Temnothorax longispinosus: 139814415
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Entry
139814415 CDS
T10889
Symbol
Ykt6
Name
(RefSeq) synaptobrevin homolog YKT6 isoform X1
KO
K08516
synaptobrevin homolog YKT6
Organism
tln Temnothorax longispinosus
Pathway
tln04130
SNARE interactions in vesicular transport
tln04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
tln00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
139814415 (Ykt6)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
139814415 (Ykt6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tln04131
]
139814415 (Ykt6)
Membrane trafficking [BR:
tln04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
Ykt6
139814415 (Ykt6)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Longin
Synaptobrevin
Motif
Other DBs
NCBI-GeneID:
139814415
NCBI-ProteinID:
XP_071636765
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All DBs
Position
6:17355166..17357960
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AA seq
221 aa
AA seq
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MTTCCKCSIYEIYEQVFILFKMVKLYALTVLYKSVTSATTLKAAYDVESFSFFQKNSIKE
FMCFVSKTIVERTQTCARQSVKEGEYMCHVYVRADNLAAVLISDHEYPRRVAHTLITKVM
DEFAAKHPQSTWPTLREITADFPQINTYLAKYQNPLEADALTKMQNDLDETKIILHNTLE
AVLQRGEKLDDLVSKSEGLSAQSKAFYKTARKTNSCCSLAP
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atgacaacttgttgcaaatgctccatttatgagatctacgagcaagtttttattcttttc
aagatggtgaagttatatgcactgaccgttctatacaaaagtgttacgtcggcgacgacg
ctgaaggccgcttacgacgtagagtcgttctcattttttcaaaagaacagtattaaggaa
ttcatgtgctttgtcagtaaaaccattgtggaaagaacgcagacctgtgccaggcagagc
gtcaaggaaggcgaatacatgtgccatgtatatgtgcgagccgacaatctcgccgcagtt
ctcatctcggatcacgaataccccaggagagtggcgcacactctgattacgaaagtgatg
gacgagtttgcggcgaagcatccgcaatcgacatggcccacgctcagggagatcaccgcc
gactttccacagatcaatacgtatctagccaagtatcagaatccgctcgaggcagacgcg
ctcacgaaaatgcagaacgatctagacgagacaaaaataattctgcacaataccttagaa
gcggtgctgcaaaggggagagaagctggacgatctagtttccaagtcggaggggctcagc
gctcagtcgaaggcgttttacaagaccgcacggaaaaccaattcctgctgtagtttagct
ccttag
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