Temnothorax longispinosus: 139812512
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Entry
139812512 CDS
T10889
Name
(RefSeq) contactin
KO
K06761
contactin 3/4/5/6
Organism
tln Temnothorax longispinosus
Brite
KEGG Orthology (KO) [BR:
tln00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tln04515
]
139812512
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
tln00537
]
139812512
Cell adhesion molecules [BR:
tln04515
]
Immunoglobulin superfamily
Contactins
139812512
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
tln00537
]
Others
139812512
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
fn3
ig
V-set
Pur_ac_phosph_N
Ig_DSCAM-DSCAML_C
UL45
Lectin_C
Fn3_VIN3
Motif
Other DBs
NCBI-GeneID:
139812512
NCBI-ProteinID:
XP_071633459
LinkDB
All DBs
Position
1:17245634..17252233
Genome browser
AA seq
1232 aa
AA seq
DB search
MFGMMSRLLIIAVFSLNLSLPTFAQNILYGEQAFAPLQCPQHWVRFQESCYRFIKSPLRP
REDARRNCQAFQSDLLAINSMEEHGFVLYQLLWQDPQHRRWYTGMKLQSGLWINEADSTT
LINMDNAFLPEPNDNVLGRDYLAYSYSNNLQRWGLEKVTGREELLYICEAPIVTLHNLVD
DDRTYQYGIDIDNPLQIPRGPYFIKQPMSKVFDVSKRRISNDVSLSCLAGGYPTPTYEWF
KEDYENDRLVATKINPLSNSRYTVSGGTLIIYEPEQTKDRGSYHCKATNKFGTIISESVE
LSFGYILEFNLKRSEERGDNHWGKAVYCDPPQHFPGVKYYWARDYFPNFVEEDKRVFVSH
DGALYFSALETIDRGNYSCNVQSVASDTGRNGPFFPLRVDMHSSFQQLKFPNNFPKAFPE
APVAGEEVRLECIAFGYPVPSYNWTRRGSVLPRGSYTSSYNRVLIIPHVRVEDQGEYVCR
VHNDRLSIENSVQLTIQAAPNFTIPLVDKHMDNRADLTWTCEAFGIPDVTYSWFRNGELL
DMYTLPPEDRDRYTIQDNVLNIRHLEPERDQAMYQCRAKNQLKTTYSSAQLRVLSLKPSF
KKRPMESETYAAEGGNVTIVCKPEAAPRPKFVWKKDGNVIGSGGRRRILETGNLIISPVS
RDDEGTYVCTATNQYGSDETRGRLIVLRGPQFIQRLPPLILLSYNSNLTLRCVAQTDEML
DVAYIWTHNGMRIRNKDLQNNPRLRIGGEYLDIINATFTEAGEYECILRSAVGEISSKLN
LIVQGPPGPPGGVQVVNIVKTSATLRWTDGALNGKQITMYTISARTNWNRTWFPLVENIT
AVEMDRYNGRKEAYLENVLDPYSTYEFRVLAFNEFGYGPPSTPSPQYSTPSDKPMKTPSN
ISGGGGKIGDLTITWDPLSPSDQNGPGIYYKIFWRRKGYDTEFQSLSLKEYGNVGSSVVS
IQPKYYYTEYEVRVQAINAMGEGPISEIVTVYSAEDMPQVAPQQVYALSYNSTSLNVSWL
PIEQTRERVRGKLIGHRIKYWKESNREEDATYYLSRTTRPWSLVVGLQPDTYYYVKVMAY
NSAGEGPESERYLERTYRKAPQKPPSSVNVYGVNPSTVRVVWRYVQPSLEEEPLIGYKIR
VWEVDQDMSTANDTIIPGGSKLEADITNLSPGKAYHLRVLAFSNGGDGRMSSPTHTFQMG
DAAAFRSSAGNKVLDTALGIALLMLLQIYDYV
NT seq
3699 nt
NT seq
+upstream
nt +downstream
nt
atgttcggaatgatgtcacgtttattaatcatcgcggtgttttcgctaaacctctcgctt
cccacgtttgcacaaaacattctatatggggaacaagcctttgcgcctctgcagtgcccc
cagcattgggtacgattccaagaatcgtgttatcgttttatcaagagcccgttgagaccg
cgggaggatgcgcgcagaaattgccaagcgttccaaagcgatctgctcgctattaattca
atggaggagcacggctttgtgctctatcaattgttgtggcaggatccgcaacaccgcaga
tggtataccggaatgaagctccagagcggcctgtggataaacgaggctgacagtacgact
ttgataaacatggacaacgcctttctgcccgagcctaatgacaatgtactgggaagggat
tacttagcgtattcttactccaataatctccagcgttggggactggagaaagtcactggc
agagaagagctgttgtacatctgcgaagcgcctattgtcactcttcacaacttggtggac
gatgatcgtacttatcaatatggaattgacattgacaatccccttcaaataccgagagga
ccatattttataaagcagcctatgagcaaggtatttgacgtgtcgaaaaggagaataagc
aacgatgtctcgctgagctgtttggcgggaggctatcctactcctacttacgaatggttt
aaggaggattatgaaaacgatcgacttgtcgcaacaaaaataaatcctctttcaaatagc
agatataccgtgagcggtggaacattaataatttacgaaccagaacaaacaaaagatcgt
ggttcgtatcattgcaaagcaaccaacaaatttggcacaattatctccgagagcgttgaa
ctgtcgtttggatacatcttggagtttaatttaaaacgttccgaggaacgcggagataac
cactggggtaaagcagtttactgcgatcccccacagcattttccaggtgttaaatattat
tgggcgcgcgactacttccccaatttcgttgaagaggataaacgtgtatttgtctcgcac
gatggagcactttacttctccgcattggaaacaatcgatcgaggcaactattcgtgcaat
gttcaaagcgttgcatccgataccggacgtaacgggccgttctttccgttaagggtggat
atgcactcctccttccaacagttgaaatttcctaataattttccaaaagcgttcccggaa
gcaccagtagccggagaagaagttcgtctggaatgcatcgcattcggataccctgttccc
tcgtacaattggacgagaagaggttccgttttgccacgtggatcatacacgtcaagttac
aatcgagtattgataataccacatgtacgcgtggaggatcaaggcgaatatgtttgccgc
gtgcataacgacagattatctatcgaaaattccgtgcaactgaccatacaagcggcgcct
aatttcaccattcctttagtcgacaagcacatggataaccgagcggatttaacttggacc
tgtgaagcattcggcataccagacgtcacttacagttggtttagaaacggagaactcttg
gacatgtatactctaccgcctgaagatagggatcgttatactatacaagataatgtatta
aatatacgacatttggaacctgaaagggatcaggctatgtatcaatgccgcgcgaagaat
caattgaaaacgacgtactcatcggctcaacttagggtcttgtcgttgaaaccttccttc
aagaaacggcctatggaatccgagacatatgcagcagaaggaggtaacgtcacaattgta
tgcaaacctgaagctgcgcccaggccgaaatttgtttggaagaaagatgggaacgtgatt
ggatccggtggcagacgaagaattctagaaactggaaatcttattatcagtccagtatcg
cgagacgacgaaggaacatatgtgtgcacagcgacaaatcagtacggcagcgatgaaact
cgcggacgactgatcgtactacgtggaccacaatttattcaaagactgccgccactgata
cttctgagctataattctaatctgacattgcgctgtgtggcccaaacagacgaaatgttg
gacgtagcgtatatttggacgcataatggtatgcgtatccgtaataaggacttacagaat
aatccacgattacgtatcggtggcgaatatctggatattataaatgccacattcactgaa
gccggcgagtacgaatgtatcttgagaagcgctgttggcgaaatatcaagcaagcttaat
ctgatcgtgcagggaccaccaggaccaccaggtggagtgcaagttgtaaatatcgtcaaa
acttctgccacattacggtggaccgacggtgccttgaacggcaaacagataactatgtac
acaatcagcgcgcgaacaaattggaatcgcacatggtttcctcttgtagaaaatattacg
gctgtcgagatggatagatataacggtcgaaaagaggcatacctagagaacgttttagat
ccgtattcaacgtacgagttccgcgtgcttgcctttaatgaattcggttacggcccgcca
tcaactccctcacctcaatacagcactccgtccgacaaacctatgaaaacaccgtcgaat
atcagcggtggcggaggaaaaatcggggatctcacaattacatgggatcctctcagtccg
tccgatcagaacggccctggaatctattacaagatattctggcgtcgcaaaggatacgac
acggagtttcagtcgttgtctttgaaggaatacggcaatgtcggtagcagtgtcgtatcg
atccagccgaagtattattacacggaatacgaagtgagagtacaagcgattaatgcaatg
ggcgaagggccgatatctgaaattgtgacggtgtacagcgcggaggacatgccgcaggtt
gcgccgcaacaagtgtacgccttgagctataacagcaccagcttaaacgtcagctggcta
ccgatcgagcagactcgcgagcgagtgcgaggcaaattgatcggtcacaggattaagtac
tggaaagagagtaatcgcgaggaggatgctacttattacttgtcgcgtaccactcgtcct
tggtcactggtcgttggattgcagccagatacatattattacgtaaaggtaatggcctat
aactccgccggagaaggtccggagagcgaacggtatctagagcgaacttatcgcaaggcg
ccgcagaaaccaccatcatcggtgaacgtatacggtgtaaacccatcaacggtgagggtt
gtctggcgttatgtgcaaccgagcctggaggaagagccgctgatcggatacaagatacgt
gtgtgggaggttgatcaagacatgagtacggcaaacgacacgatcataccgggtggttct
aagctagaggctgacatcacgaacttgagcccaggcaaagcgtaccatctgagagtgctc
gcattcagcaacggcggcgatggccggatgtcgagtcctacccatacattccaaatgggc
gacgccgcagctttcaggagtagcgctgggaacaaggtcttggacaccgctctggggata
gctctcttgatgctcttacaaatctacgactatgtatag
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