Temnothorax longispinosus: 139814412
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Entry
139814412 CDS
T10889
Symbol
Sce
Name
(RefSeq) E3 ubiquitin-protein ligase RING1
KO
K10695
E3 ubiquitin-protein ligase RNF1/2 [EC:
2.3.2.27
]
Organism
tln Temnothorax longispinosus
Pathway
tln03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
tln00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
139814412 (Sce)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tln04121
]
139814412 (Sce)
03036 Chromosome and associated proteins [BR:
tln03036
]
139814412 (Sce)
Enzymes [BR:
tln01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
139814412 (Sce)
Ubiquitin system [BR:
tln04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
139814412 (Sce)
Chromosome and associated proteins [BR:
tln03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
139814412 (Sce)
Noncanonical PRC1 (PRC1.1)
139814412 (Sce)
Noncanonical PRC1 (PRC1.3/1.5)
139814412 (Sce)
Noncanonical PRC1 (PRC1.6)
139814412 (Sce)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RAWUL
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-C3HC4_3
zf-RING_UBOX
zf-C3HC4_4
zf-Nse
zf-RING_5
zf-RING_4
zf-RING_6
RING_XB3-XBAT31
zf-rbx1
zf-UDP
zf-C3HC4_5
TRAF3_RING
Sina_RING
SOG2
Motif
Other DBs
NCBI-GeneID:
139814412
NCBI-ProteinID:
XP_071636757
LinkDB
All DBs
Position
6:17722172..17725593
Genome browser
AA seq
379 aa
AA seq
DB search
MASAEQVGLNKTWELSLYELHRTPQDAITDSTEIAVSPRSLHSELMCPICLDMLKKTMTT
KECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRPDPNFDLLISKIYPSRDEYEAHQ
ERVLAKLNKSHSQAALVNSITEGIKLQSQNRPQRSRKNANESENASNATSYNNTPNISAP
TTPNPSTNMANQSDSSQSATGPLNSGGTTSRNSTTPSPNPANQIPKPSKRQKSLQNSEND
SSSAEAETGGGDSMVDTEGEGPSEPLMLNEIELVFKPHPTEMAGDNSLIKALKENSIRYI
KTTANATVDHLSKYLAMRLTLDLDTELSESDRLLNFCIYIAPSPGQLVVLSGSQTLRQVN
DKFWRVNRPLEMYYSWKKT
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccgcggaacaggtcggcctcaacaaaacatgggaattgtcgctctacgagctg
caccgcaccccgcaggacgcgatcaccgacagcacggagatcgcggtcagtccgcggagc
ctgcacagcgagctcatgtgccccatttgcctggacatgctgaagaagaccatgaccacc
aaggagtgcctccaccgtttttgctccgactgtattatcacggctttacggagcggtaac
aaagaatgtcctacgtgcaggaagaaattggtttccaaaagatctctcagaccggatcca
aactttgatctgctaatctcgaaaatctatccgagcagagacgagtacgaagctcatcag
gaacgagttttggctaaactgaataagtcgcattcgcaggccgcgctcgttaactctatt
acggagggcattaagctacaaagtcaaaatcgtccgcaacgttccagaaaaaatgccaac
gaatctgagaatgcgagcaacgcaacgtcttacaacaatacaccaaatattagcgcacct
acaacaccaaatccgtctacgaatatggcgaatcaaagtgattcctctcagagtgcaacg
ggacctttgaatagtggaggaacgacatctagaaactctaccacaccgtcaccaaatccc
gcgaatcaaatcccaaaaccgtcgaaaaggcagaaaagccttcaaaattccgagaatgat
tcctctagcgcggaggctgagactggcggcggcgattccatggttgacacggaaggtgaa
ggtcccagtgaacctttgatgcttaacgaaattgaacttgtcttcaaaccacatcctaca
gagatggcaggtgacaattctttaataaaagcattgaaggagaacagtattcgctatata
aaaacaacagcaaatgccacagtggaccacttgagcaaatatttggcaatgcgtttaacg
ttagatttggataccgaattgtcggaatcagataggctattaaatttctgtatctatatc
gcgccttcacccgggcagcttgtggtgctaagtggctcacaaacgttacggcaagtgaac
gataaattctggcgtgttaatcgacccttggaaatgtactactcatggaagaagacctag
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