KEGG   Temnothorax longispinosus: 139812654
Entry
139812654         CDS       T10889                                 
Name
(RefSeq) nucleoporin Nup43-like
  KO
K14305  nuclear pore complex protein Nup43
Organism
tln  Temnothorax longispinosus
Pathway
tln03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:tln00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    139812654
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tln03019]
    139812654
   03036 Chromosome and associated proteins [BR:tln03036]
    139812654
Messenger RNA biogenesis [BR:tln03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     139812654
Chromosome and associated proteins [BR:tln03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    139812654
SSDB
Motif
Pfam: WDR55 WD40_Prp19 Beta-prop_EIPR1 Beta-prop_EML WD40_CDC20-Fz Beta-prop_WDR5 Beta-prop_WDR36-Utp21_1st Beta-prop_THOC3 Beta-prop_WDR3_1st WD40 Beta-prop_WDR3_2nd WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_RIG_2nd Beta-prop_TEP1_2nd EIF3I Beta-prop_WDR75_1st Beta-prop_HPS5 Beta-prop_pof12 Beta-prop_DCAF4 WD40_MABP1-WDR62_1st Beta-prop_SPT8 Beta-prop_BBS7 CPSF_A
Other DBs
NCBI-GeneID: 139812654
NCBI-ProteinID: XP_071633754
LinkDB
Position
5:22892101..22894029
AA seq 345 aa
MGENVQGTFVSEKISKIRWQHGNFTEAKNFLTGSWDNPINKITYWTFRTNYDEEPYPAVL
SSYSFLGDVTELKFISKDFFVAASSLGSIRLLQIDEDTCTEFKEHMAWEFIHSFKTTDYA
SCTALSTFEQDIASVGEDGKLNLLTAAEKKPVRIIENADSCSIYCADFLKHNEVLTGNSR
GHMKVWDLRNDRDVPATTFMLSDQVKTAATSITHHPTQRHIVIAGGDDGSLTVWDLRQNT
YPMSQLNAHTKAVSEILFHQDRPDNLFTCSVNGELWHWNNAQSSKLKLDSTDMHWLNTIS
TNGKVNVTSLCAAMHKPINSIDINRSTLLFGCDNEAMYIVKNVLI
NT seq 1038 nt   +upstreamnt  +downstreamnt
atgggcgagaatgtacaagggacgtttgtatccgagaaaatttccaaaataaggtggcag
catggaaattttacggaagcgaaaaattttttaaccggcagttgggataacccgataaat
aaaataacatattggacatttagaacgaattacgatgaggaaccataccctgcagtcctg
tcgtcgtactcattccttggtgatgtaactgaactgaagtttatcagcaaagatttcttt
gtcgccgcctcgtctttaggctcgataagactactgcaaattgatgaggatacctgtact
gaatttaaggagcacatggcatgggagtttatacatagttttaaaacaacggattatgcc
tcttgtaccgcgttgtccacctttgaacaagatatagcttcagtgggagaggacggaaag
cttaatcttctcacggctgcagagaagaaaccagttaggattatcgaaaatgctgatagc
tgctccatatattgcgccgatttcttaaaacacaatgaggtgcttaccggaaattcgaga
ggacatatgaaagtttgggacttgagaaacgatcgcgatgtgcctgcaactacttttatg
ctttccgatcaagttaaaacagcagctacgagtattacgcaccatcctacgcaaagacat
atcgtgatcgccggcggagacgacggcagtttaaccgtgtgggatttaaggcagaatact
tatccaatgtctcaacttaatgcacacaccaaagctgtcagcgagatactattccatcag
gacagacccgacaatcttttcacctgttccgtcaacggagaattgtggcattggaacaat
gcacagagttcaaaactgaaactcgattctacggacatgcattggttgaatacaattagt
acaaatggaaaagttaacgtgacttcattgtgcgccgctatgcacaaaccgataaacagt
atcgacattaacagatcgacgctgctgtttggatgtgacaatgaagctatgtatattgta
aaaaatgtacttatttaa

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