Temnothorax longispinosus: 139812654
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Entry
139812654 CDS
T10889
Name
(RefSeq) nucleoporin Nup43-like
KO
K14305
nuclear pore complex protein Nup43
Organism
tln Temnothorax longispinosus
Pathway
tln03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tln00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
139812654
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tln03019
]
139812654
03036 Chromosome and associated proteins [BR:
tln03036
]
139812654
Messenger RNA biogenesis [BR:
tln03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
139812654
Chromosome and associated proteins [BR:
tln03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
139812654
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WDR55
WD40_Prp19
Beta-prop_EIPR1
Beta-prop_EML
WD40_CDC20-Fz
Beta-prop_WDR5
Beta-prop_WDR36-Utp21_1st
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_WDR75_1st
Beta-prop_HPS5
Beta-prop_pof12
Beta-prop_DCAF4
WD40_MABP1-WDR62_1st
Beta-prop_SPT8
Beta-prop_BBS7
CPSF_A
Motif
Other DBs
NCBI-GeneID:
139812654
NCBI-ProteinID:
XP_071633754
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Position
5:22892101..22894029
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AA seq
345 aa
AA seq
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MGENVQGTFVSEKISKIRWQHGNFTEAKNFLTGSWDNPINKITYWTFRTNYDEEPYPAVL
SSYSFLGDVTELKFISKDFFVAASSLGSIRLLQIDEDTCTEFKEHMAWEFIHSFKTTDYA
SCTALSTFEQDIASVGEDGKLNLLTAAEKKPVRIIENADSCSIYCADFLKHNEVLTGNSR
GHMKVWDLRNDRDVPATTFMLSDQVKTAATSITHHPTQRHIVIAGGDDGSLTVWDLRQNT
YPMSQLNAHTKAVSEILFHQDRPDNLFTCSVNGELWHWNNAQSSKLKLDSTDMHWLNTIS
TNGKVNVTSLCAAMHKPINSIDINRSTLLFGCDNEAMYIVKNVLI
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgggcgagaatgtacaagggacgtttgtatccgagaaaatttccaaaataaggtggcag
catggaaattttacggaagcgaaaaattttttaaccggcagttgggataacccgataaat
aaaataacatattggacatttagaacgaattacgatgaggaaccataccctgcagtcctg
tcgtcgtactcattccttggtgatgtaactgaactgaagtttatcagcaaagatttcttt
gtcgccgcctcgtctttaggctcgataagactactgcaaattgatgaggatacctgtact
gaatttaaggagcacatggcatgggagtttatacatagttttaaaacaacggattatgcc
tcttgtaccgcgttgtccacctttgaacaagatatagcttcagtgggagaggacggaaag
cttaatcttctcacggctgcagagaagaaaccagttaggattatcgaaaatgctgatagc
tgctccatatattgcgccgatttcttaaaacacaatgaggtgcttaccggaaattcgaga
ggacatatgaaagtttgggacttgagaaacgatcgcgatgtgcctgcaactacttttatg
ctttccgatcaagttaaaacagcagctacgagtattacgcaccatcctacgcaaagacat
atcgtgatcgccggcggagacgacggcagtttaaccgtgtgggatttaaggcagaatact
tatccaatgtctcaacttaatgcacacaccaaagctgtcagcgagatactattccatcag
gacagacccgacaatcttttcacctgttccgtcaacggagaattgtggcattggaacaat
gcacagagttcaaaactgaaactcgattctacggacatgcattggttgaatacaattagt
acaaatggaaaagttaacgtgacttcattgtgcgccgctatgcacaaaccgataaacagt
atcgacattaacagatcgacgctgctgtttggatgtgacaatgaagctatgtatattgta
aaaaatgtacttatttaa
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