Temnothorax longispinosus: 139811799
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Entry
139811799 CDS
T10889
Symbol
Cpsf73
Name
(RefSeq) cleavage and polyadenylation specificity factor 73
KO
K14403
cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
Organism
tln Temnothorax longispinosus
Pathway
tln03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tln00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
139811799 (Cpsf73)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tln03021
]
139811799 (Cpsf73)
03019 Messenger RNA biogenesis [BR:
tln03019
]
139811799 (Cpsf73)
Transcription machinery [BR:
tln03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
139811799 (Cpsf73)
Messenger RNA biogenesis [BR:
tln03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
139811799 (Cpsf73)
U7-dependent histone pre-mRNA processing factors
139811799 (Cpsf73)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CPSF73-100_C
Beta-Casp
Lactamase_B_6
Lactamase_B
RMMBL
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B_3
Gp58
Motif
Other DBs
NCBI-GeneID:
139811799
NCBI-ProteinID:
XP_071632309
LinkDB
All DBs
Position
1:5659716..5662395
Genome browser
AA seq
686 aa
AA seq
DB search
MSSKRKSDAQVPAEESDLLSIRPLGAGQEVGRSCIMLEFKGKKIMLDCGIHPGLSGMDAL
PFVDLVEADEIDLLLISHFHLDHCGALPWFLLKTSFKGRCFMTHATKAIYRWLLSDYIKV
SNIATEQMLYTESDLEASMDKIETINFHEEKDVFGIKFWAYNAGHVLGAAMFMIEIAGVK
ILYTGDFSRQEDRHLMAAEIPNIHPDVLITESTYGTHIHEKREDREGRFTNLVHEIVNRG
GRCLIPVFALGRAQELLLILDEYWSQHSELHEIPIYYASSLAKKCMAVYQTYVNAMNDKI
RRQIAINNPFVFKHISNLKGIDHFEDIGPCVVMASPGMMQSGLSRELFESWCTDAKNGVI
IAGYCVEGTLAKTILSEPEEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRTLKPPH
VVLVHGEQNEMGRLKAALQREYEDDPNTTMEIHNPRNTVAVELYFRGEKTAKVMGTLAME
APRPGQKLSGVLVKRNFNYHMLAPCDLSKYTDMSMSQVIQRQSVYFSASLPVLKHLLTQI
AGSLEVVDDKKLRVFKNVDVTIDGKIVTMEWIATPVNDMYADSVLTAILQAEIMDQSPKV
LPAPTKMDRMHFKECLIEMLQEMFGEDSVPKIFKGEKLYVTVDGKKAHIDLLNLEVTSKE
DETFQQIVQTAVTKLHQSLAPPCDVI
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgaagagaaagagcgacgcgcaagtgccggccgaggagagcgatctgctctcg
atccggccgctcggcgcgggccaggaggtcggcaggtcgtgtatcatgttagaattcaaa
ggtaagaaaattatgctggactgcggcatacatcccggtctttcgggcatggacgccctg
ccgttcgtcgacctcgtcgaggccgacgagatcgacctcctgctgatctcccactttcac
ctggaccactgcggcgcgctgccctggtttctgctgaagacgagcttcaagggtcgttgc
ttcatgacgcacgccaccaaggccatttatcgctggctactgtcggactacatcaaggtg
agcaacatcgccaccgagcagatgctgtacacggagtccgatctggaggccagcatggac
aagatagagacgataaacttccacgaggagaaggacgtgttcgggatcaagttctgggcg
tacaacgccggccacgtgctgggcgccgctatgttcatgatagagatcgccggtgtgaag
atcctgtacacgggggacttcagccgacaggaggaccggcacctgatggccgccgagata
ccgaacattcaccccgacgtgctgatcacggagtccacctacggcacgcacatccacgag
aagcgggaggatcgcgagggcagatttacgaatctcgtgcacgagatcgtcaacaggggc
ggcagatgcctgatacccgtgttcgctctgggaagggcgcaggagctccttctcattctg
gacgagtactggagccagcattcggaactgcacgagataccgatctactacgcctcctcc
ttggcgaaaaagtgcatggccgtttatcagacatacgtgaacgccatgaacgacaagatc
agacggcagatagctatcaataatcctttcgtgttcaagcacatttctaatttgaagggg
atagatcacttcgaggatattggaccgtgcgtggtgatggcctcgcccggtatgatgcag
agcggcttgtcgagggagctgttcgagtcctggtgcacagatgcgaaaaatggggtgatc
atagccggctactgcgtggagggaacgctggcgaagacgattctgtcggagccggaggag
attacgactatgtccgggcaaaagttaccgttgaagatgtccgtcgactacatatcgttc
tcggctcacaccgattaccagcaaacttcggagtttatacggactttgaagccgccgcac
gtggtgctggtgcacggcgagcagaacgagatgggcaggttgaaagcggcgttgcaacgg
gagtacgaggacgatcccaacaccaccatggagatacacaatccgcgaaacacggtcgcg
gtggagctctacttcaggggcgagaagaccgccaaggtgatgggcacgctggcgatggag
gctcctagaccggggcagaagttatccggcgtgttggtcaagagaaacttcaattatcac
atgctagccccgtgcgacctgtccaagtacacggacatgagtatgagccaagttatacag
cggcagagcgtgtacttctccgcgtctttgccagtgttgaagcaccttctgacgcagata
gccggcagcctggaggtcgtggacgacaagaagctgagggtattcaagaacgtcgacgtc
acgatcgacggcaagatcgtcacgatggagtggatagcgacgccggtgaacgacatgtac
gcggattccgttctcacggcgatcctgcaggccgagataatggaccagtcgccgaaggtg
ttgcccgcgcccaccaagatggacaggatgcactttaaggagtgcctcatagagatgctg
caggagatgttcggcgaggattccgtgcccaagatattcaaaggagagaaactctatgtc
acggtagacggtaagaaagcgcatatagacctgctgaacttggaggtgaccagcaaagag
gacgaaacttttcagcaaatagtgcaaacagcggtgacgaaattgcatcagtcgttggcg
ccgccttgcgatgtaatatag
DBGET
integrated database retrieval system
