Temnothorax longispinosus: 139813919
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Entry
139813919 CDS
T10889
Name
(RefSeq) uncharacterized protein isoform X1
KO
K22909
zinc finger CCCH domain-containing protein 13
Organism
tln Temnothorax longispinosus
Brite
KEGG Orthology (KO) [BR:
tln00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tln03019
]
139813919
Messenger RNA biogenesis [BR:
tln03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
139813919
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
zf-CCCH_DUS3L
zf-CCCH_4
Motif
Other DBs
NCBI-GeneID:
139813919
NCBI-ProteinID:
XP_071635893
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All DBs
Position
5:complement(13977183..13985552)
Genome browser
AA seq
1413 aa
AA seq
DB search
MSKPNIRKITADPTKCNTDSSRRPSVFERLGTKPAIAAVAAAAAAAAAAAVQNTSDYCRN
WALNGSCSYGKSCKYANTHTLISPSKRAKKDNAIAGASGLIEDPFKRLTSKIVKKASHSP
DLNIEEWNQTDLEYEDEKVLERRRQLLQRELELQMKKDKEVHGKDKVRQKKKAMSSSSSS
RTSSTSSSSSSSSSEDSSSTSTSDSHKKIKKIKTKRHHAISADYNEDKDRKRKLKLKRLG
TRNDKAINKKKRKLENTSTKKDLIARSVKKYGSSSVSRKHSSSLRARSPAIQQGSTSGVT
STTAATLGSQVSVAHRASSSSKIREKNRSESPKVVKSNREVDKEDGRHYKKVRDMDECLS
KDAVKCKSFDKIKEQQEKEKNRAIDEKTKSDDRLRSKCKDKDVRSRTPPPPPSSSERSSK
YQHVKESASSKTQRSRTPSRTRRDLTPAKNPEKQSNSSNRVARDAEKKDRDSHKRDKSKE
RDDARKTEQTSSGKAKQTVTSNQDESYRRSNTSKDNFDDKTYGGDKARQKSRERQREKET
RDERPSRLNRDQRQEPQRDKDKDESQERCRNERQRERDRDRDRDRDRERERERDRERDRD
RERERERDREREREREIRERDRDRDRERDKSMKSRERDVPAVVSPAALSLSADKSSRYSS
SRIKERSLGKDVSFEKSGGTRERSRSERERERSETKALAERERSSTQSRLDGRYERSGGG
GGVVEKDVSSSRGKSTVNSPRDRMDRFRDTSLDRGSLHDKSGHVATSSSVQSTATLPPVP
PASSSSSVVAVTPTLPRDHLMDMVDSHYDRDRHRRFGVRYERGHTSEHSGRKDQARIESS
RVPSKIDRIVDRRDATSPRRAMEVDRNFGRNYGRLQTEHWDEQEEPAPHVEYRDHSHIHE
DDRRKTIEGRRYDSPFEERRVARDERSRESRYVIQTTERASFDDHRHHHHHHRHPLYPGD
KLRSGGANIRDETVSNDNWEGHHRDVEHGRDRGYQTVEWEEREWRPRTLWEGRDSLPRSE
IHDDEWNSRYDNPVGDWKSNDARKWDNQNMHVRSHYRNERSKDLEHGESTQHSKRRSYNA
PETREEPPAIHPSAKQAAIYGSMKEEPINKKLMELAEGRLCTTTREKSTDSFQKKNSQKD
KPEIKELVAVEPKRPIADESLQTLHTESDLSDISDDPDDILNMEEDTTDMETNKTRTNKK
ASDAAHRDAQSTVQEPAQLSPKEPAEENIFTSKSKDNADTVSLKNMEDDNMETMDFEEIS
DGELEEDIKTSGKGLGDALGVDWESLVKETQAKRIVPSNQDSAENRWQCKAIFYRIGISK
KYAGEDFVKKLLKKYEKNDHKEFLLNDIALMHTALARNRLLQDLGNGAIHAVDDTLYRNN
NASYDEDIDYDWETLKPSTALCEEVKCLLQQVI
NT seq
4242 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaaccaaacataaggaagataacggctgaccctacgaaatgtaatacagactct
tcacgacggccgagtgtgtttgagaggttgggcaccaaaccagcgatcgccgccgtcgcc
gccgccgcagccgctgccgccgccgccgccgttcagaatacatcggattactgcagaaat
tgggccctcaacggcagttgttcctacggaaagagttgcaaatacgcaaacacacacaca
ttgataagcccatccaagcgtgctaagaaagataatgcgatcgcaggtgcatctgggctc
attgaggatcctttcaaacggctcacgtcaaagattgtgaaaaaggcatcgcatagtccg
gacttgaacatagaagagtggaatcagacagatctcgagtacgaggacgagaaggtattg
gagagacggcggcaattgttacaacgggaactggaattacaaatgaagaaggacaaagaa
gtacatggcaaggataaagtaagacagaagaaaaaagctatgagctcctcctctagttcg
cgcacatccagcacatctagcagtagcagcagctccagcagcgaagactcatcttctacg
tcgacgtcggactcacataagaaaattaaaaagatcaagaccaagagacatcatgctatt
tccgccgattacaacgaggataaagacagaaagagaaaattgaagctcaagagattagga
acgagaaacgacaaagccatcaacaagaagaaacgtaaactcgagaacacgtccacgaag
aaggaccttatcgcgagatcagtcaaaaagtatggttcgtcgtctgtatccaggaagcat
tccagttcgttgcgcgctaggtcacccgcgatacaacagggatctacgagtggagtcacg
tctacgacggccgcaacgttgggctcgcaggtttctgtggcgcatcgcgcgtcatcgtcc
agcaaaatccgggaaaaaaacaggagcgaatcgccgaaagtggtgaaaagtaatcgggaa
gtggacaaggaggatggcaggcattacaagaaagtgcgtgatatggacgagtgtttgtcc
aaggacgctgtcaagtgcaagtcattcgataaaatcaaggaacaacaggagaaagaaaaa
aaccgcgctattgacgaaaagaccaagtcagatgatcggttgagatccaaatgcaaggac
aaggatgtgcgttcgcgtacgccgccgccgccgccgtcgtcatcggagcggtcatccaag
taccaacacgtcaaggagagtgcgtcgtcgaagacacaacgcagccgaacgccatcgagg
acgaggcgcgatctcaccccggcaaagaatccagagaagcaaagcaactcgtcaaatcgt
gttgcgagagacgcagagaagaaagatcgcgactcgcacaagagagataagagcaaagaa
cgagatgacgcgagaaagacggagcagacgtcttccggcaaagcgaaacaaacagtgact
tcgaatcaggacgaaagctatcgaaggagcaacacgagcaaggataatttcgacgataag
acttacggcggcgacaaagcgcggcagaagagccgcgagcgtcagcgcgagaaggagacg
agagacgagcgtccgtcgagattgaatcgcgatcagcgtcaagaacctcagcgtgacaag
gataaggatgaatctcaggagcgttgtcgtaacgagaggcagcgcgagcgggatcgtgat
cgggatcgggaccgagatcgagagagagaacgcgaacgcgacagggagagggatagggat
cgcgagcgagaacgagagcgtgatcgtgagcgggaaagagagcgagagatacgagagcgg
gatcgtgaccgggatcgagaaagagacaagtctatgaagtcgcgagagagagacgtgcct
gcggtggtatcgcccgcggccttgagcctatcagcggacaagagttcgcgttacagcagt
agtagaatcaaggaacgatccttaggcaaagatgtgtcgtttgaaaagagcggcggcact
cgcgagcggagcaggagcgaacgggaacgggaacgatccgagacaaaggctctcgccgaa
cgggaacggagctccacgcaatcacgtctagacggaaggtatgaaagaagcggcggcggc
ggcggcgtcgtcgagaaggacgtatcgtcgagtcgcggcaagtccaccgttaactcaccc
cgggatcgcatggatcgttttcgggatacgtctttggatcgtgggtctttgcacgacaaa
agtggacatgtcgcgacgtcgtcgagcgttcaatcaacagcgacgttaccgcccgttcct
ccggcttcatcttcctcgtcggtagtggctgtgacacccactctacctcgcgatcatcta
atggacatggtggacagtcactatgacagggatcggcacagaaggttcggtgtgagatac
gaacggggtcacacgtcggagcacagcggcagaaaggaccaggcgcgaatcgaatcgagt
cgcgttccgagcaagatcgaccggatagtggatcgtcgagacgcgaccagtccgcgacgc
gctatggaagtggacaggaattttggtaggaactatggcagactgcagaccgaacactgg
gacgagcaggaggagccggctccacatgtcgagtatcgggatcacagtcacattcacgag
gatgacaggagaaagaccatcgagggcagaaggtacgacagtcccttcgaggaaagacgc
gttgctcgcgacgagaggtccagagagtcgagatacgtgatccagactacagaacgagca
tccttcgacgatcatcgtcatcatcaccatcatcatcgacatcctctctaccctggcgat
aaattgagaagtggtggagccaatattagagatgaaactgtttctaacgataattgggag
ggacaccatcgtgatgtggaacacggtcgagatcgtggttatcagacagtggaatgggag
gagagagaatggcgtcctagaacgttatgggaaggcagagacagtcttcctcgttcagag
atacatgatgatgaatggaattcccgatacgataatcctgtaggcgactggaaatccaac
gatgcccggaaatgggataatcagaacatgcacgttcgatcgcattacaggaacgagcgc
tcgaaggatttggagcacggagaatctacgcaacatagcaaaagacgatcgtacaatgcg
ccggaaacaagagaagagccgccggcgattcatccttctgctaagcaagcagctatttac
ggcagcatgaaggaagaacctatcaacaaaaagctgatggaactcgctgaaggtagattg
tgcacaactactagagaaaaatctacggatagtttccaaaagaaaaattcgcaaaaggat
aaacctgaaatcaaggaacttgttgcggtggaaccgaagcgtcccatcgccgatgaatcc
ttgcagactcttcatactgaaagcgatttgagtgatattagcgacgatcctgatgatata
ttgaatatggaagaagataccacggatatggaaactaataaaacacgaacaaataagaaa
gcatcggatgctgcgcatcgcgatgcgcaatcaactgttcaggagccggctcagttatct
ccgaaagaacctgcggaagaaaatatttttacttcaaaatctaaggataatgccgataca
gtatcattgaagaatatggaagatgataatatggagactatggactttgaagaaatttct
gacggcgagttggaggaagacattaaaacgagcggcaaaggattaggtgatgccttagga
gtcgattgggaatctctcgtgaaggaaacacaagcaaagcgaattgtcccgtctaatcaa
gattccgcagagaatcgatggcagtgtaaagctatcttctatagaattggtatatctaag
aaatacgcgggcgaagatttcgtgaaaaagttgctaaaaaagtacgaaaagaacgatcat
aaagaatttttgctgaatgatattgcgctaatgcacacagcgctcgcgcgaaatcggttg
cttcaggatttaggcaatggcgcgatacatgctgtagatgatactttgtatagaaataat
aatgcgagttacgacgaagacatcgactatgattgggaaacattgaagccaagtactgcc
ttgtgcgaagaagtaaaatgtttattacagcaagtaatatga
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