Temnothorax longispinosus: 139813049
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Entry
139813049 CDS
T10889
Symbol
Sin3a
Name
(RefSeq) paired amphipathic helix protein Sin3a isoform X1
KO
K11644
paired amphipathic helix protein Sin3a
Organism
tln Temnothorax longispinosus
Pathway
tln04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
tln00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
139813049 (Sin3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tln03036
]
139813049 (Sin3a)
Chromosome and associated proteins [BR:
tln03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
139813049 (Sin3a)
REST complex
139813049 (Sin3a)
Heterochromatin formation proteins
Other heterochromatin formation proteins
139813049 (Sin3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sin3a_C
PAH
Sin3_corepress
Tricorn_C1
Motif
Other DBs
NCBI-GeneID:
139813049
NCBI-ProteinID:
XP_071634402
LinkDB
All DBs
Position
5:complement(14717054..14738799)
Genome browser
AA seq
1517 aa
AA seq
DB search
MKRVRGLDDVTSPPAKHSSVSAGSGLGGGGGSLDYHASSGIGVVVPGQAVRSVTSKEMPA
SIQFGTAQAQQQYTGAIVVPTATPSPIKQASSSAGGLGSTCSSSSISTGGGLHSGIGGGN
SHTMASQQPTSGSQNQVHTQQHATIRHKVHSSSVTPLASTPPGSNLGGGSGSQQFQRLKV
EDALSYLDQVKYKFSDQPQVYNDFLDIMKEFKSQSIDTPGVITRVSHLFKGHPELIVGFN
TFLPPGYKIEVQANEQGYAFQVSVSMPSPTATHTATLSQHHCTVNVGSPPVASPPTQPAK
APPVLQIMQGSGNIHHTLANSITTNSLTVHAPSPPPVSVYNNSHVSTAQAQAVSQALSQA
DGVSTGGQTQQSQPVEFNHAINYVNKIKNRFQGQPDKYKRFLEILHTYQKEQRNLKESGH
MGSTSSGATGGTKHLTEAEVYSQVAKLFENQEDLLAEFGQFLPDATNQQSSLSAMFQTNK
TASVNDHAAIVKKPIGPKTPYNNSGTISRDLREASSTAGLERDNRDHRERERERDRSNVR
DIVSGQKSGHNPGQLKRSPSFSTSATAGNSHIQHGPPTKKHKVASMRDITIAEAGKYGTL
NDYAFFDKVRKALRSQEVYENFLRCLVLFNQEIVSKSELIQLVTPFLGRFPELLHWFKDF
LGYLSDSSSTTVTNAGNAVGVETFPNSIVRSHQERPQGDLAIEIDYTACKRLGASYCALP
KSYIQPKCSGRTQLCKEVLNDTWVSFPTWSEDSTFVTSRKTQYEESIYRCEDERFELDVV
IETNASTIRVLEGVHKKMNRMTQEEIQKYKLDECMGGCSPTIHQRAIRRIYGDKAPDIIE
GLKRNPAVAVPVVLRRLKTKEEEWREAQKGFNKIWREQNEKYYLKSLDHQGINFKQNDVK
ALRSKSLFNEIETLYDERHEQGDDGNGDGQGTSGPHLVLPYKDKSVLDDAANLLIHHVKR
QTAVHKEDKQRIKLLLKHFIPDLFFHPRQELSDDERDEDDEKEDVNVATCNNSQSATTTS
SLSGLQANRSKAPTSPNTSSATSKSEPDVKVPMHALSSDPEEAYTLFMGSNNWYLFLRLH
HILCERLTKMYDRAVALAEEESKYKQQRKESTAVALRLKPKSEIEIEDYYPAFLDMVKNV
LDGNMESTAYEDTLREMFGIHAYIAFTLDKVVNYAVRQLQHLVSDNVCQQCMDLFQREQR
QPKENNGAGGLCATAYVRLSAELSYQRKAEKAMADENCFKIYIYKKDCKMTMELLDTEGD
EPVDNGCREREREGVTVSEKWSAYIDSFSAPAGQTSPKDTPALTENEQTTNHPVSSDQAA
RGGRGRKRKNTDISKKIDGNTWGSSGRASAGRKPIFLYRNVRSYRKHAARLMKGKTSSLN
ANHSDKVAESSDTPDMINSDETQCRFNPNSYTMLFIVHKDRFLYKQNSMNRARRCHPAVT
KRKDSKFHNWHASWLAKNGTDIQHRLCQDWLMGRYENLIPHRTRVITDNDLTRSPYRQYN
RFRVERLQSDLLTETCV
NT seq
4554 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgtgttcgtggactggacgacgtaacatcaccacctgcaaagcactcgtcggtg
agcgcgggaagtggcttaggtggtggaggaggtagtttagattaccacgccagcagtgga
ataggggttgttgtacctggtcaagcagttcggtctgttacttcaaaagaaatgccagcg
agtatacagtttggtactgcccaagctcaacaacaatataccggagcgattgttgtgcca
accgcaacgccatctcccatcaagcaggcgagtagctctgcgggaggactcggttccacg
tgtagcagtagcagcataagcactggcggtggtttgcatagtgggataggtggtggcaat
agtcatacaatggcttctcaacaacctacatcaggttcgcaaaatcaagtccatacgcag
cagcacgcgacaataaggcataaggtacattctagcagtgtaacaccgctagcttccact
ccacccggctctaatctaggaggaggaagtggatctcaacagtttcagagattaaaagtg
gaggatgcattatcttatctggatcaagtaaaatataaatttagcgatcaaccacaggtg
tacaatgacttcttagacattatgaaagagttcaaatctcaaagtatagatactccaggc
gttataactcgagtgagtcatctcttcaaaggacatcccgaactcatcgttggtttcaat
acatttctcccaccaggctacaagatagaggtacaagcaaacgaacaaggatatgctttc
caagtatcagtcagtatgcctagcccaacggcaacgcataccgccacgttatcgcagcat
cattgtacggtgaacgttggttcacctcctgtagctagtccgcccacgcagcctgcaaag
gcaccacccgttttacaaataatgcaagggtcaggtaatatacaccatactttggcaaac
agtattacaaccaacagcttaactgttcacgcgccatcaccgccgccagtatcagtgtat
aataattcacatgtgagcactgcacaggcgcaagctgtcagtcaagctttaagtcaagcg
gatggtgtgtcgactggtggacagacgcagcaaagccaaccggttgaattcaaccatgcg
ataaactatgttaataaaattaagaatcggttccaaggtcagccagacaaatacaaacgt
tttctggaaatattgcatacgtatcagaaagaacagcgaaatttaaaggaatctggccat
atgggaagtacaagttccggtgcgacaggtggtacaaaacacttgacagaagcggaagtt
tatagccaagttgctaaattgttcgaaaatcaagaggatttacttgctgagtttggacaa
tttttgccggatgccactaatcagcaaagttcgttgtctgccatgtttcagactaataag
acggcatcggttaacgatcacgcggcgattgtcaagaaaccaattggacctaaaacaccc
tacaacaattctggtaccatatcgagagatcttcgagaagctagtagtacggctggactg
gaacgcgacaatcgagatcatagagaacgagaacgggagcgggatagatcgaacgtaaga
gatatcgttagcggccagaaatccggacacaatcctggacaattgaagaggagcccgtca
ttctcgacttcggcaacagcgggaaattctcatatacaacatgggccacctacgaaaaag
cacaaagtggcttcgatgcgcgatattactattgcggaagccggcaaatacggtaccctg
aacgactatgctttctttgataaggttcgaaaggcactcagatcacaagaggtttacgaa
aactttcttcgatgccttgtacttttcaatcaagaaatagtatccaagtcggagctcatt
cagctggtgacaccgtttctcggccgttttcccgagttactacattggttcaaagatttt
ctcggttacttatccgattcatccagcacgacggtgacgaacgcaggaaacgccgtaggc
gtagagactttcccaaacagcattgtgcgcagccaccaggaacggccgcaaggtgacttg
gcgatagaaattgattatacagcatgcaagcggctgggggcgtcgtattgcgcattgcca
aaatcgtacattcaaccaaaatgcagtggcagaacgcaattgtgtaaggaggtccttaat
gatacttgggtgtcatttccaacttggtcagaagacagcacatttgtaacgtcaaggaaa
acacaatatgaagaatctatatatcggtgcgaggatgaacgttttgaattggacgtcgtt
atagaaactaatgcgtcgacgatcagagtgctcgagggtgttcataagaaaatgaacaga
atgactcaggaggagatacagaaatacaagctcgacgagtgtatgggtggttgttcccct
acgattcatcaacgagcgataagaaggatatatggcgataaagctcccgatatcatagag
ggtctcaaaagaaatcccgcggtagccgtgcccgttgtgctccgccgtttaaagaccaag
gaggaagaatggcgggaagcgcaaaagggatttaataaaatctggagggagcaaaacgaa
aagtactacttaaaatcgttggatcatcagggaattaattttaaacagaatgatgtaaaa
gcgttgagatctaagagtctgttcaatgaaattgaaacattgtacgacgagaggcacgaa
cagggtgacgatggtaatggcgatggtcagggaaccagcggtccacatctcgttctaccg
tacaaagacaagtccgtattagacgatgctgctaacctcttgatccatcacgtcaaacga
caaaccgctgtccataaagaagacaaacaacggataaaactgttattgaaacattttata
cctgatctttttttccatccccgtcaagaactcagcgatgacgaaagggacgaagatgat
gagaaggaagatgtgaatgtggcaacgtgtaataattctcaatccgcgacgactacttca
tcgttaagtggtttgcaagctaataggagtaaggcccctacgtcgccaaacacatcttcc
gccaccagcaaaagtgaacccgacgtcaaagtacccatgcacgctctctcgagcgatccc
gaagaagcgtacacacttttcatgggtagtaacaattggtacctcttcctgaggttacat
catatactttgtgagagattaacgaaaatgtacgacagagcggtcgctctcgccgaagag
gaatccaagtataagcagcagcgcaaagaaagtacagcggttgctttgagattaaaacca
aaaagtgaaattgaaattgaagattattaccctgcctttctggatatggttaaaaatgtc
ctcgacggaaatatggaaagcacagcatacgaagacacattacgagaaatgttcggtata
catgcctatattgcctttactctcgataaggtcgttaattatgctgttaggcaattgcag
cacctagtctcagataacgtttgtcaacaatgcatggatttattccaaagagagcaacgt
cagcctaaagaaaataatggagccggtgggttatgcgccacggcctacgtgagattaagc
gctgaactgtcgtatcaacgcaaggcggagaaagcaatggcagatgaaaactgtttcaag
atatatatatataaaaaggactgtaaaatgacaatggagttgttagatacagagggcgac
gaaccggtggataacggctgtagagagagagaaagggaaggcgttacagtctctgaaaaa
tggtcggcgtacattgatagtttttctgcaccagctggtcagactagccccaaagatact
cctgccttaacagagaatgagcagacgaccaatcatcctgtgagtagcgaccaggcagca
agggggggaaggggcagaaaacgcaagaacactgacattagcaagaagattgacggaaat
acttggggttcttcaggcagagcctcagcaggacgtaaacccatttttctctatcgcaat
gttagatcttatcgaaagcatgccgcgaggttgatgaaagggaaaacatcttcgcttaac
gctaatcattcggataaagtcgcagagtcaagtgacactccagacatgatcaattccgac
gaaacacaatgtagatttaatcccaacagttatactatgctcttcattgtccacaaggac
agatttctttacaaacaaaactccatgaatcgtgctagacggtgtcatccggccgtaacg
aagcgtaaggattccaagtttcataattggcatgcatcgtggttggctaagaacggcaca
gatattcaacatcgattgtgccaagactggttaatgggacgatatgagaacttgattccc
cacaggacacgagtgataacggacaacgatctgacacgttccccctatcggcaatacaat
cgtttccgagtagaacgtctgcaatctgatctattgacagagacgtgcgtctaa
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integrated database retrieval system
