Temnothorax longispinosus: 139815166
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Entry
139815166 CDS
T10889
Name
(RefSeq) uncharacterized protein isoform X1
KO
K08131
collagen type IX alpha
Organism
tln Temnothorax longispinosus
Pathway
tln04512
ECM-receptor interaction
tln04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
tln00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
139815166
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
139815166
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
tln00535
]
139815166
Proteoglycans [BR:
tln00535
]
Extracellular matrix (ECM) proteoglycans
Others
139815166
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
139815166
NCBI-ProteinID:
XP_071637940
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Position
6:complement(5093992..5109921)
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AA seq
639 aa
AA seq
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MYLQTWIFTIAHIITYAQYTIAKRGLCNGYKSGEDDLQTFDFISKLKLDLLDARYNGMTK
VRGSNRMQTAYRLERDTDVTLPTKNITPNGLSEEFSLVYTLRARKSPKYPWHIIKIVDAK
GDAQLLITMNSRKRTLDFSSIDHEGELQTVSFVNDRVFDRGWHKVNFGVFKDKLVLNVDC
EFAGVEDLKPRGPIKVDGNISIAKMSNSKITVPIDVQWMVLNCDPTRHERETCEELPKTI
AAASLLQITPSCDTICPQGPHGFNGTDGLPGPSGAPGPIGASGSPGFPGPRGPPGEQGRT
GAPGNTGARGFPGLQGSKGAIGPAGPSGLPGSPGRKGERGDMGFPGLKGDQGPRGFPGPP
GNMSDFLYPVGSPGYKGEKGERGDNGVQGQPGEKGEPGDKGYPGLDGSRGRDGAPGLQGS
PGNRGQTGLPGLQGPPGHSISEAEIRDICATVLREQMTEMAALMQGPPGPPGRGRPGRPG
SPGVQGRPERLNELTESLRGLPGLPGPARHGRPGRAGKRGIPGDPGPPGLPGERGFVGLP
GSQGPIGPQGPPSERGEKGDRGPEGISLEGPPGPPGLSGPPGNDGVGLPGRQGDRGEPGR
PGVPGARGPPGVQGPPGYCEFCNYPGSNYLHNRGNEKGP
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgtatctgcaaacatggatattcacgatagcgcatataattacttatgctcaatatacc
atcgccaaacgcggattatgcaacggttacaagtctggcgaggatgatcttcagacattc
gactttattagcaagctgaaattggatctgctagatgcccgttacaacggcatgacgaag
gttcggggcagcaatcgcatgcagactgcataccggctggaaagagacactgatgtcacc
ctcccgacgaagaacatcacaccgaacgggctttcagaggagttctctttggtgtatacg
ttgagagctagaaaatcaccgaagtatccttggcacatcattaagatcgtggacgcgaaa
ggcgacgctcagcttctcatcacgatgaattccaggaagcgaacactggatttttcatcg
atcgaccatgagggagaattacagacggtctctttcgtgaatgatcgcgtgttcgacagg
ggttggcacaaggtaaactttggggtgttcaaggataagctggttcttaacgtcgactgc
gaattcgctggcgtggaagatctaaaaccgcgcggcccgattaaagtcgatgggaacata
tcgatagccaaaatgagcaatagtaagatcactgtaccgatcgacgtgcaatggatggtt
ctaaactgcgatccaacgagacacgagagagaaacgtgcgaagagctaccgaagaccata
gccgcagcctctctgcttcaaataacacccagctgtgacacgatttgtccgcaaggacca
catggattcaacggtacagacggattgcccggtccatccggagcgccgggaccaattggt
gcgtcaggctcgcctggatttccaggtccgcgtggcccgccgggagaacaaggaagaaca
ggagccccaggtaacactggtgccagaggttttccgggattgcaaggttcaaaaggagcg
atcggacccgcgggaccgtcgggattaccaggatcaccaggacgaaagggtgaaagaggg
gatatgggatttccgggtttgaaaggagatcagggtcctcgaggatttccgggtccgcca
gggaatatgagcgattttctttatcctgttggatcaccaggatacaagggtgagaaaggt
gaacggggagacaatggtgttcaagggcagccgggtgagaaaggcgaacctggagacaaa
ggatatccgggattagatggatctcgcggtcgtgacggagcgcctggattgcaaggttcc
cccgggaacagaggacaaacgggattacccggccttcaaggtccaccaggccatagtata
agtgaggcagaaattcgcgatatctgcgccactgttctgagagaacagatgaccgaaatg
gcagcgctaatgcaaggtccgccgggcccacctggccgaggtcgtccgggccgtcctgga
tcacctggggtccaaggtcgtccagaaagactgaatgaactaacagagagtctacgaggg
ctacccggattaccgggaccggctcgacacggccgtcccggtcgagccggaaagcggggc
atcccaggcgacccgggcccaccgggtttaccaggggaacgtggattcgtcggtttacct
ggctcgcagggtcccatcggtccacagggaccacctagtgaacgtggagaaaagggggac
agaggtcccgagggaatcagtttggaaggtccgcctggtccaccgggtctatcagggcct
cctggtaatgacggcgtcggtttacctggaagacagggagatagaggtgaaccaggcaga
ccaggtgttcctggtgcgaggggaccgccaggagtgcagggaccgcccggatactgcgaa
ttctgcaattatcctggcagcaattacctgcataatcgtggcaatgagaaaggtccttaa
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