtcgtaaaattcgccgacacgcaaaaggaaaaggaccagaag
aggatgcagcaaatccagtcgaatctctggaacatcgcgggagtcaacatcacaccgcat
tacctagccaacgacgcgcataccttgacgcccgcatcgttgcagcttctgcaacagttg
caggcgacgacgagtgccgcgaccccggtcgccgcgaacgcgggagcggcgaatgcattg
tcgaacgtacaacatcagttgctactgcaacaacaccttggccttggtgcggcaacacct
gcgcacgcggcaccccccgctgtgcccagtccggcagagatcaaccccgcgaatctgcaa
agtctagctaccctcgcgtccctgagtaacaccgctggtgagtatgcgaacgcgggcgtg
tcgccaatgagtatgcagaacctcgtcactctggcagctatgaccggcggaaacggcaat
ctccaggtgtcgccaaacacattaagcggcctggcgaattcgacagcaggtatgtcgcta
tctgctcttctgggaaaaacaggaaatacagggtctactgggggcagtcttagtcctgta
acatctctcacgctcaattccttgacggggacgccgttaaacgggcttcaggactcgctg
agcaacgcctattccagcttacagcagtatgcagctctcattggaaagacgacggtgacc
gtggaaaagaaagagttgcataggttccccgcgttcacggcagctgcggctgctgcggcg
gcggcagcgcagaagacgaagttcagcagcacggacaagcagatcgagggtcccgaaggt
tgcaatctctttatctaccacctgccgcaagaattcagcgacacggacctcatctctacc
tttttgcccttcggcaacgtcatatccgccaaagttttcatagataaacacacgcacatg
agtaaatgctttggtttcgtgtcgtatgacaatgcgtcgagcgcgcaagcggcgatccaa
acgatgcacggtttccagattggcatgaagcgactgaaggtccagttgaaacggtccaag
gacgcctccaagccatactag
DBGET
integrated database retrieval system
