Temnothorax longispinosus: 139810735
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Entry
139810735 CDS
T10889
Symbol
Usp39
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 39
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
tln Temnothorax longispinosus
Pathway
tln03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tln00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
139810735 (Usp39)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tln03041
]
139810735 (Usp39)
Spliceosome [BR:
tln03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
139810735 (Usp39)
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Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
139810735
NCBI-ProteinID:
XP_071630651
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Position
3:complement(14673691..14676269)
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AA seq
522 aa
AA seq
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MFIWADSRNQKWPEMASDRRGTQLKRNVVDTGSDSDNETERNAKHVKMKSEAPRLCPYLD
TINRHVLDFDFEKLCSVSLSRINVYACLVCGKYFQGRGTNTHAYTHSVAESHHVFLNLHT
LKFYCLPDNYEIVDSSLDDIKYVLNPTFDKMQIAHVDKSDKQSRAIDGSMYSPGIVGMNN
IKANDYCNVILQALSHVTPLRDFFLRESNYFHVRRPPGDSSYLLVQRFGELMRKLWNPRN
FKAHVSPHEMLQAVVLWSKKRFQFTEQGDPVDFLSWFLNALHLALNGTKKRASSIIYKTF
LGHMRIYTRKIPPLELEESQRSELLNTVEYGETVTESPFLYLTCDLPPPPLFKDQFTENI
IPQVNLYTLLNKFNAVTEKEYKTYKENFMKRFEITELPPYLILYIKRFTKNTFFVEKNPT
IVNFPVKNVDFGDILTPEVKAKHPYTTYDLVANIVHDGEPGQGTYRVHILHRATGQWYEL
QDLHVTQILPQMITLTEAYIQIYELKKDTHMENGDNKNKKTM
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgtttatatgggcagattccagaaatcagaaatggccagaaatggcgtccgatagacga
ggtacccagttgaaacggaacgtggttgatactgggagcgactcggataatgaaacagaa
aggaatgcaaagcatgtgaaaatgaaatcagaggcaccacgactgtgtccgtacttggat
acgattaatcggcacgttttggattttgattttgaaaaattatgctccgtatcactgtcc
aggatcaatgtatacgcttgtctggtttgcggcaaatacttccaaggcaggggaactaat
acccacgcttacacacatagcgtggcagagagtcatcatgtctttcttaatttacacaca
cttaaattttattgtttaccagataattacgagatagtggattcgtccttggatgatatc
aaatatgtgttaaatccaaccttcgacaaaatgcaaatagcccacgtagacaagagcgat
aaacagtctagagcaatcgacggctctatgtattcgccgggaatagtaggcatgaataac
ataaaagcgaatgattactgcaacgtcattttacaagcgctttcgcacgtgacacctctg
agagatttctttttacgagagtccaactatttccatgtaaggagaccacctggtgattcg
tcgtatcttttggtacaaaggtttggagagcttatgcgcaaattatggaacccacgtaat
ttcaaagcgcacgtaagtcctcatgaaatgctgcaagcggtagttttgtggagtaaaaaa
agatttcagttcacggagcaaggcgatccggtggattttttatcatggttcctaaatgct
ctccatctggcgttaaacggtacaaagaagcgtgcgtctagcataatttataaaacattt
ttgggtcatatgcggatatatacgcggaagattccgccgttggaattagaagagagccaa
agaagcgaattattgaacacggtggagtatggcgagactgtgacggaaagtccattttta
tatctcacttgcgatcttccgccacctccattatttaaagatcaatttacggagaatatt
attccacaggtaaatctgtacacgcttttgaacaaatttaacgccgtcactgagaaagaa
tataaaacttacaaggaaaatttcatgaaaagatttgagattaccgagctgccaccatat
ctcatactttacataaaaagattcacaaaaaatacattttttgttgaaaaaaatccaaca
attgtgaatttccccgttaaaaatgtcgatttcggagatattttaacaccggaagtaaaa
gccaagcatccatatacaacgtacgatctagtagccaatatagtacacgatggtgaacct
ggtcaaggaacgtatagagtccatattttgcatagagccactggtcaatggtacgaattg
caagatttgcacgtcactcaaattttgccccaaatgatcactctcaccgaagcatatata
cagatttatgaattaaagaaagacacgcacatggaaaacggagataataaaaataaaaaa
actatgtga
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