Temnothorax longispinosus: 139813397
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Entry
139813397 CDS
T10889
Name
(RefSeq) probable ATP-dependent RNA helicase pitchoune
KO
K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:
5.6.2.7
]
Organism
tln Temnothorax longispinosus
Brite
KEGG Orthology (KO) [BR:
tln00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tln03041
]
139813397
03009 Ribosome biogenesis [BR:
tln03009
]
139813397
Enzymes [BR:
tln01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
139813397
Spliceosome [BR:
tln03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
139813397
Ribosome biogenesis [BR:
tln03009
]
Eukaryotic type
90S particles
Helicases
139813397
Pre-60S particles
139813397
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
AAA_30
Helicase_C_2
AAA_22
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
139813397
NCBI-ProteinID:
XP_071634999
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All DBs
Position
1:278613..282983
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AA seq
595 aa
AA seq
DB search
MSVPEKVLMRKIKKREKTKLTVLKRREEEKDAIKPEKIPETIPQQNTEDIPPKKKMKLKI
LEKSERSEVAEQLPTTDNENLPGTAVGFEVTNDTSFSVLSEKVCENTLKAIKDMGFTNMT
EIQAKAIPPLLEGRDLVGAAKTGSGKTLAFLIPAVELIYKLKFMPRNGTGCIIMSPTREL
SMQTFGVLKELMKYHYHTYGLLMGGASRQTEAQKLEKGINIIVATPGRLLDHLQNTPDFL
YKNLQCLVIDEADRILDIGYEEELKQIINILPKRRQTMLFSATQTQKVATITTLALKKEP
IYVGVDDDKEMATVEGLQQGYVTCPSEKRFLLLFTFLKKNRKKKMMVFFSSCMSVKYHHE
LLNYIDLPVMSIHGKQKQTKRTTTFYQFCNASSGILLCTDVAARGLDIPDVDWIVQYDPP
DDPKEYIHRVGRTARGEGSSGHALLILRPEELGFLRYLKEARVPVNEYEFSWNKIADIQL
QLEKLISKNYFLHQSAKDAFKNYVRAYDSHHLKQVFDIETLDLVKVAKSFGFTVPPAVDL
KVGISKSSRPRKRLGGGGYGHFKNINDPSSAKRLNRTKTFRQIGKRGQDNRQFSR
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtgcccgagaaagtgctgatgcgaaaaattaagaaacgggaaaagacaaaatta
acagtgctaaagcggcgagaggaggagaaagatgcaatcaagccagaaaaaatacccgag
acgatacctcagcaaaacacagaggatatccctccaaaaaaaaagatgaagttaaagata
cttgagaaaagtgaaagatctgaggtagctgaacaacttccgactactgacaatgagaat
ttacctggcacagctgtaggttttgaagtgacaaacgatacaagcttctcggtgttgagc
gagaaggtatgcgagaatacgctgaaggcgataaaggatatgggttttacaaatatgact
gagatacaagcgaaagctattccaccccttctggaagggagagatttggttggcgctgcc
aaaactggatctggcaaaactctggcgttcttaattcccgccgtcgaactgatttacaag
ttgaagtttatgccccgtaacggcaccggttgcatcattatgtctcccacgagagaattg
tctatgcaaactttcggggtcttgaaagaattgatgaagtatcattatcacacgtacggt
ctgctgatgggtggtgccagtaggcagaccgaagcgcaaaagctcgaaaagggaatcaac
attatcgtggcaacgccgggacgattattagatcatttgcaaaatacgcccgatttctta
tacaagaatcttcagtgtctggtcatcgatgaagctgatcgtattctggatattggatac
gaagaagagttgaagcaaatcatcaacatccttcccaaacgccggcaaactatgctcttc
agtgcgacgcagacacagaaggtagcgacgataacgacgttagccctaaaaaaagaacct
atatacgtgggggtcgacgacgacaaggaaatggcgactgtggagggcttgcaacaaggc
tacgttacgtgcccgagcgagaaaagatttttacttctgttcacgttcttaaagaaaaac
cgaaagaagaaaatgatggtcttcttcagttcctgcatgtccgttaaatatcaccacgaa
ctcctaaactacatcgatttaccagtgatgagtatacacggtaagcagaaacaaacgaaa
aggaccacgaccttttaccaattttgtaacgcttcttcgggtattctgctttgcactgac
gtggctgcgagaggtctggatatacccgatgttgactggatcgtgcagtacgatccacca
gacgatcccaaggaatacatccatcgtgttggtcgaactgctcgcggggagggtagcagc
ggtcatgctttgctgatattacgaccggaggagcttggcttccttcgttatctcaaggaa
gctcgcgtacccgtgaacgaatatgaattttcttggaataaaatcgccgatatacaatta
cagcttgagaagttgatatcgaagaactatttcttacatcagtcagcaaaggatgcattt
aagaattacgtcagagcgtatgattcacatcatttgaagcaggtctttgatatagagact
ctggatttggtgaaagtcgctaaatcgtttggatttaccgtaccaccagcagtagatttg
aaggtgggaatcagcaagtcttcacgaccacgaaaaaggctcggcgggggcggctatgga
catttcaaaaatataaacgacccgagttcggcaaagcggctgaatcgcaccaagaccttt
cgccagataggcaaacgtgggcaggacaatcggcaattcagcagataa
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