Temnothorax longispinosus: 139814433
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Entry
139814433 CDS
T10889
Name
(RefSeq) uncharacterized protein
KO
K14409
protein SMG7
Organism
tln Temnothorax longispinosus
Pathway
tln03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tln00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
139814433
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tln03019
]
139814433
Messenger RNA biogenesis [BR:
tln03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
139814433
mRNA cycle factors
Common to processing body (P body) and stress granule
139814433
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
TPR_8
Motif
Other DBs
NCBI-GeneID:
139814433
NCBI-ProteinID:
XP_071636792
LinkDB
All DBs
Position
1:9029693..9037776
Genome browser
AA seq
1166 aa
AA seq
DB search
MGLKAAVQALKKAEPLKDKVQRCKDLLNDNDAWVCQQQLQKIYQQVLILDLEYALDKKVE
QELWSLGFKNYIVTLQSQAKDRKNPKRGESQALLSWCLEAASGFYLTLLQEICTVFDLDL
PFRRKGYVYGCTSPWKAVEKLSPPHKSSCFYACQYCLVHLGDIARYRNESKQAEMFYRHA
VSLSPSSGQPYNQLALLEASRGDKLGTVFHYARSVAVKHPFPVATANLATTLSSALNDKS
FNIDGKTKLNSQEYIAVFLKLHGIIHVLGDLKLACLYSKQLTETLTALVATESFSSWMLV
QMLVINLYALQHTAGIGTDSTELLKNKQMVNDKKLARDCILDLIAGTLSALLLPVYTIKN
SIIEYFALPSIKLCLDWINIKPTVLEEVAFTSRLQIWPSLCVLLNALQNCVVDFKYDEYV
AVPLPEDRDLQGFLPLEKSFENLRFTNTALEGDVATLNKLRAVRILHLGHCFAQYQINGS
MPISIATEEKTGDNKFTSMSNGAGPSNELMKELEELSLNKDKQLDTSMSPVLSEAASSKS
SVETDIDILADKKIFQGILKPQGSLERNRDSLVSTTETSSSEASSLPCARKPRQNIAMQA
IMRRAENEKQVTFKNVSPVIVEEENDRKAKVVTVPPITSVANKPTPISEMPKANEAANTN
NILVNVQNRLSAMPLAPAAVQNQSASIQSQQRSAKLPPSIPMPAQVNQLAAKEQQTQQVA
QQMLPQMHTGMTAQCGQQASTLGPVCYPNQSFNVQNPQFAKNFMTNRPLPANTPRYQMQG
QLNNNSQPVPAMPQGINGIHHTINQSRPLHQRMPQNVSHSPGQLLQQNMRLGSPAQQNII
PQSMSLQANNMGLQPGMGMEQQNHSMGLQQQQSIIQSNPRPNDIHSQLNVNGSSIANMSA
MISALSVYEKDPQQQPLTTLTNSQSPTNTTNFQLNFNHFNQNQAFGQPLSQNQPSPSFYK
KNSDAIDFAFPNQVNVAKSQPQQQQQQPAPANNYMFCNYEPTEHFNLWKDSRPPQPPITW
WGSTSNTAVQMNMKDSTVNDNTFSNWSDSATVGNTASRVPLTPGKNYQPQQQTEHGRHLV
AGNNFEDSRLFELEQKPSQAVSTGNTYSLFSGNTWNTVNTSINSGSTNQDQVKARFHQQS
LWSGPGPSPLERLLEQQKSLREGGTT
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
atgggcctaaaggcagccgttcaggctctgaagaaagcggaaccgttaaaggacaaggtc
caacgctgcaaggacctgcttaacgacaacgatgcatgggtgtgtcagcaacagctgcaa
aagatatatcagcaggtcctcatactggatctggagtacgccctggacaagaaggtcgag
caggagctgtggagtcttggatttaagaattatatagtgactctgcagtcgcaggccaag
gacaggaagaatcccaagcgaggcgagtcacaggcattgctcagttggtgcctagaagcg
gccagtggtttctacctgaccttgctgcaagaaatctgcactgtatttgatttagaccta
ccgtttagaaggaaaggttatgtgtacggatgtacgtcaccatggaaggccgttgagaaa
ttatctccacctcacaaatcttcttgtttttatgcctgccaatattgccttgtacatttg
ggcgatatcgcacggtaccgaaatgagagcaaacaagctgagatgttctacagacacgct
gtctcgctatcaccatccagcgggcagccgtataatcaattggcgcttctagaagcttcc
cgtggtgataaattgggcactgtgtttcactacgcacgttcggtagccgtgaaacatcct
ttcccagtcgctacagcaaatctcgccaccactctgtcctccgctttgaacgacaaatct
ttcaatatcgacggcaagaccaaattgaattctcaggaatacatcgctgtttttctgaag
ctgcacggaataatccacgttcttggagatttgaagctggcctgcttgtacagcaaacaa
ttgacggaaacgctcaccgcgttggtagccactgaaagtttcagttcgtggatgctcgta
cagatgttggtgattaatctatacgctctgcaacacacagccgggattggcaccgacagt
acggaattgctcaagaacaagcaaatggtcaacgataaaaagctcgcccgtgactgtata
ctggacctaattgcaggcactttgtctgccttgctgctacctgtgtacacgataaagaac
tctatcatcgagtactttgcgttgccttctataaaactgtgccttgattggatcaacata
aaacctacggttttggaagaagttgcttttacatcgagattacagatctggcccagtctt
tgcgtgcttttgaatgccttgcagaattgtgtggtggattttaaatatgatgaatatgtt
gcagtaccactgccagaagatcgtgaccttcaaggttttttaccgttagagaagagtttc
gaaaatctcagattcacgaatacagcgctggagggtgatgtcgcaacattaaacaagtta
cgggcggtacgaattctgcatctgggccattgcttcgctcagtatcaaatcaatggatcg
atgccaatctcgattgcaacggaggagaagacgggcgataacaaattcacatctatgagc
aacggcgccggtcccagcaacgagttgatgaaagaactcgaggaacttagcttgaacaag
gataagcagctcgatacttcgatgagcccggtattatccgaagcagctagcagcaaaagc
tctgtggaaactgatatcgatattcttgcggataagaagatttttcagggtattcttaag
ccgcaaggttccttagaacgaaaccgagactccttagtgagtaccacagagacgagcagc
agcgaggcaagttctcttccgtgcgcgagaaaaccacgacagaacatagcaatgcaggcg
atcatgcgtcgtgcggagaacgagaagcaggtgacgtttaagaacgtgtcacctgtgatc
gtcgaggaagaaaatgatagaaaggcgaaagtagtgaccgttccgccgattacttctgtt
gcaaataaaccgacaccaatctcagagatgccgaaagctaacgaagctgccaatacaaat
aacatcctcgttaacgttcagaaccggctgtcggcgatgccactcgctccggccgccgtt
cagaaccaatccgcatcgattcagagccagcagagatctgctaagttgccgcccagcatt
cccatgcccgctcaagtaaatcaattggcagccaaagagcaacaaactcagcaagttgct
cagcaaatgctcccgcaaatgcacactggaatgacagcgcagtgcggtcaacaggcctcg
acattgggaccggtttgctacccgaatcaatcgttcaacgtgcagaatccgcaattcgcc
aagaatttcatgacgaatcgaccgctaccggcaaacacgccgcgttatcaaatgcaaggg
cagttaaataataacagccagccggttccagcgatgccgcagggcattaacggaatacat
catacgatcaatcagagcagaccgttgcatcagaggatgccgcagaacgtgtctcacagt
cccgggcagttgctgcagcagaacatgcgattgggatcacctgctcagcaaaatataata
ccgcaaagtatgagtttgcaagcgaataatatgggcctgcaaccaggtatgggtatggag
caacagaaccattcgatggggctgcaacagcagcagagcataatacagagcaatcccaga
ccgaacgacatacacagtcagttaaatgtgaacggttcgagtatagcaaacatgtcggcg
atgatatcggcattgtcggtgtatgaaaaagatcctcagcagcagccactaacgacgctg
acaaattcgcagagcccgaccaacacgacgaatttccaactgaacttcaatcatttcaat
cagaatcaagctttcggacaaccattgtcgcagaatcaaccgtcaccgtcgttctacaag
aagaattctgacgcaatagatttcgcattcccgaatcaggtcaacgtagctaagagtcag
ccgcagcaacagcaacagcaacctgcgcctgcgaataattacatgttttgcaattacgaa
ccgactgagcattttaacttgtggaaggacagtcggccacctcaaccgccgattacctgg
tggggttctaccagtaacacggcggtccagatgaacatgaaggattcgaccgttaacgac
aacacgttctcgaactggagcgattcagccactgtcggaaatacggcgagtagagtgccg
ttaacaccgggcaaaaattatcagccgcaacaacaaaccgaacatggcagacatcttgtg
gcaggaaataattttgaggattccaggttgtttgagctcgaacagaagccgtcccaagca
gtgagcactggcaacacttactccttgttcagcggcaacacatggaataccgttaataca
tcaatcaattcgggctcgaccaatcaagatcaggtgaaagcacggttccatcagcaatct
ctgtggtccgggccgggtccttccccgttagagcggcttctggagcagcagaagtcgcta
cgcgaggggggtaccacttga
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