Temnothorax longispinosus: 139811361
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Entry
139811361 CDS
T10889
Symbol
Rrp1
Name
(RefSeq) exodeoxyribonuclease isoform X1
KO
K10771
AP endonuclease 1 [EC:
3.1.11.2
]
Organism
tln Temnothorax longispinosus
Pathway
tln03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tln00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
139811361 (Rrp1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tln03400
]
139811361 (Rrp1)
Enzymes [BR:
tln01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
139811361 (Rrp1)
DNA repair and recombination proteins [BR:
tln03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
139811361 (Rrp1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-GeneID:
139811361
NCBI-ProteinID:
XP_071631723
LinkDB
All DBs
Position
4:complement(22057398..22060674)
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AA seq
367 aa
AA seq
DB search
MLFSLRKEQGLSMPRKRLNKAKVDSPKAKPGKKTEKLNENGASVKKRANDTNDEPTPKRL
KTDSKGLKSADKGDSSTAKKAKNEPKQMLNKTDTNLDEIDFGCTKLNEEGKKYNLKICTW
NVSGVRAVIKKHGADYIVKEDPDIIALQETKCDKDKMPDEVKLSGYHHYFLDSKKSGYCG
VALFSKEKPISVKYGLNDSTFDSEGRMITAEFPEFFVINVYVPNAGQKLVTLPKRLEWNK
AFKKWIEELDQKKPVIICGDMNVAHQEIDLKNPKTNNKNAGFTKEERDDMTDFLAAGFVD
TFRLLYPETEGAYTFWSYFANSRGKDIGWRLDYFLISERIKNKVCDNIIRKQVYGSDHCP
VILYINL
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgttattctctcttcgcaaagagcagggcctcagcatgccacgaaagcgtcttaataaa
gcaaaggttgattctcccaaagctaaacctggtaagaaaacagaaaaattaaatgaaaat
ggagcttcagttaaaaaacgtgcgaatgatacaaacgatgaacctaccccaaagaggctg
aaaaccgattcgaagggattaaaaagcgccgacaaaggtgattcatctaccgcgaagaag
gcgaagaatgaacccaagcagatgctaaataaaacggatacgaacttggatgagatagat
tttggatgtacgaagttaaacgaggaaggaaagaagtataatctgaagatctgtacttgg
aatgtttctggggtccgggctgttatcaaaaaacatggagctgactatattgtaaaagaa
gatccagatataattgctttgcaagaaaccaaatgcgacaaggataagatgccagatgaa
gtcaaattgtcaggatatcatcactattttcttgacagtaaaaaatcaggttattgtgga
gtcgctttgtttagcaaggaaaagccgatttctgtgaaatacggtttaaatgattctacc
tttgacagcgaaggcagaatgatcacggcggagttcccagagttttttgtgattaatgtt
tatgtgccaaatgccggacagaagttggtgacattaccaaaaagattggaatggaataaa
gcattcaagaaatggattgaggaattagatcaaaagaagcctgttatcatatgcggcgac
atgaatgtagctcatcaagaaattgatttaaagaatcccaaaacaaacaataaaaatgct
ggttttactaaagaagaacgagatgatatgaccgactttttagctgccggatttgttgat
accttcagattattatatcccgaaacagagggtgcatatacattctggtcgtattttgcc
aattcacgcggtaaagatattggatggcgactagactatttcttgatatcagaacggatc
aaaaataaagtgtgcgataatattataaggaagcaagtttatggcagcgatcattgtcct
gtaatactttacattaatttgtaa
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