Temnothorax longispinosus: 139813645
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Entry
139813645 CDS
T10889
Name
(RefSeq) eukaryotic initiation factor 4A-III
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
tln Temnothorax longispinosus
Pathway
tln03013
Nucleocytoplasmic transport
tln03015
mRNA surveillance pathway
tln03040
Spliceosome
Brite
Enzymes [BR:
tln01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
139813645
Messenger RNA biogenesis [BR:
tln03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
139813645
mRNA cycle factors
Stress granule specific factors
139813645
Spliceosome [BR:
tln03041
]
Complex C
Other components
EJC/TREX
139813645
Ribosome biogenesis [BR:
tln03009
]
Eukaryotic type
90S particles
Helicases
139813645
Translation factors [BR:
tln03012
]
Eukaryotic type
Initiation factors
eIF-4
139813645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139813645
NCBI-ProteinID:
XP_071635350
LinkDB
All DBs
Position
5:complement(721964..724547)
Genome browser
AA seq
402 aa
AA seq
DB search
MAEKSRRVAQTEDLSNVEFETSEDVEVIPTFDNMGLRDELLRGIYAYGFEKPSAIQQRSI
KPIMKGRDVIAQAQSGTGKTATFSIAILQSLDTQVRETQVLVLSPTRELATQIQKVILAL
GDFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIKRRVLRTRAIKMLVLDES
DEMLNKGFKEQIYDVYRYLPPATQVVLVSATLPHEILEMTSKFMTDPIRILVKRDELTLE
GIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVCSMHG
DMPQKERDNIMKEFRSGQSRVLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSG
RFGRKGVSINFVKTDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atggcggagaaatcacgtcgtgtggcgcaaaccgaagatttgtcaaacgtcgagtttgaa
accagcgaagatgtcgaggttattcctaccttcgacaacatgggtctccgcgacgaattg
ttgcgtggaatctatgcttacggttttgagaaaccgtcagccatacagcaacgatctatt
aaacctatcatgaagggcagagatgtgatagctcaggcacaatctggtacgggaaaaact
gctaccttctcgattgcgatattgcagtcgttggacacgcaagtacgagaaacccaagtt
ctggttttgtctccgactcgagaacttgccactcaaatccagaaggttattctcgcattg
ggagacttcatgaatgtacaatgtcacgcttgcattggtggtacaaatcttggagaagat
atcagaaagcttgattacggtcagcatgtagtgtctggcacacctggtagagtatttgat
atgattaagaggcgagtactcaggactagggctattaaaatgctggtattggacgaatct
gacgagatgttgaacaaaggtttcaaggaacaaatttatgatgtgtatcgatatctacca
ccagcgacgcaagttgttttagtttcggccactttgccgcacgaaattctcgagatgact
agtaaatttatgacggaccccatccgtatcctcgtcaaacgtgatgaattgacattggaa
ggaatcaagcaattcttcgtcgctgtagaacgagaagagtggaaatttgacacactctgt
gatttatatgacacgttaacgataacgcaagcggttatattttgtaatactaaacgtaaa
gtagactggttgacggaaaaaatgcgagaagccaattttacagtatgttctatgcacgga
gatatgccacagaaagaacgagacaacataatgaaagagtttcgatctggccagagtcgc
gtgttaatcacaacggatgtatgggcgagaggaatcgacgttcagcaggtgtcgctcgta
attaattacgatttgcctaacaatcgtgaattgtatatccatagaataggtcgatcggga
cgtttcggccgtaagggtgtgtcgataaacttcgtgaaaactgacgatataagaattctc
cgagatatcgagcaatattattctacacaaatagacgaaatgccgatgaatgtggctgat
ctgatataa
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