Temnothorax longispinosus: 139813764
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Entry
139813764 CDS
T10889
Name
(RefSeq) aladin
KO
K14320
aladin
Organism
tln Temnothorax longispinosus
Pathway
tln03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tln00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
139813764
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tln03019
]
139813764
Messenger RNA biogenesis [BR:
tln03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
139813764
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
WD40_WDHD1_1st
Beta-prop_IFT140_1st
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Ge1_WD40
WDCP
WDR55
EIF3I
Motif
Other DBs
NCBI-GeneID:
139813764
NCBI-ProteinID:
XP_071635563
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Position
5:complement(6082611..6085567)
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AA seq
526 aa
AA seq
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MLRILSLHDFEGPVFGEAAIIGLIEGVIHYCAYDALQDEMQPFAKYLRDYPEVSVTQEIL
ATRETARTISAGELFLPVHDSVFKKIVNVWRERGLSEAIRFAAATDPEQITNVVHWIATR
LNRVLDLMDRGIYHRDVLPMSGNGSVTDIVATRDWNTSLVRCLSWHPHCTRLAVAMRDDR
IRIFSQGLLGVPVLRHSAQKSVCCLSWRPHAGRELAVACYSGVLIWTIELGAASNLLSHA
ILLKQRNHVPVTNVVWHPQGDLLASCSPTDSNIMIWNVSKEEGVPLKRVGGGGICFTCWS
PCGLRLFSASCRNIFRVWNTGVPTPWHTEKWTVPQGRVATACFGPNLTLLFATTGDPATI
FSLPLQDTIFDVKKATNNDVKIAMRLIDLTKVNFSSDDNDDYITVGGKIVSMEWDPTGKY
LAILFQDSPVIALVKTNLSRLSRIVEVQPSCLIKGFPGEVPNCINFYQKRTSWICLTIAW
SSGRVQHFPIVENESRVDTSTYSTLLPQFVRPNGSYSFDVRGYSQY
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgctccggatcttatcgctccacgacttcgagggtcccgtcttcggcgaggcggccatc
atcggcctgatcgagggcgtcatccattactgcgcctacgatgccctgcaggacgagatg
cagcccttcgccaagtacctgcgtgactatcccgaggtgtccgtcacgcaggagatcctc
gcgacccgcgagaccgcgcgcacgatcagcgccggggaactgttcctccccgttcacgac
agcgtcttcaaaaagatcgtcaatgtatggagagagagagggttgtccgaggcgatccgc
tttgccgcagccacagatccagaacagattacgaacgttgtgcactggatcgcgacgagg
ctgaatcgagtattggatttgatggacagaggaatatatcacagagatgtgttgccgatg
tcgggaaatggatctgttaccgatatcgttgctacacgggactggaatacatcgctggta
aggtgtctgtcctggcatccgcactgcactcgcctggctgtggccatgagggacgataga
attcgtattttctcgcaaggtctactgggggtaccggtattgaggcacagtgcgcaaaag
tcagtttgctgtttgagttggagaccgcacgccggtcgcgaattagcggttgcttgctat
tccggagtattaatttggacaatagagttgggagcagctagtaatttactcagccacgcg
atacttttgaagcaaagaaatcatgtacccgttacaaacgtcgtatggcatccacaaggt
gatttgttggcatcttgctcaccaacggattcaaatataatgatctggaatgtttctaaa
gaagaaggggttcctctgaaacgcgtcggtggaggtggcatatgctttacatgttggtcg
ccttgtggcttgcgattattttctgcttcatgcagaaatatttttagagtttggaatact
ggcgttccaacgccatggcatacagaaaagtggactgtaccccaaggtcgtgtagcaact
gcatgctttggtcccaacttaacgctgctcttcgccaccaccggagatcctgctacgata
ttctcgttgccgttgcaagatactatatttgacgttaaaaaggctaccaataacgatgta
aagatagctatgcgtctaatcgatttaacgaaagtaaatttttcatcggatgataatgat
gattatatcacggtgggcgggaaaatagtttctatggaatgggatccaacgggaaaatat
cttgccattcttttccaggacagtccagttattgctctagtgaaaacgaacttgagtcgt
ttatcgcggatagtggaagtgcagccgagctgtcttatcaaaggatttcccggggaagtg
ccgaactgcattaacttctatcaaaaacgtacgtcgtggatttgtttaacaatagcttgg
agcagtggacgcgtgcagcattttccgattgtggaaaatgaatctagagttgatactagc
acatattctacgttattacctcaatttgtgagaccgaatggatcgtacagctttgacgtc
cgcggttacagtcaatattaa
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