Temnothorax longispinosus: 139813598
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Entry
139813598 CDS
T10889
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit-like
KO
K07466
replication factor A1
Organism
tln Temnothorax longispinosus
Pathway
tln03030
DNA replication
tln03420
Nucleotide excision repair
tln03430
Mismatch repair
tln03440
Homologous recombination
tln03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
tln00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
139813598
03420 Nucleotide excision repair
139813598
03430 Mismatch repair
139813598
03440 Homologous recombination
139813598
03460 Fanconi anemia pathway
139813598
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tln03000
]
139813598
03032 DNA replication proteins [BR:
tln03032
]
139813598
03400 DNA repair and recombination proteins [BR:
tln03400
]
139813598
Transcription factors [BR:
tln03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
139813598
DNA replication proteins [BR:
tln03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
139813598
DNA repair and recombination proteins [BR:
tln03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
139813598
MMR (mismatch excision repair)
139813598
DSBR (double strand breaks repair)
HR (homologous recombination)
139813598
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
zf-like
HobA
zf-AN1
Motif
Other DBs
NCBI-GeneID:
139813598
NCBI-ProteinID:
XP_071635277
LinkDB
All DBs
Position
5:15723116..15728321
Genome browser
AA seq
600 aa
AA seq
DB search
MYNLTEGALERIMRGTDVEKPVLQVWGYKKLPRTVNKDGVTTDRYRLLVSDGQRYNSFTM
LATQLNHLITDEILTDNAICRILNYHLSLMNNSGKERPVMVILGIEVLVSGSKVGHKIGN
PTNIDIKSDAEVTSTSTSPFPTNGAAKRDSSNHHASSDISTTPIAALSPDQNRWVIKVRV
TNKSPIRTWSNSRGEGKLFSMDLIDESGEIRCTAFKDQCDKFYEMIEPGNVYYISRCTLK
AANKQFNILKNDYEMTVTGDTEIVPCHENSDDIPTLQFNFCPISQVENKEKDALIDVLGV
VTTVNDVQHTVQRNTGRELMKRDVDIVDDSGTMVRVTLWGKQAEDFDGSNNPILAIKGAR
VSEFNSGKHLSLIMSSVLEKDPDIPEAHRLRGWYTSVGHSQNAKSLSRAGGSGDFNAPLC
TFQEATEARLGEKMNFPDSFTVVAIVNMIRVENAIYKACPVDGCKKKLIDQSTGVFRCEK
CNRDYPNFTYRLLASMSVVDATGSRWITAFSEDAEKILGMSAQELGELKENDNDAYMQKF
DEVNFKRFLFSLRAKSEFFQDEMRIKHVCKSVAPLNYKTYLAHLIDKVSKLVHIEKLESN
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgtacaatttaacggaaggagcgttggagagaatcatgcggggcacggacgtcgagaaa
ccggtgctccaagtatggggttacaaaaaactaccgagaaccgttaataaggatggtgtc
actaccgatcgctacagattgctagtgtctgatggacagaggtataactcgttcaccatg
ttggcaactcaattaaatcatcttatcacggatgaaattttgaccgacaatgcaatctgc
agaatattaaactatcacttgagtttaatgaacaacagtggcaaagaaagacccgtgatg
gttatattgggtattgaggtgttggtttctggcagtaaagttgggcacaagataggcaat
ccaactaatatagacattaaatcagatgctgaagtcacatctacatccacatctcctttt
ccaactaatggtgcggccaaaagggattcttcaaatcatcatgcctcttctgatatatcc
acaacaccaatcgctgcattaagtcctgaccaaaacagatgggtgatcaaagttcgcgtg
actaataagtctccaatcagaacgtggagcaactcccgtggagaaggcaagcttttttcc
atggatctgatcgatgaaagcggcgaaattcgatgtaccgcattcaaagatcaatgcgac
aagttctatgaaatgatagagcctggaaatgtgtactatatctcgcggtgcacgctgaag
gcagcgaacaaacagtttaatattttgaaaaacgattacgagatgacggtgaccggcgat
acagagatcgtgccttgccacgaaaacagtgatgacatcccgacgttgcagtttaacttc
tgtcccataagtcaagtagaaaacaaagaaaaagatgccttaatagatgtcttgggcgtt
gttacaactgtcaacgatgtacaacatactgtacaacgaaataccggccgagagctcatg
aagagagatgttgatatcgttgatgacagcggcacaatggtgcgcgttacactgtgggga
aagcaagccgaggactttgatggttctaataatccgatcttagccattaaaggagcgcgt
gtgagcgaatttaatagtggaaaacatttatcccttataatgtcttccgtacttgaaaag
gatcctgatattcctgaagcacacagattgcgcggatggtacacttcagtcggccattcg
cagaacgctaaatcattgtctagagcaggtggaagtggtgacttcaacgcgccgttgtgc
actttccaggaggcgaccgaagctcgattgggggaaaaaatgaatttcccagattcattt
acagtggtggcgatcgttaacatgattcgcgtggaaaatgccatctacaaggcgtgtccc
gtagatggttgcaagaagaagttaatcgatcaatctaccggagtatttagatgcgagaag
tgtaacagggactatccaaatttcacgtatcgcttgctggcaagtatgagtgtagtagac
gcaacaggcagtcgctggataactgccttcagcgaagatgctgagaaaatattgggcatg
tcggcgcaagagttgggggaattaaaggagaacgataacgacgcttatatgcagaaattt
gacgaagtgaatttcaagaggttcttattcagtttaagggcgaaatcagaattttttcag
gatgaaatgagaataaaacacgtctgtaagtcagtcgcgccgctaaattacaagacttac
ctagcacatctgattgacaaagtctccaagttggtacacatcgagaaattggagtcgaac
taa
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