Temnothorax longispinosus: 139814055
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Entry
139814055 CDS
T10889
Symbol
Hbs1
Name
(RefSeq) protein HBS1
KO
K14416
elongation factor 1 alpha-like protein
Organism
tln Temnothorax longispinosus
Pathway
tln03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tln00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
139814055 (Hbs1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tln03019
]
139814055 (Hbs1)
Messenger RNA biogenesis [BR:
tln03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
139814055 (Hbs1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
HBS1_N
GTP_EFTU_D2
MMR_HSR1
AAA_22
Dynamin_N
Ras
SpoIVA_ATPase
Motif
Other DBs
NCBI-GeneID:
139814055
NCBI-ProteinID:
XP_071636118
LinkDB
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Position
6:complement(8554994..8560033)
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AA seq
694 aa
AA seq
DB search
MSRHRDVRSMNYSDEYDGYDDVYGHSMEDDYCVSPSVEQFLFDRSKQQNIASFITEPDIV
EDNEDIDESLPSSDKDKYNLSELERTKLVSCLETIRNVIGDMVSDSKLKEKIILSNFDAN
TALDAILKESSPKKDIDSVVNKKRLELHSGNKLSAKPTLQVTTPSTVKVVPTGTKPIVKG
FDLSGVENTDLLSPRCGSPSSNRNSPEIKRKEDTIQKEKRTVSSKTNSPRCQSPVSDHVT
PELDCKVKFNASNEEKVDVGAIYKSKRGDSKEQLYLVVVGHVDAGKSTLLGRLLCDLGQV
PQRLIHKYQQESKKIGKQSFAYAWVLDETGEERERGITMDIGHSKFETDTKSITLLDAPG
HKDFIPNMISGATQADVALLVVDATRGEFETGFDSGGQTREHALLLRSLGVSQLAVVVNK
LDTVNWSKDRFNEIVDKMSVFLKQAGFKDTITFVPCSGLSGENIVTKPKEQLSNWYTGPT
LVNVIDNFKCPERPISKPFRFSINDIFKGTGSGFCVSGHVETGMVSLGDKVLILPQNEIA
VVKGLQSDEISTANAFAGDHVALTLAGIEQQNVGIGDIICNPQNPVPVTTCFQAHVVIFA
IAKPITKGLPVVMHQQSLVQPAVITKLIAQLHRSTGDVIKKKPRCLPKNSSAIIEVATQT
PICMELYKDIKQLGRVMLRLEGTTIAAGLITKIL
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcggcatcgagacgtccgttctatgaattactcggatgagtatgacggctatgat
gatgtttatgggcattcaatggaggatgattattgtgtatcacctagtgtggagcagttt
ttatttgatcgaagcaaacaacagaatattgcttcattcatcacagaaccagatatagtg
gaagataatgaagatatcgatgaatctttgccatcgtccgacaaagataaatataacctt
tctgaattggaaaggacaaagttagtatcttgtttggaaacaattagaaatgttataggt
gacatggtatctgattctaaactgaaggagaagattattctgtcaaattttgacgcaaat
acagcactcgatgctattttgaaggagtcgtcgccgaaaaaagacattgattctgtggtg
aataaaaaacgattggagctgcattcaggtaacaaattatcggcgaaacctacattgcaa
gttacaacgccgtctaccgtaaaggtcgtaccgaccggaacgaaacctattgtgaagggt
tttgatttaagtggtgtagaaaacacagatttattgagtccacgttgtgggagtccttct
tccaatcgaaatagtcctgagataaaacgtaaagaggataccatacaaaaggagaaaaga
acagtctcgtcgaaaacgaatagtccaagatgtcagtcacccgtgtcggaccatgtaaca
ccggaattagactgcaaagtaaaatttaatgcatctaacgaggagaaagtggacgtcgga
gcgatatacaaaagtaaaagaggcgatagcaaggagcagctttatttggtggtcgtggga
catgttgatgctggaaaaagcacattgcttgggcgactactttgcgatttgggtcaagtg
ccacaaagacttattcataaatatcaacaagagagtaagaagataggaaagcagtcgttt
gcctatgcttgggtgctcgacgagactggtgaagaaagagagcgaggaataacaatggac
ataggccactcgaagttcgaaacagacacaaaatctatcactctcctagatgcacctggt
cacaaggattttattccgaatatgataagcggcgctacgcaagcagatgtagctttgttg
gtagttgatgcaaccagaggcgaatttgaaactggatttgacagtggaggacagacgcgc
gaacacgccctattattacgttctttgggagtgtcgcaactagcagtagttgttaataag
ctggataccgtaaattggtctaaagatagattcaatgagatagtggacaaaatgagtgtg
tttctgaaacaagctggcttcaaggacaccatcactttcgtaccttgcagcggtttatcc
ggagagaacatagtaacaaagccaaaggagcagctctctaattggtataccggacctact
ctagtcaacgttatcgataatttcaagtgcccagagcggcctataagtaaaccgttccgt
ttttcgataaacgatatatttaagggcaccggatctggattctgtgtatccggtcacgtt
gaaacgggcatggtatccttaggtgacaaggttttaatactacctcaaaacgagatcgca
gttgtgaaaggtctccaatcggatgaaatttcgacagcaaacgctttcgccggtgatcac
gttgcgcttacattagcggggatcgagcagcaaaacgtgggtattggtgatatcatctgt
aatccgcagaatccggtacctgtaacgacctgctttcaagcgcatgttgttatattcgcg
atagcgaaaccgatcacgaaagggcttccagtggtgatgcaccagcagtctttggtacag
ccggcggttatcacgaaattaatagcgcaacttcatcgaagtaccggtgacgtgatcaaa
aagaagccgcgttgcttaccgaaaaattctagcgcgatcattgaggtcgcaacgcaaaca
ccaatctgcatggagttgtacaaggatattaaacaactaggtagagttatgttgcgatta
gaaggtaccaccattgcggctggtctgattacgaagattttgtaa
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