Temnothorax longispinosus: 139812233
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Entry
139812233 CDS
T10889
Symbol
Mbo
Name
(RefSeq) nuclear pore complex protein Nup88
KO
K14318
nuclear pore complex protein Nup88
Organism
tln Temnothorax longispinosus
Pathway
tln03013
Nucleocytoplasmic transport
Brite
Messenger RNA biogenesis [BR:
tln03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
139812233 (Mbo)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup88
Motif
Other DBs
NCBI-GeneID:
139812233
NCBI-ProteinID:
XP_071633018
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All DBs
Position
4:20227341..20291999
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AA seq
705 aa
AA seq
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MSSCTDLLRLNEKGLFKDIKVSLSSGAKETRNILEIRDNVLYVWNADRCCVLTLNVAATR
GKLGEDIPYQTLQPTDPPIFEVTNVLINETATQLALWGKLGIALMELPKRWGKDAVYEGG
KEEILCTNHNFGDFEATTEIQQARWHPGSTNDSHLLVLTSENSFRLYECELGGAPRLIKC
WKVGRAPSSSPSKIPDFTSLGETAVDFDFATPTLRKPELFANDEIKEVMNWNQIEWPILV
LRGNGEVLIVRGNVLLENYENPVVLGSLSMYPSTDDNYGIDSCSIMCLQTTPPIVVIAMC
TGKIYHAILLREISDYDDDDRKTWSQYGSSYSLHTPDDALYVYECVELELGLLFTDDDKK
YNCPIHLHCDKGNKSRYFCSHNAGIHMVSLPMVSQLDEFIHDNSGNYLPSLLNQSILQYL
FSTRTKHTNVDEPTPIFGFGLLQEPCILVALLHTGVVIDLSVIDLYYLPRIEQLEPVIDT
TKKVNKEPFDVYIKKLLRREISQPITKIGSRSMSLSESLELLYHATNIFRTQHFVRHDKV
REEISKKVRALKALKSHLLKELDALIETKKELRQTAERLAERYEDINDKQKELARRAEEV
LRLVNYKEPSMTPIERAEAEELKKMDVKIYDMQIRLEQLKKKSAQQTIHTNGIETNGKKK
EIVFTRSQEEATKENLSQTAKNIKNLVDQVKQIKAEISLSYISKQ
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgtgcacggacttgttgcgcctgaacgagaagggcctgttcaaggatatcaag
gtgagcctgtcgagcggcgccaaggagacgcggaacatcctcgagattcgcgacaacgtg
ctgtacgtgtggaacgccgacaggtgttgcgtgctcacgctcaacgtcgcggcgacccgc
ggcaagctcggcgaggacatcccttatcagaccctacaaccaacagatccgccgatattt
gaggtcacaaacgtactgataaacgagacagcaacgcaactggcactatggggcaagtta
ggcatcgctctcatggaattgccgaaacgatggggcaaggatgccgtttacgaaggcggc
aaagaagagattctttgcacgaatcataatttcggcgacttcgaagcaaccacggagatt
caacaagcgcgatggcatccgggttctactaacgactctcatctattggttttgacatct
gaaaactcttttcgtttatacgagtgtgaactgggcggtgcaccaagactcataaaatgc
tggaaggtcggccgcgcgccatcgagctcaccctcgaagatcccggactttacgtccctc
ggcgagaccgcggtggacttcgatttcgccactcctaccctgaggaaaccggaattgttc
gcaaacgacgagataaaggaagtgatgaactggaatcagatcgagtggccgatcttggtg
ctccgtggaaatggcgaagtactaatcgttcgtgggaacgttttattggagaactatgag
aatccagtggtattgggctcgctgtccatgtatccgtcgaccgacgataattacgggata
gattcgtgctctatcatgtgcctgcaaactaccccgccgatagtggtcatcgccatgtgc
accggaaagatttatcacgcgatactgctgcgcgaaatatcggactacgacgatgacgac
agaaagacttggtcgcaatatggttcgagctatagtcttcatacgccagacgatgcgctt
tatgtctacgagtgcgtcgaactggaactgggtcttctctttacggatgacgataagaaa
tataattgtcccatccaccttcactgcgacaagggtaacaaatcgagatatttttgctct
cacaatgctgggattcacatggtgagtctaccgatggtttctcaactggatgagtttata
catgataacagcggaaattatctaccatctttgttaaaccaatcaattttacaatattta
ttctctacgagaaccaagcatacgaacgtagatgaacctacgccgatattcggttttggc
cttcttcaagaaccttgtattttagtcgcattactgcacacaggcgttgtcatcgacctc
tcggttatagatctttattatcttccaaggatcgaacaattagaacctgttattgacact
acaaagaaggtgaataaggaaccattcgacgtatacatcaagaaattactaagacgcgaa
atatcacaaccgataactaaaataggatctcgctcgatgtccttaagcgaatccctagag
ttgttgtatcacgccacaaacatctttcgtactcaacatttcgtccgacacgacaaagtt
cgggaagaaatcagtaagaaagtccgtgctctgaaggctttgaaaagtcatttattaaag
gaactcgacgctttaatagagacgaagaaagaattgcgacagaccgctgaacgtttagct
gaacgatatgaagatattaatgataaacagaaagaattggcacgtagagcagaggaagtt
ttaagattggtaaattacaaagaaccttcgatgacgcctattgagcgagcagaggcggaa
gaattgaagaaaatggacgtgaagatatacgacatgcagatccgacttgaacagctcaag
aaaaaatccgctcaacagactatccatacaaatggtattgaaactaatgggaagaagaaa
gaaattgttttcacacgcagccaagaggaagcgacaaaggaaaatcttagtcagacggcg
aaaaatataaagaatttggtagatcaggtaaaacagattaaagcagaaattagtctttca
tatattagcaaacagtaa
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