Temnothorax longispinosus: 139813886
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Entry
139813886 CDS
T10889
Symbol
Stj
Name
(RefSeq) voltage-dependent calcium channel subunit straightjacket isoform X1
KO
K04860
voltage-dependent calcium channel alpha-2/delta-3
Organism
tln Temnothorax longispinosus
Brite
KEGG Orthology (KO) [BR:
tln00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tln04040
]
139813886 (Stj)
Ion channels [BR:
tln04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
139813886 (Stj)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
VWA_N
VGCC_alpha2
VWA_2
VWA
VWA_3
dCache_1
L544_helical
MCP-like_PDC_1
DUF444
DUF3023
VWA_CoxE
Motif
Other DBs
NCBI-GeneID:
139813886
NCBI-ProteinID:
XP_071635812
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Position
5:complement(1088099..1104123)
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AA seq
1236 aa
AA seq
DB search
MRPCFIPVVVVLILIEALDRSDSISHNIVKGWADKLGFELSQLGKLVTNVDKFEDSYKSA
DITPRDGSALVREIAKDIKAMMELKISAIKRIMDVAETSAQSSPDVDPPETYEFINTKNI
TIDLEKSLHFGGDVNLDMSAVHVPTNVYERASSVIRAIKWSETLDRTFISNYELDPSLSW
QYFGSATGFMRQYPAISWPMEQVDLFDCRTRSWYIEAATSPKDILILMDTSGSMTGMRRE
IAKHVINNILDTLGNNDFVNIITFSNETKEVVPCFSNTLVQANLANIRELKRAISDLNTE
QIANFSLALTTAFQLLETFRDEQLKGARCNQAIMLITDGVPYNYKEIFEEYNWKGLDDPS
KADMPVRVFTYLIGREVADVREVQWMACANRGFYVHLCTPAEVREEVLKYVPVMARPLVL
GRTDHPTIWTPVYADVTDPKMTDWMWEQHESEEQKELVFWFNRRKKYPNMEEQDRRYVKK
QKRWYDQTSGLQKYKLMTSVSMPVFDRRENANITRQVLVNEYWVTETRETMIANLLGVAG
TDVSIEEIQKLMIPHMLGVNGYAFIVTNNGFILIHPDLRPVFQGILKPAYNSVDMAEVEL
VDNDKGPRDFANGLIVMRNKVVNQTTGNSILYTKYHYDDMKRVGRVKRKYDYMGITDTPF
TVVVSLPEHDSENYRVHAIEEIHRSHAKGKNVTDYFAGSNWRVHPDWMYCKYHYEGEHRF
NSSELQLLHFLERTRLPGWKWIDLKQRSPPPEHTAASPSHNSLPNSYKADRNSYYCDRNL
LLSLVYDAKATEWFAQQIPPNPSTKDPTEPLARLMNQMTRQQFKQRFGVVLAFMATHSGL
TRWQDILPLDEGTLPEDHFSNLYPHAIDEVWYKRAVEQYYVDPDSFVFSVPIDDEGADNT
TLVTASRAVFIKKKAPAVVVGFQFQHTALQALLQNITFNCDGNCDGNKHCGDVWACYLID
NNGYIIAAGDKTSNAGKFFGDVRGPIMSSLVKDGVFERIRIFDYQAVCFKSPPTNNAGNI
LLTPWKHFLRALSWMVGQAAWAWAKMGILESDDAEVYSYVSDDESAVHEDYHEGDDKLPP
LEPNYERLYFDRTVVMNRTRPEVCDQEVYLYLRNVSFNAFDKDVDENCEQRWYMVQPVTN
TSMLLVVVNNNCGETKFPTLSINPEEVIYENNTLVCQKALAGLERERPESCIRWHSRESE
ITEHQCGLATSTRSNLFLLMLLLMCALAGKSTFLLG
NT seq
3711 nt
NT seq
+upstream
nt +downstream
nt
atgaggccctgcttcatacctgtcgtcgtcgtcctgatcctgatcgaggcactcgaccgt
agcgacagcatctcccataatattgtgaaaggatgggcggacaagctaggattcgagctc
tcgcagttgggaaaattggtgacgaacgtggacaagttcgaggacagctataagtcggcg
gacatcacgccacgtgacggaagtgctctcgtccgcgagatcgctaaggacatcaaggct
atgatggagttgaagatctcggctatcaagaggataatggacgtggctgaaacgtcggcg
caatcatcccccgatgttgatccgccggaaacctacgagttcatcaatacgaagaacatc
accatcgacctcgagaagagtcttcactttggtggcgacgtgaatctcgatatgtcagcg
gtgcacgtgcccacgaacgtgtatgaacgcgcttcgagtgtcatccgggcgattaagtgg
tccgagacgcttgatcgcactttcatcagcaattacgagctggacccgtcgttgtcctgg
caatacttcggcagcgcgaccggtttcatgcgtcaatatcctgccataagttggcccatg
gagcaggtggatttgttcgactgcagaacgaggagctggtacatcgaagcggctaccagt
ccgaaagatattctcatcctgatggacacgtccggtagtatgaccggtatgcggcgggag
atcgccaagcatgtgataaacaacatccttgacactctcggtaacaatgatttcgtcaac
atcattacattctccaacgagactaaagaggtagtgccgtgcttcagtaataccttggtc
caagctaatctggcgaatatacgagagttgaagcgagccatctcggatctcaatacggag
cagattgccaacttctctctggctttgacgaccgcttttcaattgctcgaaacattccgc
gacgagcaattgaagggtgctagatgcaatcaagcaatcatgctgatcaccgacggcgta
ccatacaactacaaggagatctttgaggagtataactggaagggtctggacgacccttcg
aaggccgatatgcctgtcagagtattcacctatctgatcggtcgggaggtggcagatgtc
cgggaggtgcagtggatggcttgcgccaatagaggattctacgtacatttatgcaccccg
gcggaagtcagagaagaggtgttgaaatatgtgccggtgatggcgaggcccttggtattg
ggccgtacagatcatccgaccatctggacacccgtctacgccgacgtgacggatccgaaa
atgaccgactggatgtgggagcagcacgaaagtgaggagcagaaggagcttgtcttctgg
tttaacaggagaaagaagtaccccaacatggaggaacaggatcggcgatacgtgaagaag
cagaagcggtggtacgatcagaccagcgggttgcaaaaatacaaactaatgacctcggtc
agcatgccagtgtttgatcgacgtgaaaacgcgaacatcacaaggcaggtgctggtgaac
gaatactgggtgacagaaacaagagagacgatgattgccaatctccttggtgtcgctggc
acggacgtatcgatcgaagaaatccagaaattgatgattccacacatgctcggcgtcaac
ggttatgcctttatcgtgaccaacaatggtttcatcctgattcatcccgatcttcgacca
gtgttccagggtattttaaagccggcatataatagcgtcgatatggcagaagttgagcta
gtggataacgataagggccccagagatttcgccaacggactcattgtgatgcgtaacaaa
gtggtgaatcagacgactggtaattcgatcctttacacaaagtatcattacgatgacatg
aaacgtgtcggcagagtaaagagaaaatacgattacatgggaataacggacactccattc
acagtagtggtcagtttgcccgagcacgattctgaaaattaccgcgtgcacgctatcgag
gagatacatcgatctcacgctaaagggaaaaacgtgacagattactttgcgggtagtaac
tggcgggtgcaccccgattggatgtattgcaagtatcactacgagggtgaacacaggttc
aattcctcggagttgcagctcctacattttctggagcgtacccgcctaccaggctggaag
tggatcgacttgaagcaacgatccccaccgccggaacacaccgctgcgagtcctagtcat
aactctcttcctaattcctacaaggccgacaggaactcgtactattgcgacaggaatctg
ctgctcagtctggtatacgatgctaaggcaaccgagtggttcgcccagcaaatcccaccg
aatcccagcaccaaggatccaacagaacctttagctaggctgatgaatcagatgaccagg
cagcagttcaaacaacgcttcggggtggtcctggcgtttatggccacgcatagcggactg
accaggtggcaagatattctcccattagatgagggtacgctgccggaggatcatttcagt
aacctgtatcctcatgctattgatgaagtatggtataagcgagcggtcgagcagtactac
gtagacccagacagtttcgttttttccgtgccgatcgatgatgaaggtgccgacaacacc
actctagtcactgccagccgtgctgtatttatcaaaaagaaggcgccagccgtagtggtc
ggcttccaattccagcacactgccttgcaagcgcttctccagaatataacgtttaattgt
gacggtaattgcgatggtaataagcactgcggcgacgtctgggcatgttatcttattgac
aataacggctacataatcgctgccggggacaagacaagcaacgccggtaaatttttcggc
gatgtcagaggtccgataatgagcagcttagtcaaagatggtgtttttgagagaataagg
atctttgattatcaggcggtatgcttcaagagtccgccaaccaacaacgccggcaacatt
cttctcactccatggaagcatttcctgagagcattgtcgtggatggttggtcaagccgct
tgggcttgggcgaagatgggcatattggaatctgatgacgcggaagtgtatagctacgtt
agcgacgatgaatcagccgttcacgaggattatcacgagggcgacgacaaacttccgccg
cttgagccaaattacgagagattatactttgaccgaactgttgtgatgaaccgtacacgc
ccggaagtttgcgatcaagaggtgtacttgtatctacgcaacgtctcgttcaatgcattc
gataaagacgtggatgaaaattgcgagcagcgatggtatatggtgcagccggtgactaat
accagcatgttgttggtagtggtaaacaacaactgtggcgaaacaaagttcccgacactc
agcattaaccccgaggaagtgatctacgagaataacacgctagtctgccaaaaggcgctt
gccggccttgagcgagagcgaccagagtcctgtatacggtggcattctcgcgagagcgag
atcacggagcatcagtgtggcttggcgacaagcaccagatcgaacctgttccttttgatg
ttgttgctaatgtgcgcgctagccggaaaaagtaccttcctcctcggctaa
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