Temnothorax longispinosus: 139812468
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Entry
139812468 CDS
T10889
Symbol
Nfrkb
Name
(RefSeq) nuclear factor related to kappa-B-binding protein isoform X1
KO
K11671
nuclear factor related to kappa-B-binding protein
Organism
tln Temnothorax longispinosus
Pathway
tln03082
ATP-dependent chromatin remodeling
Brite
Chromosome and associated proteins [BR:
tln03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
139812468 (Nfrkb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139812468
NCBI-ProteinID:
XP_071633416
LinkDB
All DBs
Position
4:complement(5771738..5783702)
Genome browser
AA seq
1542 aa
AA seq
DB search
MEIDECSAGGDSGAEEDEEEASTHDSRTDSSSSSSMSGSSTTTDSEQDSAEDHATSSSES
HSSAEEDEDENENAEYMVNIENPDALRWETCVAANIKVKLPQDLCEHFSIFKEMLDYPRF
WNEWLTESQRETLYNLLPTFPKDSNIEAQMEKSLQMLFNRENNRFGVMPLDTFHNHLSSG
HYRPDIKRIRGLVRKAQKRRLLFEERKRSYELANQLLKSRESLLSNAYRQGFNQPVNRSM
SKLHWRKSKPIMVEEKTQLRYLEELNAVLAELRTSTRLSADTTSENEENYPYYQTTGAKQ
KKKRRFTMSLQGLSVKGLQLNHEDDTIRPVFSTLQRMEYASNRSLFVREQTEETYRAMLI
AHKKRRARRDLHPELNTQGIALADLTQRSQIGQKQKLTISNSMKITSSKKKIKLEQNSLC
PPAPKLANSNFVKHESDNSDYSHTTDDNRQSNVVDVDYNRITTPIKSEPVETYEAHQVAK
KKISPVTQKSSKPAVANIPEIKKEVEDTEYDKVKTELSLSVNEDVLAETEEEEENESKKE
LDLDSIDMMQLPIQLDDGIDILDDVKCEDERVISIPETKMTMPTNEGIDVNNGAELMQET
HTCFFSLLRDAFTSKGEYRMSAAEMKEAIMQWQGNPISPLNDWYSLVPSWPTLVPLALGF
LAGELMYSQDLDQRQERDQELVPYLENKGRGVYAWIGAGRDSDTRLQDLCTKFLMYKDVL
TSPYTPTTSAVTATKSQQSQISSSNNSTTNNSIVTSGILQSGRSGSPALESTNVDASATG
TDWEPPRPLFPTEWKVRPSTVEEREEFRRQERMRYAAPHKAFTYRMHGYASVVGPVKGIY
QHNVASGQAKARGHSLLVPDRPNFVTILALVRDATARLPNGEGTRADICQLLKDSQYIIE
QDNDEKEGYLHSVVSGALDRLHYETDPCVRYYPRRKEWLYLHRGRSESEFEMVHQQLQGI
AKNKKSVGNTSRNKVVQPILKSANVNKEQSSNTKEVILKKERRMTTIPMQPVIPKKEQRK
IEEKIVTDHSIPTEHSVNANVEMGVNTITSAISTVETPVSVASIVTSSATITNVVSTERD
NIAIDTKSSLAPIMVKKASTVGGKPIAVLKTNAAQSLLQSNQHNFPHHQIQVSTSAGLQT
IRLSGHSVLQSAQQSVSTSNNSNVVNGATTNLTTILPSTKAQNQPPQQSAIVTNQAGKSI
LQTTNMKQQQSQQQQQQHVLPGKTLLASQIKLVSSSQIKSLLTSHGLQGQTIFIKQSSPS
NNQSQQQQLQQQQQQQQQQQQQQQLKQQQLQQQRVTANQQQPIQQTPGMQRIIAQIGGKP
IAVQIQQSPHHQQQQQQQKILAKVLTNSSGGQIISVESLLAQKGLKLATTTGHANQLNRQ
GKQIIQAQYQVVPQAQASSSQSKIIAVSTQHQQSQPQQAQTVRMVTAQLAGKPIVLASSN
KNVGVAVSTSGGNVVLGKQPASQQQQQQQQTQQPIILPSQLLNIKTLHGLKVIPTPTGLK
TASGAVYARVIAPTTMASTQATSNQQQTLQTQSPRNTSYGTP
NT seq
4629 nt
NT seq
+upstream
nt +downstream
nt
atggagatagatgaatgctcggccggtggtgatagtggagccgaggaagatgaagaagaa
gcttcaacgcatgattctagaactgatagtagtagtagtagtagtatgagtggcagtagt
acaacgacagacagtgagcaagatagtgcggaagatcatgccacaagcagcagcgaaagc
catagttctgcggaggaggacgaagatgaaaatgaaaatgcggaatatatggtaaacatc
gagaaccccgatgctttgagatgggaaacctgcgtcgctgccaatattaaagtaaaatta
ccccaggatctttgtgaacactttagtatatttaaagagatgctagattacccacgtttc
tggaacgaatggcttaccgaaagtcaacgagaaacgttatacaatcttttgcctactttt
ccaaaagactccaatatagaggcacaaatggagaaatcgttgcaaatgttgtttaataga
gaaaacaacagatttggtgtaatgcctttggacacgtttcataatcatctttcctccggt
cactatcgtcctgatatcaaaagaatacgcggtttggttcgcaaagcgcagaaaagaaga
ttgttgttcgaggagcggaaacgatcatacgaattggcgaatcagctactaaaatcacgg
gaaagtttattatcaaatgcgtataggcaaggtttcaatcaaccagtaaaccgatcgatg
tctaaacttcattggcgcaaatcaaaaccaataatggttgaagaaaagactcagttgcgt
tatttggaggagctaaacgcagttctggcggaactcaggaccagcacgagactgtccgcc
gatacgacgtccgaaaacgaagagaattatccttattatcaaacgactggcgctaagcag
aagaaaaaacggcgttttaccatgagtcttcaaggattgtcggttaaaggcctacaactc
aatcatgaggacgatacaattagacctgtattttctaccttgcagcgaatggagtacgct
tctaatagatcgttgtttgtacgcgaacaaacggaggagacctatcgtgctatgttgatc
gcgcataaaaaacgacgtgcccgtcgtgatcttcatccggagctgaacactcaaggaatt
gcgctcgccgatctcacacaaagatcgcaaattggtcaaaaacagaaacttacaattagc
aactctatgaagatcacgtcttctaaaaagaaaatcaaattggaacaaaactcgttgtgt
ccgcccgcgccgaaactggcaaactccaatttcgtgaaacatgaaagtgacaacagcgat
tactcccatacgacggacgacaacagacaatctaatgtcgtggatgtagattataataga
ataacaacgcctatcaagtcggaacccgttgagacatacgaagcacatcaagtagctaaa
aagaaaatcagcccagtaactcaaaagagtagcaaaccagcagtggccaatataccagag
ataaaaaaggaagtcgaagacacggaatatgacaaagttaagaccgaattaagtttgagc
gtgaacgaggatgtgctggctgaaaccgaggaagaagaggaaaatgaatctaagaaagag
cttgatttagacagtattgacatgatgcaattaccgatccaacttgacgatgggattgat
atactcgacgatgttaagtgcgaagatgagagagttatatcgatacctgagacgaaaatg
actatgccaaccaatgaaggtatagatgttaacaacggggcggaattaatgcaagagacc
cacacatgcttcttctctctactacgggacgcttttacttcgaagggagagtaccgaatg
agcgcagcagaaatgaaggaagcaataatgcaatggcaaggcaatcctatttcgcctttg
aacgactggtattctctggtaccttcgtggcctactttagtaccgttagctctgggattt
ctcgcaggcgaattgatgtattctcaagatttggatcagcgacaggaacgagatcaggaa
cttgtgccctatttggaaaataagggtcgaggtgtatatgcgtggatcggcgctggaaga
gactccgatacccgattgcaggacttgtgtacaaaattcctcatgtacaaagacgtattg
acgtcaccgtacactccgacaactagtgctgtaacagctacaaaatcgcagcagtctcaa
atctcctcgagtaataacagcacgactaataattcgatcgttacaagcggaattttgcaa
agtggcagaagcggaagtccagcactagaatctactaatgtggacgctagtgccactgga
acagactgggaaccacctcgaccgctatttcccacagaatggaaggtccgtccgtctaca
gtagaagaacgcgaagaatttcgaagacaagagcgtatgcgttacgctgcgcctcataaa
gcgtttacttatcgcatgcacggttacgcgtccgtagtcggccccgtcaaaggaatttat
cagcataatgttgcttcaggacaagccaaagcccgaggacattcgttgttggtaccggat
cgtccgaacttcgtaacaattttagcgttagttagagatgctactgcccgacttcctaat
ggtgaaggaactcgtgctgatatttgtcagttattgaaagattcgcagtacatcatagag
caagacaatgacgagaaggaaggatatctccattctgtagtatcaggagcgttggataga
ttacattacgagacagatccctgtgttagatattatcctcgtcgaaaggagtggctttat
cttcatcgaggacgatctgaatctgaatttgaaatggttcaccaacaattacaaggtatt
gcgaaaaataagaaaagcgttggcaatacgtcgcgaaataaagtggtgcaaccaattctc
aaatcagctaatgtaaataaagaacaatcttcgaataccaaagaagttattctcaagaaa
gaaaggcgaatgacaactatacctatgcaacctgttattcctaagaaagagcagcgtaaa
attgaagaaaaaattgtcactgaccattctatccccactgaacattccgttaatgctaat
gtagaaatgggagttaacacaataacatcagcaatttctaccgttgaaactcccgtttct
gttgcatcgatcgtgacttcttcggctacgattacaaatgtagtgagcacagaacgagat
aacattgcaatagatacgaaatcgtcactcgctccaataatggtgaaaaaggcatctact
gtaggaggaaaaccaatcgctgtactcaagacaaacgctgctcaaagtctattgcaatca
aatcaacacaattttccacatcaccaaattcaagtatcgacgtctgctggcctgcagacc
attcgtctgtccggacattctgtattgcaatctgcacaacaatctgtttcaactagtaat
aattcaaacgtggtaaacggagctacaacaaatttaacgacgatattaccgtctacaaaa
gcgcaaaatcagccaccgcagcagtcagctatagtaacaaatcaagcagggaaaagtatt
ttacaaactactaatatgaaacaacaacaatcgcagcagcaacaacagcaacatgtgtta
ccaggcaaaactctcttggcatcacagattaaattagttagctcgagtcaaattaaatcg
ttgctcacaagccacggtcttcagggtcaaactatatttatcaaacaatcctcaccgtcg
aataatcaatcgcaacagcaacaattacaacagcaacaacaacaacaacaacaacagcaa
caacaacagcaactgaagcagcaacaactccaacaacaacgagttacggctaatcaacaa
cagcctatacaacaaactccgggaatgcaacgcataattgcacaaatcggaggaaaaccg
attgccgtgcagatacaacaatcgcctcatcatcaacagcagcaacagcaacaaaagata
cttgcgaaagttttaacgaacagcagcgggggacagattatttctgtcgaaagtttgcta
gcgcagaaaggattgaaattggctactactactggccatgctaatcagcttaataggcaa
ggcaagcagatcatacaggctcaataccaagtagtgccgcaagcgcaagcatcttctagt
caatcaaagataatagcagtcagcacgcaacaccagcaatctcagccgcaacaggctcag
actgtccggatggttaccgctcagctcgcgggaaaacctattgtgttagcgagcagtaac
aaaaacgttggagttgcagtgagcaccagtggcggaaacgtagtattaggcaagcagcca
gcctctcagcagcagcagcagcagcaacaaacgcagcaaccgattatcttgccgagtcag
ctactcaacatcaaaacattacacgggcttaaagtaattcccacgccaaccggattaaaa
accgcaagtggtgccgtgtacgctcgagttattgctcctacaacgatggcttccacgcag
gctacatcgaatcaacagcagactcttcaaacgcaatcaccgagaaatacctcgtacggc
acaccttga
DBGET
integrated database retrieval system
