Temnothorax longispinosus: 139812972
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Entry
139812972 CDS
T10889
Symbol
Smc5
Name
(RefSeq) structural maintenance of chromosomes protein 5
KO
K22803
structural maintenance of chromosomes protein 5
Organism
tln Temnothorax longispinosus
Brite
KEGG Orthology (KO) [BR:
tln00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tln03400
]
139812972 (Smc5)
DNA repair and recombination proteins [BR:
tln03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
139812972 (Smc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_15
AAA_21
AAA_29
SMC_hinge
YfjT_2
ATG17_like
RdRP_helical
CLIP1
AAA_27
CCDC39
Motif
Other DBs
NCBI-GeneID:
139812972
NCBI-ProteinID:
XP_071634268
LinkDB
All DBs
Position
5:complement(20778712..20785688)
Genome browser
AA seq
1046 aa
AA seq
DB search
MNDNVENGIITHIYMENFVTYDKATVTPGRYLNVIIGPNGSGKSTVVAAIVLGLGGKPSI
IGRALHIGEYVKYGRDTAKIEIHLKNNSKRDSIVTRTFTKDGKSTWMINGTPTSAKSVQE
FTAKLNIQVDNLCQFLPQDKVQDFSKMDAQALLENTERSVGDPKLLEYHLQLKEQRANFK
KLEVDVGKTKKLLESKTQRRDGLQQTVATIKEKKMMKNKILTLQQKKAWMLYDHMRRKLV
ESKKTRDTAVKEMQAIDADLKPLNEKIEKLKSDMTTLKASLKNHNNKVQAKNTKLRNIMN
DILSCENKIKEAENICSRNIQAEQTRDQDIKLAQQQKSKLENDFSLMIEEIGSEESLTTQ
LQNIATNMEEHRKKVNKLTNKRDTSKHEDDNISRDIRAVQAELKNFDIDVKRLELLKQRD
MNAYKAVLWLKENKNKFSATVHQPMLLNINVKDASFAKYLENIISFRDLVAFTCEDKKDM
NLLLKYLRDQQKLQVNVVHSDPMKRISMQPNIPMENIKKFGFKYYLAELIEVPPSIMNYL
VSMYHLHNIPVGTNEIENNTNYIPHSLHSYFSENNIYSVSISKYTREVSTRISRVNGNGM
LSIVLDKAKLQDLQERLQKLQEMKSQKLNHIKEIEDEISEETKALEEYRTKRNKYQQNIQ
HIQALKSRIHMAENKIKQMEMARTSIENIKATCTKEIKAIRKKQLQKYKECNAVLRECFD
CNTSNVDLKFAIALLQQTLMTKENDAEELKDKFTKAERTFKQCDEEYQPLRREAERLYKE
ALATTKNLSPQNKEFKIYNKAFEKLPVTIAEINNELNTAQAKVFCMAKNVDTENILREYE
DIQENIHALTEFIKKKTVVLEKMTTEIENLKEKWLYPLEQLVEKINSNFSSYFFAMDCAG
EVTLSHGENNLDFDQYGLKIKVKFRDADELQELTRHFQSGGERTVTTAIYMIALQELSRV
PFRCVDEINQGMDAVNEKRVFDLLVKMTGRPGSSQYFLLTPKLLPGLSYAETVTVHCVFN
GSVKADDEEFEFNVEDYCNFLESSAD
NT seq
3141 nt
NT seq
+upstream
nt +downstream
nt
atgaacgacaacgtcgagaacggaatcatcacccatatatatatggagaattttgtaact
tatgacaaagcgacagtgacccctggaagatatctcaatgttatcattggacctaatggt
tccggcaagtccaccgtcgtcgccgctatagttctcggtctaggaggcaagccgagtatc
attgggcgggcccttcacataggagaatacgtgaagtatgggcgtgatacagcaaaaata
gaaattcatctaaaaaacaactccaaacgagattctatagtgactagaacatttaccaag
gatggaaagtcgacgtggatgattaatggcactccgacaagtgcaaaaagtgtacaggaa
ttcacggccaagcttaatattcaggttgacaatctttgtcagtttttgccacaagataag
gtacaagatttttcaaaaatggatgctcaagcattgttagaaaatacagaaagatctgtc
ggagatccaaagcttcttgagtatcatctacaattgaaagaacaaagagccaatttcaag
aaactagaggtcgatgtaggcaaaacaaaaaagttattggaatccaaaactcagaggcgt
gatgggctacaacaaactgttgcgacgataaaagagaaaaaaatgatgaagaataagatt
ctgacgttgcaacaaaaaaaggcatggatgctctacgatcacatgcgaaggaaattagtg
gagtcaaagaaaaccagagatacagcagtaaaagaaatgcaagcaatagacgcagaccta
aaaccgttaaatgagaagattgagaaattgaagtcggatatgacaacgttaaaagcttct
ttaaaaaatcacaacaataaagttcaggctaagaatacgaaattaagaaacattatgaat
gatattcttagctgtgaaaacaagatcaaggaagctgagaatatttgttctcgaaacatc
caagcggaacaaactcgagatcaagacattaagcttgcgcaacagcagaaatccaagctt
gagaacgacttctctctcatgattgaagagattgggtcagaggaaagtttaacgacgcaa
ttgcaaaatatagcaactaatatggaggagcatagaaaaaaagttaataagcttaccaat
aaaagagacacatcaaagcacgaagacgataacattagccgtgacattagagctgttcaa
gcggaactcaagaattttgatattgatgtgaaacgattggaactgttgaaacaaagagat
atgaatgcatataaagctgtgctttggttaaaagagaataaaaacaagttttcagcgaca
gtgcatcagcccatgttgctcaatattaacgtaaaagatgcttcatttgccaaatattta
gaaaacattatatcgtttcgggatttagttgcattcacatgcgaggacaaaaaggatatg
aatctactactgaagtatttgagggaccaacagaaactgcaagtcaatgtggtacactct
gatccgatgaaaagaatctcaatgcaaccgaatataccgatggagaacattaagaagttt
ggctttaagtattatttagcagagcttattgaagtaccaccatccataatgaactatcta
gtctcgatgtaccacttacacaatattcctgttgggactaatgagatcgaaaataataca
aattatatacctcatagtttacactcttattttagtgaaaataatatatactctgtgagc
atatctaaatatacgcgcgaagtatcgaccagaatatcacgggtcaatggaaatggaatg
ctatctattgttctggataaggctaaattacaagatcttcaagaacgattacaaaagttg
caagaaatgaagagtcaaaaactgaatcatattaaagagatagaagatgaaataagtgag
gaaactaaagcattagaggagtatagaaccaaaagaaataaatatcagcaaaatattcag
catattcaagcattaaaaagtagaatacacatggctgaaaacaaaattaagcagatggaa
atggcccggacgagtattgaaaatatcaaagcaacatgcaccaaagagattaaggctatt
cgaaagaaacaattgcaaaagtataaggaatgtaatgcagttctgcgagagtgtttcgat
tgcaatacaagtaatgtagacctcaaatttgcaatagcattattgcagcaaactttaatg
accaaagagaatgatgctgaagaattaaaggataaattcacaaaagcagagagaacattt
aagcaatgtgatgaagaatatcaacccttaaggagagaagctgaaagactatataaggaa
gcattggcaaccacaaaaaatcttagtccacaaaataaggagtttaaaatttacaataaa
gcttttgaaaaattaccagtcaccatagctgaaataaataacgaattaaataccgctcaa
gcaaaagttttttgtatggcgaaaaatgtggacaccgagaatatacttcgtgaatatgaa
gatatacaagaaaatattcacgccttaactgaatttattaaaaaaaagactgttgtatta
gagaaaatgacgacagagatcgaaaacttaaaggaaaaatggttatatccattggagcaa
ctggttgaaaagataaactcaaactttagttcttactttttcgcgatggattgtgctggc
gaagttacactctcgcatggtgaaaataacctcgattttgaccaatatggtctaaagatc
aaggtaaaattccgtgatgcagacgaattgcaagaattaacaaggcattttcagagcggt
ggcgaaagaacggtgactactgctatttacatgatagccctgcaagaattatcgcgtgtg
ccatttcgctgtgtggatgaaattaatcagggcatggatgcagtgaacgaaaaacgagtc
ttcgatttacttgtaaaaatgacaggaaggccaggcagctcccaatattttttgctcacg
ccgaaacttctacctggattatcgtacgctgagacagtgacagtccattgcgtctttaac
ggatcagttaaagcggatgatgaagaatttgaattcaatgtagaggattactgcaacttt
cttgaatcgtcagctgattaa
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