Temnothorax longispinosus: 139811850
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Entry
139811850 CDS
T10889
Symbol
Nup98-96
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96 isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
tln Temnothorax longispinosus
Pathway
tln03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tln00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
139811850 (Nup98-96)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tln03019
]
139811850 (Nup98-96)
03036 Chromosome and associated proteins [BR:
tln03036
]
139811850 (Nup98-96)
Messenger RNA biogenesis [BR:
tln03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
139811850 (Nup98-96)
Chromosome and associated proteins [BR:
tln03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
139811850 (Nup98-96)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
139811850
NCBI-ProteinID:
XP_071632373
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All DBs
Position
4:complement(5739572..5753457)
Genome browser
AA seq
1920 aa
AA seq
DB search
MFGQTGNTSFSGFSTATQNSPFGQSAFGKPITTTSFGSGATPVFGSNNTSSLFSSKPTGS
TTGGLFGNTTTPPAFRQPTNTQPSFGGFGTTNTSTNLFGTQQNAGTNLFGTSTGTSAFGQ
ANKPGFNFGTTSGTNLFGQPQQNAQQTTPFGQANTTTNTNLFGTTTGFGNTNPTTVPAGT
AVKFTPVITTDSMSKNGISHSISARHCCIASMKEYESKSYEELRFEDYQLGRKGPQTGLF
GTSAQTSPFGSTSAGTSTAGTGFGSMTGGFGTTSQSGSTGLFGKPITNFGTPATTTTNSF
AFNSTPTTNLFGTNTQTKPFGTAAPTPLFGTSSTNQTAGTGFGSINTGQNTGFGSAFGST
QPNQSIGLFNQNKSAFNIPSTSTSTGFTGFGQPATNTTTPLFGNKTTTTGFGTTSTFGAA
APSTFGTNTGFNSGTNPGSSLFNSSFKPAGQTSGFSFGTTPASSTGLGTNTGLSLGGGSS
LFGQQKPGSLFGNTGNNTTFNNPGTFGSSTFGTSSNMMSGTGVGLLNGGAVSNQAKANGS
VPVHQQILALVSAPFGDSPLLKNLLPASGKTEELLKPTNPASKVLNSPQYRVTANNKSPK
IKARVVSSAQLSKKSLFDGLEEEDPVITEAFQPRPSAKRLVLRPKSATNSSVQSPIENGE
SVTRNGTAEDRADTSNVVHSNNIEVNDKENHSQDNNRLANDRRSSTSWLKSTLPQKNKIS
DDELLEGQRSPFSGTNVPEEVNNTVAELRSQNSTSSINHSEIINSIEVPLNSTFDEKNSA
NLTMPNAESGQETDESSLLMLQSNWSVNMAKVTLRRAGYYTIPSLDKLDDFVCGETCVVP
NFTIGREGYGNVYFPDSFDVYGLNLDEIVHFRHKEVIIYPDDEKKPPVGQGLNRRAQVTL
DKVWPHDKSLHEPITDPQRLAAMNYEGKLRRVSAKHDTRFLEYRPETGSWVFKVDHFSKY
GLSDSDEDDNQIPPISEAKKLKGFPAPVQKGKPIDPSTATNKEAINGMMINGTLESMKIG
NGKEHPNIVENNFLGKTPISRFAYNDHSYKERGMIVSPGGETPFGRSGFVPGDYNYEKRM
TVSPVGDNARVTGTDSHKLQLMKASFFDVNDEDVNEEANNGIFPSVQKTLIRYFPDVTEA
KSDEAPYNATTLRTTLVAHETLFSTCSPENVLSTSSRISHLPRIGARDKQIIERAIPPPV
VTPVTSVLKYHYEVVPLEESRLNRLRFRCIADAGIYMGRTFRPSWGAGLTLLSLSTQEQA
TKMQLRSTFSQLSRYLSGRLADDISSTVIVQRLQILGGDEYDTKTFKDSIERHLRIQLDH
CVMGHEGDCPTFDVATDSANEALQLHCTLAQDLAEQEQRPSEDANDEQMQCGSASERSFR
QYASIVWTLCVALWGNYADQDMADNANEEHYNVMVRREAVGDWLRNVVQKTVEREIKSID
GETKNSHEKIILSLLSACKLEDACQEARKAGDHCLALLMAQLRSGATVKKLIKQQLALWQ
ETDVDENLTIDRLKLFMLVAGEPLISSKHGTINVCEDLDWKRAFATHLWYLSPPTCSITD
ALDLYEMSFNATEAQGYAAVPEPEYRENEYDAELSNGKRIHDLCFHLLKLYCTGNHDLGE
LLNPLSYTANPLDYRLSWLVQQTLVALGYTHLSDHVAALTHTNFATQLEAHGLWHWAIFV
VLHLRDSSRRRAAVQDLLLRHIEIDDTPEYIKHEQFLKEELGISSVWIHQAKAIKSSVNK
RYGEAAWYYIQAEQWTQAHEIIIEHLAADAIINENYEYLKSLLSPLVPIEYSGTISGWSH
QGQLLWEYMEITSEIQSLLKSAPDYRGLTYQLEALKPRLTGLCNKIDQFPCLTAKHRLCQ
AEIAKRTVHLARNMLLLQKNEQRSVTKLLVRLISQLPLPEDYAQQELRPTVNMRVTEIMP
NT seq
5763 nt
NT seq
+upstream
nt +downstream
nt
atgtttgggcaaactggaaatacatcgttcagtggatttagtactgcgacgcaaaacagt
ccatttggccaatctgcatttggcaaacccattactacaacaagttttggtagtggcgca
acacctgtctttggtagtaacaatacttcatcactctttagttctaagcccacaggttct
accacaggtggcttgtttggaaataccacaacgccaccggcatttagacagccaactaat
actcaaccgtcttttggaggcttcgggacaacaaatacaagtaccaatcttttcggcacc
caacaaaatgccgggacaaatcttttcggtacaagcacagggacttcagcgtttggtcaa
gcaaacaaacctggttttaactttggcacaacatccggaactaatctgttcggacaaccg
caacaaaatgcacaacaaactactccatttggtcaggcgaataccaccacaaacacaaat
ctttttggtacaaccacaggttttggcaatactaacccgactaccgtaccagctggcact
gcagtgaaattcacacctgtcattacaactgattccatgtcaaaaaatggaatatcgcac
agcatttcggcccgtcattgttgcattgcatctatgaaagaatatgaatccaagtcttac
gaggaattacgttttgaagattatcaacttgggagaaaaggtccacaaacgggtctcttt
gggacgtcggcacaaacatcaccgttcggtagcacatcagctggtactagcacagctggg
acaggatttggttcaatgaccggaggatttggtaccactagccaatcaggatcgaccgga
ctattcggaaaacccattactaattttggaacgccagcaactacaacaaccaacagcttt
gcattcaattctacacctacaacaaatctgtttggtactaatactcaaacaaaaccattt
ggtacagctgccccgacacctctttttggcactagcagtactaaccagactgctggaacg
ggttttggtagcattaataccggacagaatactggattcggatctgcattcggttccacg
caacctaatcagagtattggattgttcaatcagaacaagtctgcttttaatattccatcg
acgtcgactagtaccggcttcactggctttggtcaaccggccacaaacaccactacgcca
ttattcggtaataaaactaccaccaccggatttggaacaacgtctacattcggtgcggcc
gcgccttctacattcggaactaatacaggttttaattccggcaccaaccctggatcctcg
ttgtttaactcgtcgttcaaaccagctggacaaacatcgggattttctttcggaactaca
cctgcatcttcaactgggcttggcacgaatactggtttaagcttgggcggtgggtcttca
ttgttcggccaacaaaagccgggtagtctatttggaaatacaggaaacaatacgacgttt
aacaatcctggaacatttggatcttctacttttggaacgagttctaacatgatgtctgga
acaggagtgggcttacttaatggaggggcagtatcaaatcaggctaaagcaaatggttcg
gtaccggtgcatcaacaaatcttagctcttgtttccgcaccattcggcgattcaccgtta
ttgaagaatcttttaccagcttctggaaagaccgaagaactcttaaaacctactaatcca
gcatcgaaagtactgaatagtccacaatacagagttactgccaataacaaatctccgaaa
atcaaagcgagagtcgtcagttctgcgcagctatcgaagaaatccttgttcgatggcctt
gaagaagaagatcccgtaataacagaagcttttcaacctcggccaagcgcaaaacgttta
gtattacggccaaagtcagcgacaaattcctcggttcaatctcccatagaaaatggagaa
tctgtgacgagaaatggtactgcagaagacagggcagatacatcaaatgtagtgcacagc
aacaacatcgaagttaatgacaaggaaaatcacagccaagacaataatcgacttgcaaat
gatcgacggtcgtctacatcttggttaaagtcgacgcttccgcagaaaaataagatttcg
gacgatgaattgcttgaggggcagcgatcgcctttttctggaacgaatgtaccggaagaa
gtgaataatacggtggccgaattaagatcgcaaaatagtacatcgagtataaatcattcg
gaaataattaattcgatcgaagtgccactaaattctacttttgacgagaaaaattccgca
aatctcaccatgccgaatgcagaatccggtcaagaaacagacgagagttcgttgttgatg
ctgcaatcaaactggagtgtgaacatggctaaagttacattacgacgagcgggctattac
accattccgtcgctcgataaactagacgattttgtttgcggtgagacgtgcgtcgtgccc
aactttaccatcggccgtgagggttatggcaatgtatacttcccggattcgtttgacgtg
tacggcttgaatctcgatgaaattgtacattttcgtcataaagaggtgattatttatcct
gacgatgagaagaaaccaccagtagggcagggcctgaaccgaagagcacaggtcactctg
gacaaagtgtggccacatgataagtcactgcacgagccgatcacagatccacaacgactt
gccgcgatgaactacgaggggaagttacgtagagtgtccgcaaagcacgacacccgtttc
cttgagtatcgaccggagactggctcgtgggtcttcaaagtcgaccacttttccaagtac
ggtctcagcgattcggatgaggatgacaatcagatcccaccgatttcggaagcaaagaaa
ctgaagggattccccgcgcccgtacaaaagggcaaacctatcgatccatcgacggcgacg
aataaagaggcgatcaatggaatgatgattaacggaacgcttgaaagtatgaagattgga
aacggcaaggagcatccaaatatcgtcgagaacaattttttagggaaaaccccaataagc
cgttttgcctataacgatcacagttataaggaacgaggaatgatcgtcagcccgggcggg
gaaaccccgtttggccgttccggttttgttcccggggattacaattacgaaaaacgcatg
accgtcagtccagtcggcgataacgctcgcgtcaccggcacagacagccacaagttgcag
cttatgaaagcgagcttctttgatgtgaacgacgaagatgtaaacgaggaagctaacaac
ggcatattcccctccgtacagaaaactttgatacgctatttcccagatgtcacagaggcc
aagagcgacgaagctccgtacaacgctacgacattacgaacgactctcgtcgcacacgaa
acgctgttctccacatgttctccggagaacgtgctttctacgtcgagtagaatatcgcat
ttgcctcgtattggcgcgagagacaaacagattatcgagagagctattccaccgcctgta
gtcacaccagtgacaagcgtattgaagtatcactatgaggttgtaccacttgaagagtcc
aggttgaacagattgcgatttcgctgcattgctgacgccggtatatacatgggcaggacg
tttcgcccgagttggggcgccggtctcacactgctgtccctgagcacacaagagcaggca
acgaagatgcaactgcggagcacgttcagtcagctgagtcgttacctctccggccgtctc
gctgacgacatatcgtcgacggtaattgttcaacgcctgcaaatcctcgggggcgacgag
tatgacacgaagacattcaaagacagcatagaacgtcacttgagaattcagctagatcac
tgcgtgatgggccacgagggagactgtcccacgtttgacgtagcgaccgacagcgcaaac
gaggcattgcagctgcattgcacgctggcacaggatctcgcggagcaggaacaaagaccg
agcgaggatgccaatgacgagcagatgcagtgcggcagcgccagcgagaggtcgttccgt
caatatgcgagtatcgtgtggaccttatgtgtggcactctggggaaattacgctgatcag
gacatggccgacaacgccaatgaggaacactacaatgtcatggtgcgaagggaagctgtg
ggcgactggttgaggaacgtggtgcagaagacggttgaacgagagatcaagagcatcgac
ggtgaaactaaaaactcacacgaaaagataatattgtcgctgctctccgcttgcaagctg
gaggacgcttgccaggaagcgcggaaggccggagatcactgcctggcgttactgatggcg
caattacgaagcggcgcgacagtcaagaaattgatcaagcagcagcttgcgctgtggcag
gagaccgatgtggacgaaaatctcacgatcgatcgtctaaagctgttcatgttggtggcc
ggcgaaccgctcatctccagcaaacacggcactatcaatgtatgcgaggacctggactgg
aagcgggccttcgccactcatctgtggtacctgtcgccaccgacttgctccatcaccgac
gccttggacctctacgaaatgtcgtttaatgcgacggaggctcagggatatgcggcagtt
cccgaacccgagtacagggagaacgagtacgatgccgagttgagtaacggcaaacggata
cacgatctttgctttcatcttctgaagttgtactgcacgggaaatcacgatctaggcgag
ctcctcaatccactgtcgtacaccgccaatcccttggattacagattgagttggctagta
caacaaacgcttgtggctttgggttacacacatctctccgatcacgtcgctgcgttgact
catacgaactttgcgactcaattggaagcgcatggactctggcactgggcgatcttcgta
gtgttgcatctacgagattcatctagacgacgagctgccgtacaggacctgctgttgcgt
cacatagagatagacgacactccggaatatataaaacatgaacagtttttgaaggaggag
cttggtatatcatcagtttggattcaccaggctaaggccatcaaaagcagtgtcaataag
aggtatggcgaagcagcttggtactacatccaggcggaacaatggacccaagcccatgaa
attattatagagcatctggcagccgatgctataataaatgaaaactacgaatatttgaaa
tcactgttaagcccgctggtaccgatcgaatatagcggcacaattagcggatggtcgcat
caaggacaactcctgtgggagtacatggagataactagcgagattcagagcctgttaaag
tctgctccggattatcgtggactaacttatcaactggaagcgctgaagcctcgattaaca
ggcttgtgtaataaaatcgatcaatttccatgtctgaccgctaaacacaggttgtgccaa
gctgaaattgcaaagaggactgtacatttggctagaaatatgctgctgttgcagaaaaac
gagcagagatccgtcacgaagttgttggttcgtctgatatctcaactaccattgccggaa
gattatgcgcaacaggaactgcgacctaccgttaatatgcgcgtaacagaaataatgccg
taa
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