Temnothorax longispinosus: 139812679
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Entry
139812679 CDS
T10889
Name
(RefSeq) DDB1- and CUL4-associated factor 10 homolog
KO
K11802
DDB1- and CUL4-associated factor 10
Organism
tln Temnothorax longispinosus
Brite
KEGG Orthology (KO) [BR:
tln00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tln04121
]
139812679
Ubiquitin system [BR:
tln04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
139812679
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WDR55
WD40
WD40_WDHD1_1st
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_EML
ANAPC4_WD40
EIF3I
Beta-prop_RIG_2nd
Beta-prop_VPS8
Beta-prop_WDR75_1st
Beta-prop_DCAF12
NBCH_WD40
Beta-prop_TEP1_C
Beta-prop_DCAF4
Beta-prop_WDR19_1st
Beta-prop_Vps41
Beta-prop_IFT140_1st
Motif
Other DBs
NCBI-GeneID:
139812679
NCBI-ProteinID:
XP_071633808
LinkDB
All DBs
Position
5:complement(14829843..14834982)
Genome browser
AA seq
693 aa
AA seq
DB search
MPKIRIKQTPNSLWLRQRELGVKFPLGHSDDFHKTLYSSIQPITSWDHGDNLTAARHGGV
FNLEYSPDGSLLLAACEKKSILMFDPLCRKLIHAIDNAHNDCVNCVRFLDQRMFATCSDD
STVALWDARNLKQRIRTLQGHSNWVKNIEYSPSDSLLLTSGFDGSIYTWDINSFTENSFV
YNRVFHTNGLMRTRLTPDTSKMLICTTSGYLIIIHNLKLSTLSQDLAGFKPNMYRLMQLS
QTTIPVAASYTHLFAHTRTHNRVEFLTDFPIGDDAEVISSLQVHPQGWCALSRNVSSGEK
SEWTCVHDIQEREASSNVEQVNEGEEGRLTSLNMEEFEDFPQSQSSRSGMTSSFVIENGN
RARIVHDVSDVRSNSFDSPIRVSADAAPSSIRSSRNSWQVTARRNLRSQSRSPRPDRNAV
RTNFDMVEVSSSTSAAADSRVNAIHDDDDRPEDQHVDDNDNSAYDASADDRIYRSPRPRS
QLNELRRRNMIDNFTSGNVELHVSTSDVWEALVAIREARLRRERESQFYPGTERRDWLPR
SNNGVSVNLPRSSHTVVIIGDRTRVQNLQNRQNLQTMYAIPRNHKIHQNTPRLTHYIEEP
NVGSGYIKELCFSADGRLICSPFGYGVRLLAFSNNCSELSNCVPPANESVQLHELATHIG
HSDIVVSTKFSPKHYLLVSGCLSGKIVWHQPVV
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atgccgaagataaggatcaagcagacgccgaacagtctctggttaaggcaacgcgagctg
ggtgtcaagtttccactgggccacagcgacgacttccacaagaccctctactcctccatc
cagcccatcacctcgtgggaccatggggataatctaaccgccgcgaggcacggcggagta
ttcaacttggagtactcgccagacgggtccctcttgctggcggcatgcgagaagaagagt
attttaatgtttgacccattatgtaggaaattgatacacgcgatagataatgctcacaat
gactgcgtcaactgtgtaaggtttctggatcagcgtatgttcgcgacttgttcggacgac
agtacggttgctctgtgggacgccaggaacttgaagcaaaggataagaactcttcagggg
cattctaattgggttaaaaacatagaatacagtccgagcgatagcttgttattgaccagt
ggatttgacggtagcatatatacttgggatattaatagttttacagaaaatagctttgtg
tacaatcgtgtgtttcatacaaatggattaatgcgaacaagacttactcctgacactagc
aaaatgttaatatgcactacatcaggatatctcatcataatacataatcttaaacttagc
acgctaagtcaggatctggcaggattcaagccaaatatgtacaggctaatgcagttatct
caaactaccataccggtcgcagcgagttacacacatctctttgctcacactcgtacccat
aatagagtagaatttcttaccgattttcctataggcgacgacgctgaggtgatatccagc
ttgcaagttcatcctcagggatggtgcgccctgtcccgaaatgtcagcagtggagaaaaa
tcggagtggacttgtgttcacgacatacaagaacgtgaggcgtccagcaatgtggaacaa
gtcaatgagggagaggagggccgcctaacgagtctaaatatggaagagttcgaggacttc
cctcagtcgcaatcgtcgcgctcgggaatgacgtcttccttcgtgatagagaatgggaat
cgtgcccggatagtacacgacgtgtcggacgtaagatcgaattccttcgattcgcctatc
cgcgtgtccgcggacgccgcgccgtcatcgatcagatcgtcgcgaaatagctggcaggta
acggcgcgcagaaatctgcggtcccagtcgaggagcccgcgcccggatagaaacgcggtg
agaacgaatttcgacatggtcgaggtaagctcgagcacgagcgccgccgccgattcgagg
gtaaacgcgattcacgacgacgacgacagaccagaggaccaacacgtagacgataacgac
aattcggcgtacgatgcgtcagccgatgacaggatctatagatctcccaggccacgttct
cagctcaatgaattacggcgacgtaatatgatcgacaatttcactagtggtaacgtagaa
ttgcatgtgagcacgtctgacgtgtgggaggcactcgtggcaattagggaagctagactt
cgcagggaacgggagagtcagttttatcccggtaccgagagaagagactggctgcctagg
tcgaataacggcgtgagcgtgaatcttcctcggtcgtcccacacggttgtgataatcggc
gaccgtacgcgggtacaaaatctgcaaaaccgccaaaatttgcagaccatgtacgcgata
ccgaggaatcacaagatccaccagaacacgcccaggttgacgcattacatcgaggaaccc
aatgtcggttccggttatatcaaggaactgtgcttctcggccgacggtagattgatatgc
tcgccattcggttacggggtacgattactggcgttctcgaataactgctccgagctgtct
aattgcgttccacccgccaacgagtctgtgcagcttcatgagttagcgacgcacattggc
cattccgatattgttgttagcacgaaattctcacctaagcactatctgctcgtgtccggc
tgcctcagtggtaagatcgtctggcaccagccggtggtttag
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