Temnothorax longispinosus: 139814619
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Entry
139814619 CDS
T10889
Symbol
Herc4
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC4
KO
K10615
E3 ubiquitin-protein ligase HERC4 [EC:
2.3.2.26
]
Organism
tln Temnothorax longispinosus
Pathway
tln04120
Ubiquitin mediated proteolysis
Brite
Enzymes [BR:
tln01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
139814619 (Herc4)
Ubiquitin system [BR:
tln04121
]
Ubiquitin ligases (E3)
HECT type E3
139814619 (Herc4)
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139814619
NCBI-ProteinID:
XP_071637128
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Position
6:complement(23407416..23416891)
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AA seq
1078 aa
AA seq
DB search
MASRSRKRSVDESDTVVHIVVKRFKYCGIMFCWGSTIHGELGLGGIEDENIFMPREVDFT
EAKNVVQIACGENYSVAITKDGQVYSCGNNDYGQLGHEKARKRLQLIPGLDAFVFRKIAC
GNCHTLAVNEWGQLFSWGCNVNGQLGLNIVESTERVPRMVKVLGANVIVQIACGVEHSIA
LTNDGELYAWGSNRDGQLGLGSYTSNEIKPKRITTLAAVPIAFVACGGYHTVVISKSGAV
FSWGRNTFGQLGLNDTQQRCLPCQLRTLRNSKVCYATCGEDFSVFLTMDGGVFTCGAGMY
GQLGHGNNSNEILPRQVMELMGSTVTQVSCGKRHTLALVPSRGRVYAWGLGGAGQLGNRS
PQSATTPQVVLGPWSSPSGSSMVLDLHYSPQIDCVVKHIFSGGDHCFATISQKKDNIEPD
DCRILGSTSQILTVTEEKLGDCQRIPPGSPINHELMTYLETVFKSQACINASFLLSNDAH
YGCSSKNHGIDIDYAIRLFGIISELDNNTIQELIFTCVTDSLIPSFVDSPPDVESLRVYL
TLPLYHRFANLSNYSSLQTPFCKAVLKLKAEACKVVGIWWSAAPPYYFERLVRMYKSVVL
HFVKQSTADKIIMWTESLQCALQLLALLYKLNVTAGIRVPYETFHLSELSEYVDINRDYL
KWLTEDDRTYYRKIYFCNYPFLFDAEAKTTLLETDQAIQMQSAMNEAASRVVRDLMLGTA
ILNFEQYSQFVVLHVSRNNIVNDTLQQLFKYDSSELKRPLRVKFRDEEAEDVGGVRKEFF
MLLFAEILDFKYGMFKEYEETRTIWFSSDSLEEEDMYFLIGVLCGLAIYNFVIINLPFPL
VLYKKLLGESVGLSDVKDMSPTIARSLEDLLEYNESDLEEAFCLNFMVTREVFGEMKNFE
LIPGGENVPVTLKNKQQYVDLYVDYILNKSVETQFKAFHKGFHNVCGGRVLELFHSHELM
LLLIGNENYDWEELEKNATYKDGYTKSDPTIVLFWQVFHELSLEDKKKFLLFLTGSDRIP
IHGMKAIKITIQPMTDERFLPAAHTCFNLLDLPRYQTRERLKYKLLQAIQQNQGFSLV
NT seq
3237 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcagatcgagaaagcgttcggtggatgagagtgacacggtggttcatatagta
gtgaaacggttcaagtactgtggcattatgttttgttggggtagcactattcatggagag
ttgggtttgggtggtatcgaggatgagaatatcttcatgccgcgggaagtggattttaca
gaagcgaaaaatgttgtccaaattgcgtgtggagaaaattattccgtagctattacaaaa
gatggtcaagtgtattcctgcggcaataacgactacggacagcttggtcatgagaaggcg
aggaaaaggttacaactgatacctggcctggatgcatttgtgttcaggaaaatagcgtgc
ggtaattgtcatacactggctgtgaatgaatggggacaacttttcagttggggttgtaat
gtaaatggtcaattaggattaaatattgtcgaatctacagagcgtgttccacgtatggta
aaagtattgggtgcaaatgtgatagtgcaaattgcgtgtggcgttgagcattcgatcgct
ctgaccaatgacggagagttatatgcgtggggtagtaatagagacggacaattaggatta
gggtcctacacgtctaacgagataaaaccaaagaggattaccacattagctgctgtaccg
attgcatttgtcgcatgtggcggttatcacactgtagttatatcaaaatcaggagctgta
ttctcgtgggggagaaatacctttggacaattaggactaaatgatacacagcagaggtgt
ttaccatgtcagctacgtactctcagaaactcaaaagtatgttatgcgacctgtggtgag
gatttctcggtgttcttgacaatggacggtggagtgtttacgtgcggtgctggaatgtac
ggtcaattaggtcatgggaataactcgaatgagattttgccgcgacaagttatggagctg
atgggtagtactgttacgcaagtatcttgtggcaaaaggcatacgctcgctttagtgccg
tctagaggaagagtttatgcatggggcttgggtggtgctggacagttaggtaaccgttct
ccgcagagtgctacgacgccacaagtcgtcctaggaccatggtcttcgccgagcggatcg
tcgatggtgctcgacctgcactatagtcctcaaatcgactgtgttgttaagcatatcttc
agtggaggcgatcattgctttgctacgatcagtcagaaaaaagataatatagaaccagat
gactgtagaatattagggtcgacttcccaaattcttacagtgactgaggaaaagctaggc
gactgtcaaaggatcccaccaggttcaccgattaatcacgaattaatgacgtatttagaa
actgtattcaaaagtcaagcgtgtataaatgcgtcctttttactcagcaacgacgcgcat
tatggatgttcgagcaaaaatcacgggatcgatatcgactacgcgatcagattattcgga
attatctcagaactggacaataacacaattcaagaactgattttcacatgtgtaactgat
agtctgataccgtcgtttgtcgactctccgcccgatgtcgagtctttaagagtgtactta
acactaccgctatatcatcgcttcgccaatctgtccaactacagctctttacaaacgccc
ttctgcaaggcggtgttgaagctgaaggccgaggcttgcaaggtcgttggcatatggtgg
agtgcggctccgccgtattactttgagagactcgtgagaatgtacaagtccgtagtactc
cattttgtgaaacagtcaacggctgacaagattattatgtggactgagagcctacaatgt
gctctgcaattgttagcattattgtataaattaaatgtcacagctggtatacgagtaccc
tatgagaccttccacttgtcagaattatcggaatatgtagacattaaccgcgactacctc
aagtggctgacagaagatgatcggacttattaccgtaaaatatatttttgcaattatcct
ttcctatttgacgccgaggcgaaaaccacgttgcttgaaaccgatcaagctatacagatg
caatccgcgatgaatgaagcagcgtcgcgggttgtaagggatctgatgcttggtacagct
atccttaacttcgagcagtacagtcaatttgtagtactgcacgtttcacggaacaacata
gtcaacgataccctgcaacagttgtttaagtatgattctagcgagttaaagagaccactt
agagttaaattccgcgatgaggaggctgaagacgtgggtggtgtgagaaaagagtttttc
atgcttctctttgcagagattcttgattttaagtatggtatgtttaaagaatatgaagag
acgaggacgatttggtttagctcagactcgttagaggaggaagatatgtatttcctaatc
ggcgttctctgcggcttggccatttacaacttcgtaattattaatttaccatttccgctg
gtcttgtacaagaaacttttaggagaatcagtcgggctaagtgatgttaaggatatgtca
ccgacaatagctagaagtttagaagatcttctcgaatacaacgaatctgacctggaggaa
gcattttgcttgaatttcatggtgaccagggaagtgtttggcgagatgaagaacttcgaa
ttgataccgggtggtgaaaacgttcctgtaacattaaaaaataaacaacaatacgtggac
ctttacgtggactatatattgaacaaatcggtggaaacgcaattcaaagcgtttcacaaa
ggttttcataatgtatgcggcggaagggtgctggagttgtttcatagtcacgaattgatg
ttgcttttgatcggcaatgaaaattacgattgggaagaattggagaagaatgcgacttac
aaggatggctataccaaaagtgatcccactatcgtgctcttctggcaggtctttcacgaa
ctgtcattagaagacaagaagaaatttctactttttttaacgggtagtgacagaatacct
atacatggtatgaaagctataaagataacgatacagccaatgactgacgaacgtttccta
ccggctgcgcatacgtgtttcaatctactcgatctaccgcgttatcaaactcgcgaaaga
ttgaaatacaaattattgcaagctattcaacaaaatcaaggattctctcttgtgtga
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integrated database retrieval system
