Temnothorax longispinosus: 139811644
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Entry
139811644 CDS
T10889
Symbol
Dbp80
Name
(RefSeq) DEAD-box helicase Dbp80
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
tln Temnothorax longispinosus
Pathway
tln03013
Nucleocytoplasmic transport
tln03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tln00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
139811644 (Dbp80)
03015 mRNA surveillance pathway
139811644 (Dbp80)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tln03019
]
139811644 (Dbp80)
Enzymes [BR:
tln01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
139811644 (Dbp80)
Messenger RNA biogenesis [BR:
tln03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
139811644 (Dbp80)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
AAA_30
Motif
Other DBs
NCBI-GeneID:
139811644
NCBI-ProteinID:
XP_071632066
LinkDB
All DBs
Position
4:complement(5567383..5570920)
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AA seq
481 aa
AA seq
DB search
MASTKVDWGQYADEQDKLASKVTSLNLDKPNSTPVPTPSVKDGDIKSDDDTSEEQISPAE
KSLLQKIIRKGLVETTKAVEVQRKDPNSPLYSVKTFDALHLKPALLKGVYAMGFNAPSRI
QETALPTLLADPPQNMIAQSQSGTGKTAAFVLAMLSRVDPAKDYPQVLCLSPTYELAIQT
GEVAARMSRFCPEIKIKYAVRGEEISRGSKITDHIIIGTPGKVLDWGQKFKFFDLSKISV
FVLDEADVMIATQGHQDQCIRIHKLLPRTCQMMFFSATYEPEVMNFAEIIVSNPLIIRLL
REEESLDNIKQYYIKCKNLDEKYTAITNIYGVITIGQAIIFCHTKNTASWLAEKMTKDGH
AVAILSGDLTVEQRISVLDRFRAGLEKVLVTTNVLARGIDVEQVTIVVNFDLPMDQKKQA
DCETYLHRIGRTGRFGKSGIAINLIDSPKAMQLCKDIERHFGKKIHYLDAEDADEIEKIG
A
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgactaaggtcgactggggacagtacgccgacgaacaggacaaattagcatcg
aaggtgacgagtttgaacctggataaaccgaactcaacacccgtccctaccccatctgtg
aaagatggagacatcaagagcgatgacgatacgtcggaggagcagatctcaccggcggaa
aagtcgctcctgcagaaaattatcaggaaaggattggtcgagacgacaaaggctgtagag
gttcaaaggaaggatccaaattcaccattatacagtgtcaaaacctttgacgcacttcat
ctcaaacctgccttgttaaaaggtgtttacgctatgggattcaatgcaccctcgagaatt
caagaaaccgctttacccactttactcgccgatccgccgcagaacatgattgcgcaatcc
caatctggtacgggtaagacggccgcgttcgtactcgccatgttgagtcgggtagatccc
gcaaaagattacccacaggtactttgtttatcgccgacttacgagctggcgatccaaact
ggcgaagtagcggcgaggatgtcgcgcttttgccctgagataaaaattaagtacgctgtg
agaggagaagaaataagccgtggctcgaagatcaccgatcacattattataggaactccg
ggtaaagtgcttgattggggacaaaagtttaaattctttgatctaagcaaaatatcagtg
tttgtattggacgaagctgacgttatgatcgctacacaaggccatcaagatcagtgtatc
cgtattcacaaattactgccacgtacatgtcaaatgatgttcttctctgcgacatacgag
ccagaagtgatgaactttgcggagattatagtcagtaatccgctaataatacgattatta
agagaagaagagagtttggataatattaaacagtactatatcaagtgcaaaaatttagac
gaaaaatatacggctatcactaatatctatggcgtgatcaccattggacaagcgattatt
ttctgtcacacgaaaaatacggccagttggttagcagagaaaatgacgaaagacgggcat
gcggtagcaatattgtctggggacttgacagtcgaacaaaggatttctgtgctggataga
tttagagcaggacttgagaaagttcttgtcactacgaatgttttagctagaggcatcgat
gtagagcaggtgacgatagtggttaactttgatttgccgatggaccaaaaaaagcaagcc
gattgtgagacgtacttgcacagaatcggaagaacagggcgattcggcaaatcggggatc
gccattaatttaatcgactcgccgaaggcaatgcaactgtgcaaagacatagagagacac
tttggcaagaagatacattatcttgacgcggaagatgcggatgagattgaaaaaatcgga
gcttag
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