Temnothorax longispinosus: 139813012
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Entry
139813012 CDS
T10889
Name
(RefSeq) F-box/WD repeat-containing protein 9-like isoform X1
KO
K10265
F-box and WD-40 domain protein 9
Organism
tln Temnothorax longispinosus
Brite
KEGG Orthology (KO) [BR:
tln00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tln04121
]
139813012
Ubiquitin system [BR:
tln04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
139813012
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
F-box-like
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_TEP1_C
F-box
WD40_Prp19
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WDR55
Beta-prop_Vps41
F-box_4
WD40_2
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_2nd
Beta-prop_SCAP
Beta-prop_WDR19_1st
WDR90_beta-prop_4th
EIF3I
Motif
Other DBs
NCBI-GeneID:
139813012
NCBI-ProteinID:
XP_071634347
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Position
5:1298816..1304467
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AA seq
493 aa
AA seq
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MYKNIRERCIFAHITMKEIRDRDFLFLTLCAAPYLRSERLLSAGVYTILTFVEPSASVSS
SRSSKNIQICTVREKMNDENARCAYDGEEYAQLSLLQLPVEMFLHICSFLDASTLVHSLS
LVCKQFYQILKDDDLLWKARIDHILPNASHSLLCPERPDNFWKLSCVAIEKQTALWKQQN
SMENLRFPDLCKNANSVLLMPVDGITYLVGMKDCNLFCKKLSYREEPFYEVKALWRSAFG
IESLTAINHTVYHSCPDHTVKSWVLTNTGLVHDRTYDPDPKCDLMIASADSTRCMSSCPE
QARFAIGVYDGTIYVYDSRSSSNKPISQYQPKHASVTNLAMNAEYILSACCDGPVSIWDQ
RAGRIMKSITIPDSIRFPIPEKAYPTYIDMRRDLVCVGDNTGNLHMLEPKNDFELVKSYS
TEHTDEITGVRLTHGCLITSSLDGTVIISSPTDPPKLIATLEDEYIFSMDYLNDTLAIAG
KSLVVWRPRNRRV
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgtataagaatataagagagaggtgtatctttgcgcacataacaatgaaagaaataagg
gacagggattttctattccttacattgtgcgcagctccttacttacggtcagagaggctt
ctctctgccggtgtatacaccatcctcactttcgttgaaccatcggcatcggtcagttcg
agcagatcgagtaaaaatattcagatttgcacggtgcgagaaaaaatgaatgacgagaat
gcacgctgcgcttacgacggcgaggaatatgcacaattgtcactgctgcaactcccggtg
gagatgttcctgcatatatgttcctttctagatgcgtcgacgctggtgcacagtttgagc
ttagtgtgcaaacagttctaccagattttaaaggatgatgatttactgtggaaagcgcga
attgaccatatattgccgaatgctagtcactcgcttttgtgtcccgagaggcccgacaac
ttttggaagttgtcgtgcgttgcgatcgagaaacaaacagcgctgtggaaacagcaaaat
tctatggagaatctgagatttccggatctttgcaaaaatgcaaattctgtgttgctgatg
cccgtagatggaatcacttatttagttggtatgaaagattgcaacttattttgcaagaaa
ctttcttatcgcgaggaacccttttacgaagtcaaggccctctggaggtctgcgtttgga
atagaaagtctgacggcgataaaccacacggtctaccatagttgtccagatcatacggtc
aaatcgtgggtgctcaccaacaccggtctcgtccatgacagaacttatgatccagatcca
aagtgcgacttaatgattgcgtctgctgattcgacgcgatgtatgtcatcgtgtccggag
caggcccgctttgcgatcggcgtatacgacgggacaatatacgtgtacgattcgagatcg
agtagtaataagccgatcagccagtaccaacccaaacatgcatcagtgactaacctggcc
atgaacgcagaatacatcctgtccgcttgctgtgacgggccggtatccatttgggatcag
agagccggacggatcatgaagtctatcacaattccagattccatcagattcccgattcca
gaaaaagcgtaccccacgtacattgatatgcgacgggatttggtttgcgttggggacaac
acgggaaacttgcacatgctagaaccaaagaacgatttcgagctagtgaaatcttattcc
accgagcatacggacgagataacgggagtgcgtctgacgcacggatgcctgataacgagt
tccctagacggcaccgtcataatttcgagtcctacggatccgccaaagctcatcgctact
ttagaggatgaatatattttcagcatggactacctgaatgacactctcgcgatagcaggc
aaaagtctcgtcgtatggcggccgagaaatcgacgtgtttaa
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