Temnothorax longispinosus: 139815163
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Entry
139815163 CDS
T10889
Symbol
Mei-9
Name
(RefSeq) DNA repair endonuclease XPF
KO
K10848
DNA excision repair protein ERCC-4 [EC:3.1.-.-]
Organism
tln Temnothorax longispinosus
Pathway
tln03420
Nucleotide excision repair
tln03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
tln00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
139815163 (Mei-9)
03460 Fanconi anemia pathway
139815163 (Mei-9)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tln03032
]
139815163 (Mei-9)
03400 DNA repair and recombination proteins [BR:
tln03400
]
139815163 (Mei-9)
DNA replication proteins [BR:
tln03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
139815163 (Mei-9)
DNA repair and recombination proteins [BR:
tln03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
139815163 (Mei-9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC4
SAM_KSR1
MAS20
Motif
Other DBs
NCBI-GeneID:
139815163
NCBI-ProteinID:
XP_071637934
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All DBs
Position
6:5067558..5071333
Genome browser
AA seq
870 aa
AA seq
DB search
MLEYENQIFLEILQEDGLVITAKGLGIETVFANVIKAYSDPGNLVIILGTTNHDENYIID
LLKSYGTSRLPRIVNAECLSNEREIMYLEGGVLFISGRILVVDMLKNRVPLHLVTGILVY
RAHNILNAYQEAFALRLYRQHNKTGFIKAFTNSSLAFTVGYLRVERVMKALFVKKLYLWP
RFHTTINNCLSKHEPDVIELHVQITPKMQNIQTTLLDIMNYTVKELKRLNKSLDLDELTV
ENAIAKKFHKQLHLQIDPIWHQLSTTTKQLFSDLKTLRSLVISLTYEDSVTFYAMLNRLR
TMEYAVKAGGWIMLDEFENLFKYARSRVYTDKNELKPEPNPKWEALSEVLSEIQEQKHKK
KDYENIDKVLILVHDNTICRQLKNYLTMGANEYLLYEALKKLSHNKEQKTSCDSGKNAKD
QPSTSESNTEEETPEMQDTYVLTLSQKCTEGTQPSTSKEDVKHQTLFEECSQIAELDLTK
ETYTASAPIIFIQALKKGGDPMALQRILTEHMPNNIILYVADIGTVRQLEVYQNNNPSLN
LKVYFLIYGGSVEEQEYLTSLRREKEAFHSLINTKTTMVIPEDQDGKSDDCLALAIQADN
TDQDNTRKGGQSAAKIIPKVIVDMREFRSELPAILYTRGIKIEPVTLVVGDYILTPEICV
ERKSISDLIGSLFSGRLYNQAVSMTRHYAKPMLLIEFDQDKPFCFQGNYSVGRDLKNTNV
TAKLQLLTLHFPKLKIIWSPSPHATAQLFEELKQGRDQPDSNVAAKIGADDVENKQVMEE
KYNSHIQDFIAKLPGVHSKNLHILLNKGESLDHLVKLSEEELKEILGNKNDAELLYKALH
EKCQQSDENPGTSKGVSKVRGKRLFSRVKK
NT seq
2613 nt
NT seq
+upstream
nt +downstream
nt
atgttggaatacgaaaaccaaatcttccttgaaattcttcaggaagatggactagttatt
acagctaagggtcttggtatagaaactgtttttgcgaatgtgataaaagcttactcggat
ccgggcaatctagttataattttgggaaccaccaatcatgatgagaattacattattgat
ctgcttaaaagttatggaacaagtaggctaccgcgtatagtgaatgctgaatgtctctct
aatgaaagggaaataatgtatttggagggtggagtgctgtttatatcaggtcgtattttg
gtggttgacatgttaaaaaacagagttccgttgcacttggtcactggtattctcgtctat
agagctcacaatattctgaatgcttaccaagaagcatttgcgttgcgtttatatagacag
cataataaaactggatttatcaaagcgttcacaaattcatcactggctttcacggttggg
tatttgcgagtagaacgagttatgaaagctctgttcgtgaagaaattgtatttatggcca
cgtttccacacaactattaataattgcttgtccaagcatgagcccgatgttatagaacta
catgtacagatcacaccgaagatgcagaacattcaaaccactttacttgatattatgaat
tacaccgtgaaagaattgaagaggctcaataaatctttagacttagacgaactgactgta
gagaatgcaatagcaaagaaatttcacaagcagttacatttgcaaatagatccaatctgg
catcagcttagtacaacgaccaaacaattgttttccgatttaaaaacgttacgttccctt
gttatatccttgacatacgaagattctgttacattttatgccatgctaaatcgtttacgg
actatggaatatgccgtgaaagccggtggttggataatgttggatgaattcgagaatttg
ttcaaatatgcgagaagcagagtttacacagataagaatgaactgaaaccagaaccaaat
ccaaaatgggaagctttatcggaagtattatctgagattcaagaacagaaacataagaaa
aaagactatgaaaatattgataaagttcttatcttagtacacgataacactatatgtcgc
caattaaagaattatttaactatgggtgcaaatgaatatttactttatgaggctttgaaa
aaactatcgcataataaagaacaaaagacaagttgcgatagtggaaaaaacgcgaaagat
caaccatcaacatctgaaagtaatacagaggaagaaacgccggaaatgcaggatacttat
gtgctcaccttgtcgcaaaaatgcacagaaggaactcaaccaagtacttccaaagaagat
gtgaagcatcagacattgtttgaagaatgttcgcaaatcgcagaattggatttaactaaa
gagacttatacggcatccgcacctatcatttttatacaagctttaaagaaaggaggagat
ccaatggctttacaacgaatcttaactgagcatatgccaaataatattattttatacgtg
gccgatattggcaccgtgaggcaattagaggtgtatcagaataataacccatcattaaac
ttgaaagtatattttttaatttatggcgggtcggttgaagaacaagaatatcttacctct
ttacgacgggaaaaggaagcgtttcattctttgattaatacgaaaactaccatggttata
ccagaagatcaagatggaaaatcggacgattgtttggctcttgcaattcaggcggataac
acagatcaggacaatacacgtaaaggagggcaatctgcagccaaaataattccaaaagtt
attgttgatatgagagaattcagaagtgaattaccagccattttgtatacgcgcggtata
aaaatcgaaccggtgacattagtggtgggtgattacattttaacaccagaaatatgtgtt
gagaggaaaagtatatctgatttgattggctctttattttctgggagattatacaatcaa
gcagtttctatgacgaggcactatgctaaacccatgctcctcatagaatttgatcaggat
aaaccattctgttttcagggaaattactctgtcggtagagatcttaaaaatactaatgta
acagcaaaactgcaattattaactcttcactttcccaaactaaaaattatatggtctcct
agtccacatgctacagcacaattgtttgaagaattaaagcaaggacgagatcaacctgat
tcgaatgtagctgctaaaattggagcagatgacgttgaaaacaagcaagtaatggaagaa
aaatataactctcatatccaagattttatagctaaattgccgggtgtacattcgaaaaat
ttgcatattttattgaataaaggggaatcattagatcatcttgtcaagctctcagaagaa
gaactaaaagaaatactcggaaataaaaatgatgctgaattgctatataaagctcttcac
gaaaaatgtcagcaatcagatgaaaatccgggaactagcaaaggtgtctctaaagtacgt
ggtaagagacttttctccagggtaaaaaaataa
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