Temnothorax longispinosus: 139812140
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Entry
139812140 CDS
T10889
Name
(RefSeq) netrin-1
KO
K06843
netrin 1
Organism
tln Temnothorax longispinosus
Brite
KEGG Orthology (KO) [BR:
tln00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
tln00536
]
139812140
Glycosaminoglycan binding proteins [BR:
tln00536
]
Heparan sulfate / Heparin
Axon guidance molecules
139812140
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_N
NTR
EGF_laminin
EGF_LMN_ATRN
F5_F8_type_C
BNR_6
Motif
Other DBs
NCBI-GeneID:
139812140
NCBI-ProteinID:
XP_071632863
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All DBs
Position
4:complement(16421368..16620036)
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AA seq
743 aa
AA seq
DB search
MAEKRSFRPWVVLATILSGQLLLLLLPLQPARGEIYTKMFSSQQNPSDPCYDEDRPRRCI
PDFVNAAFGATVEASSTCGTGGPTRYCDVTDEPGGTTGIGHCHVCDDSTPRRRFPASYLT
DLNNPNNVTCWRSEPLVSSQSFSAPPDNVTLTLSLGKKYELTYVSLQFCPRAAKPDSIAI
YKSMDYGKTWQPFQFYSSQCRRVYGRPNRATITKANEQEARCTDSHRYTGGDGLGPVGRI
AFSTLEGRPSAADFDNSPVLQDWVTATDIRVVFNRLHMPSGPDQGSSSLNGEEHHVAAIG
LEEMTKREREREERLKSQKNAILHGQDPLVTALPSVHQVIAPQEMQSNDAIDAAVRDMGF
VPVTVSSTTTTLASVAMNGLGPIATATMAHHYAVSDFAVGGRCKCNGHAARCIPGKDGEV
VCECRHNTAGRDCERCRPFHFDRPWARATARDANECKVCNCNLHARKCRFNMELYKLSGR
VSGGVCLQCRHFTAGRHCHYCREGYYRDPARPITHRKACKPCDCHPIGASGKTCNQSSGQ
CPCKDGVTGITCNRCARGYQQSRSHIAPCIKIPRVVQTQGTAGEESGEHEDDDDERGYDG
RADQCGKCRASTKRLNLNKYCKRDYAILGRITDRHKKSDGSQAGTSVSGTSWIRFTLNVD
FVYKKNPNSRLRRGDVSLYVHSADLACRCPKIKPNKSYLILGQESDGSGQGGLTVTQRSI
VIEWRDEWHRRMRRFQRRARSCH
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atggcggagaaacggtccttccggccgtgggtcgtcctcgcgacgatcctgtccgggcag
ctgctgctgctgttgctgccgctgcagccggcccgcggcgagatctacaccaagatgttc
tcgagccagcagaacccgagcgacccgtgctacgacgaggaccggccgcgccggtgcatc
cccgatttcgtgaacgcggcgttcggcgcgaccgtcgaggcgtcgtccacgtgcggcacc
ggcgggcccacccgctactgcgacgtcaccgacgagcccggcggcaccaccggcatcggc
cactgccacgtgtgcgacgacagcacgccccggcgacgcttccccgcgagctatctgacc
gacctgaacaacccgaacaacgtcacctgctggcgcagcgagccgctcgtcagctcgcag
agcttctcggcgccgcccgacaacgtcaccctgaccctctccctcggcaagaagtacgag
cttacgtacgtcagcctgcagttctgcccgcgcgccgccaagcccgattcgatcgcgatc
tacaagtcgatggactacggcaagacctggcagccgtttcagttctactcgtcgcagtgc
cgccgggtctacggcaggccgaatcgcgccaccatcaccaaggcgaacgagcaggaggcc
cggtgcaccgacagtcaccgttacacaggcggcgacggcctcggcccggtcggcaggatc
gccttcagcaccctggagggccgaccgtccgccgccgacttcgacaactcgccggtgctg
caggactgggtgaccgccaccgatatccgggtggtgttcaaccggctgcacatgccgtcg
ggcccggaccagggatcgtcgtcgctcaacggcgaggagcatcacgtggcggcgatcggg
ctggaggagatgacgaagcgggaacgcgagcgcgaggaacgactcaagagccagaagaac
gcgatcctgcacggccaggatcccctggtgacggccctgccgtcggtccatcaggtgatc
gcgccccaagagatgcagtccaacgacgcgatcgacgccgcggtacgcgacatgggcttc
gtgccggtcaccgtctcctcgaccacgaccacgctcgccagcgtggcgatgaacggcctg
ggcccgatcgccaccgccaccatggcccaccactacgcggtctcggacttcgccgtgggc
ggcaggtgcaagtgcaacggacacgcggcgcgctgcatccccggcaaggacggcgaggtc
gtctgcgagtgcaggcacaacaccgccggcagggactgcgagcgatgccggcccttccac
ttcgaccggccgtgggccagggccaccgccagggacgccaacgagtgcaaagtgtgcaac
tgcaacctccacgcgagaaagtgcagattcaacatggagctgtacaagctgtcgggccgt
gtcagcggaggcgtttgtctgcagtgccggcattttacggcaggaaggcactgtcattac
tgccgcgaaggttactacagggacccggcgagaccgatcacgcatcgcaaggcctgcaaa
ccatgtgactgtcatccgatcggagcttctggaaagacctgtaaccagagcagcggccag
tgtccctgcaaagacggcgtaaccggtattacttgcaacagatgcgccagaggctaccaa
cagagcagatcgcatattgcgccttgcatcaagatacccagggtcgtgcagacgcagggc
acggctggcgaggagagcggcgagcacgaggatgacgacgacgagcgcggatacgatgga
cgagctgatcagtgcggaaaatgtcgcgccagcacgaagaggctaaatctcaacaagtac
tgcaaaagagactatgctattctgggcagaataacggacagacacaagaaaagcgacggc
tcccaggccggcacgagcgtatcaggcacatcctggatccgattcactctaaacgtcgac
ttcgtttacaagaaaaatcctaactcgaggcttcgccgtggcgacgtatctctttacgtt
cactcagctgatctagcttgcagatgccccaaaattaaacctaacaaatcgtacttgatc
cttggccaagagagtgacggcagtggccaaggtgggctcacggtgacacagaggtcgatc
gtcatcgagtggcgcgacgaatggcaccgtcgaatgcgccgtttccaacgaagggcgaga
tcgtgccattga
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