Temnothorax longispinosus: 139815351
Help
Entry
139815351 CDS
T10889
Symbol
Polybromo
Name
(RefSeq) protein polybromo-1 isoform X1
KO
K11757
protein polybromo-1
Organism
tln Temnothorax longispinosus
Pathway
tln03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
tln00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
139815351 (Polybromo)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tln03021
]
139815351 (Polybromo)
03036 Chromosome and associated proteins [BR:
tln03036
]
139815351 (Polybromo)
Transcription machinery [BR:
tln03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
139815351 (Polybromo)
Chromosome and associated proteins [BR:
tln03036
]
Eukaryotic type
Chromatin remodeling factors
PBAF complex
139815351 (Polybromo)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromodomain
BAH
HMG_box
HMG_WDHD1
HMG_box_2
Zap1_zf1
Motif
Other DBs
NCBI-GeneID:
139815351
NCBI-ProteinID:
XP_071638329
LinkDB
All DBs
Position
6:complement(7052797..7064565)
Genome browser
AA seq
1646 aa
AA seq
DB search
MNKRRRTSSVASRGTEDDSDDVPPEPTKRRKKLDPSDLCQQLYDILRNQKKEDGSLLCDA
FIRVPKRRQEPGYYEVVSNPIDLLKVQQKLKTDEYRDMDDLAADIQLMVNNAKAFYMRTS
PEYKDATELWELCVNTKNRIMEEYEEPEPKGKLILKVGRLARKVTTRQDDAEDTSESSTN
LDEETMQLFEDLFAAVMTATDPTDNNRPLHIMFQLKPSKKLYPEYYDVIETPIDLKTIAR
KIQEGAYSSLGDMEKDLMLMCRNACQFNEPGSQIYKDAKLLKKIITAAARRQDGGFGNTL
KIATTAPSTRSKRGSRTMAQSLIAQTAALPDEDDESDDEEEEPAETEEADNPQWQLFQTI
RTAPNNQGVRMSEYFWKLPSKRLYPDYYKMIKNPISLLQIRTKIKKGEYGTVSEVAGDMN
IMFENAKKYNMHTSRLYKCAVKLQKIMQEKVQELLEFDQDSDSDSESENSLQQPKLIKRA
SNLLTRGKYKDNIPLKKRLHALVKCVMEYCEDGRQPMLMFMEKPSKKLYPDYYQVIAEPI
DMLAIEANIKVEKYQSENELILDFKLMFNNCRQYNEEGSLIYEDANTLEKVLMDKVKELG
PLPDNPRSKSTASTPTRNVGRPKKVIPVHLQKLRTLYDTIKDYHDAKGRQLSLIFMKLPN
KNEYPDYYEVIKQPIHMEKIASTLKNNGYDNLDELVSDFILMFDNACKYNEPDSQIYKDA
LILQRLVLQSKLQLSEDEESVPDVSAAIQEILATIFTALYNHQDEEGRCYSDSMAELPEH
DIVDGKKVRGLSLDLIKRRLDRGVYKRLDRFQEDVFTCLERARRLSRTDSQPFEDSVELQ
AFFLRTRDEVTRGGELLQSPALNYTLLELSTQVAELKRIKQQQELNLPNEDESCDGNETK
DSETNTNETNNTDNGGSMSFNQEVYRAGDFTYIEPTERGMEYSVVLIERLWTNADGQQML
YGNLFYRPSETYHVASRKFLDKELFKSDAHVAVPLAKVAGRCCVLSVKDYFRMQPEGFQE
KDVYVCESRYSTKARAFKKIKVWNFDPDHLTLVSREKPLEPKRVISVYKERLEKHKEEIA
ELEEGEKLMEKERPNVILYNPEDTENTYYEQYSMCVGSVKTGDFVYVATDGGRQQIAQVD
SIWSTKDGKCYFKGPWLLMPTEVPHAPTKLFYKQELFLSTVDGTHPIVAIVGKCAVLDYG
DYICSRPTEIPEDDVYICESFYDESKSLIKKFGQEGLKKFNHTPAVTEDEIYFFRRSINP
AKVSSDVAQTQSQVKSVTPSSAQFEMEASPLLPKLEPDVLSMGVGLGVGVGVGVGEDSMD
AGGPPSVGSTEAQPVLSNTQTPVSTKKKTAGKKLVTGYILYSSKMRTQITQNNPESSFGE
ISRIVGNEWRKLPAGEKQAWEERAIKMNEDGGQLKGTTSVGTNSTQDVVYECCWDKCDWQ
FEDMTDCIDHCIAEQDGHVQSSFVNAPSDVEFQCQWRGCGRTKKSVPPFPSVQRLARHVK
EVHILKSHGRIIPPSERSRNYMASKGPTVLPPMETETSAAATQTSSLPATKQPEPMFVAV
PPRPSRVLHSDAYLRYIEGLNVENRYISNWDKQMNANPDNTQIPDVTKLPAEWLGNGVGN
HGNVVNALWTLRNMMMRDVLAINKTL
NT seq
4941 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagcggcgtagaacgtcgtcggtggcgagtcgcggcaccgaggacgacagcgac
gacgtcccgcccgagccaacgaagaggaggaaaaaactggatcctagcgacctgtgccaa
caactgtacgatatacttcgcaatcagaagaaggaggatggatccctgttgtgcgacgcg
tttatacgtgtcccgaaacgccggcaggagccgggatactacgaggttgtctccaatcct
atagatctgttgaaagtgcagcagaagctgaaaacggacgagtatcgcgatatggacgac
ctagccgctgatattcagcttatggtgaacaacgccaaagctttctacatgcgtacctcc
cctgaatacaaagatgcgactgaactgtgggaactgtgtgtaaatactaaaaatcgtatc
atggaggagtacgaagagccagaacctaagggaaaacttattctaaaagttggcagattg
gcgcgtaaagtaacgacgcgacaagacgatgcggaagatacttcggaaagttctacgaat
ctcgacgaggaaactatgcagctattcgaagatttgtttgcggcggttatgacagcgact
gatcccactgacaataacagacctcttcatattatgtttcaactcaaaccgtctaaaaag
ctttatcccgaatattacgacgtcatcgagaccccgatcgatttgaagaccatcgcgagg
aagattcaagagggtgcatatagctcactcggcgatatggagaaagatctaatgctcatg
tgccgtaacgcctgtcaatttaacgagcctggctcgcagatttataaggatgccaaactt
ttgaaaaagataattaccgcagccgcgagaagacaagacggcggatttggcaataccctt
aagatcgctacaaccgcaccgtcgactagaagcaaaaggggcagtcgtaccatggcgcag
tcattaatagcacaaactgcagcattacccgacgaagatgatgagagcgacgacgaggaa
gaagaacccgctgagactgaggaagctgataatccacaatggcaattatttcaaaccatt
cggacagctcctaataatcaaggtgtaaggatgagcgaatatttttggaagcttccatca
aagagattatatcctgattactataagatgattaaaaatcctatatctttattacaaata
cgtacaaagataaagaaaggcgaatatggtactgttagtgaagtagctggagatatgaat
atcatgtttgagaatgctaagaaatataacatgcatacttctcgactatacaagtgtgct
gttaaattgcaaaaaataatgcaggagaaagtacaagaactcttagaattcgatcaggac
tccgattcggatagcgaatccgagaacagtttgcagcaacctaaattgattaaacgtgcg
tcgaatttgttgacacgagggaaatacaaagacaatataccattgaagaagagattgcac
gcattagtcaagtgtgttatggaatactgtgaagacggtcggcagcctatgttaatgttt
atggagaagccttccaaaaaattatatccggactactatcaagtgatagcggaacccata
gacatgctggcgatcgaagctaatattaaagtggagaaatatcaaagcgaaaacgaattg
atactggattttaagttgatgtttaataattgccgtcaatacaacgaggaaggttcattg
atatatgaagacgctaatacattggagaaagttttgatggataaggtaaaagaattagga
cccttgccggataatcctagatccaaatccaccgcatcgaccccaaccagaaacgtcggg
agaccgaaaaaagtgataccggttcatctgcaaaaattacgaaccctgtacgatactata
aaagactaccacgatgcaaaagggaggcagttatctctaattttcatgaaattaccaaat
aaaaatgaatatccagattattacgaggtgataaagcagcctatacatatggagaagata
gcttcgactttgaagaataacggatacgacaacttggacgagttggtgtccgattttata
ttaatgtttgacaacgcttgcaagtataacgagccggactcgcaaatatacaaggacgcc
ttgatacttcaaagattagtgctgcaaagtaaactgcaactgagcgaggatgaggagagt
gtacctgacgtgtcggctgccatccaagagatcctggcgacgatatttaccgcgctttac
aatcatcaggatgaggagggaagatgttactccgattctatggcagagctgccggagcac
gatatcgtcgacggcaaaaaggtacgagggctgtcgttagatctgattaagaggagattg
gatcgaggagtttacaaaaggctggatcgatttcaagaagacgttttcacatgcttggag
agagcacggaggttatcgcgcacagactcgcaaccgttcgaagacagcgtggaactccag
gcatttttcctacgcactcgtgatgaagtgactcgcgggggagaactattacagtcgccg
gcgttaaattacaccctcctagagctgtctactcaggtagcggaacttaaaaggataaaa
cagcagcaagaattgaatctacctaacgaagacgaaagttgcgatggaaatgagacaaag
gactctgaaacaaatacgaatgaaacaaataataccgataatggaggttctatgagtttc
aatcaagaagtatacagggctggtgactttacatacatcgagcctacggagaggggcatg
gaatatagcgttgttctcatagaaagactttggaccaacgcggatggccagcagatgttg
tacgggaatttattttatagacccagcgaaacgtatcacgtggcatcacgaaaatttctg
gacaaggaattatttaagagcgacgctcacgtagcggtacccttagcgaaagtagccggc
agatgttgcgttctaagtgtaaaggattattttcgaatgcagcctgaaggcttccaggaa
aaggatgtttacgtatgcgaatcacgttactccacaaaagcccgagcgttcaagaagatc
aaggtctggaatttcgatcccgatcacttgactttggtttccagagaaaaaccattagaa
ccgaaacgagtgatatcggtgtataaagaacgattggagaaacataaagaagaaatcgcc
gagttggaggagggagaaaaattaatggaaaaggaaagacctaatgtgatactatataac
ccggaagacacggagaacacgtattacgaacagtacagcatgtgcgtgggatctgtgaaa
accggcgattttgtttacgtagcgacagacggaggcaggcaacaaatagcacaggtcgat
tctatatggtcaaccaaagacgggaagtgttatttcaagggcccatggttattgatgcct
acagaagtgccacatgcgcctacgaaattattttataagcaagaattgtttttatctacc
gtagatggtactcatcccatagtagctattgttggaaagtgtgccgtccttgattacgga
gactatatatgtagcagaccgacggagataccggaggacgacgtgtacatttgcgaatcg
ttttacgacgagagtaagagcttgataaaaaagtttggccaagagggtttaaagaagttc
aatcacacgccagcggtgaccgaagacgagatctacttcttccgaaggtccattaatcct
gcgaaagtttcgagcgacgtggctcagacgcaaagtcaagtcaagtccgtcacgcccagc
tcggctcaatttgaaatggaagcgtcaccattgttaccgaagctggaaccagatgtacta
agcatgggggtaggattaggagtgggagtgggagtaggagttggggaagacagcatggat
gctggtggtccaccatccgttggatctacggaagctcaaccggtgctctccaatactcag
acacctgtgtcgactaagaagaaaacggcgggtaagaaattagttacgggctatattttg
tattcgagtaaaatgcgaacgcagattacacaaaacaatcctgaatcgtccttcggagag
attagcagaattgttggcaacgagtggaggaaattgccggcgggagagaagcaagcatgg
gaggagcgggcgatcaagatgaacgaggacggcggccagctgaagggcacgacttcggtg
ggcacgaactccacgcaggacgtcgtgtacgagtgctgctgggacaagtgcgactggcag
ttcgaggacatgaccgattgcatcgatcactgcatcgcggaacaggacggtcatgtgcaa
tcgtcgttcgtaaacgctcctagcgatgtggaatttcagtgccagtggcgtggctgcggc
cgaacgaagaaatctgtcccgccgttcccgagtgtgcagagactcgcgaggcacgttaag
gaggtgcatattctcaagtcgcacgggcgcataataccaccttccgagagaagcaggaat
tacatggcctcgaaaggacccacggtactgccgccgatggagacagaaacttcagctgcc
gcaactcagacaagcagcttgcccgccactaaacaaccagagccgatgttcgtcgcggta
ccaccgagaccaagtcgcgtattgcattcggacgcttatctgaggtatatcgagggtcta
aacgtagagaatcgctacatatcaaattgggataagcagatgaacgccaatccggataat
acgcagatccccgatgtgacgaaactaccggccgagtggctgggtaacggcgttgggaac
catgggaatgtggtaaacgccttgtggacactcagaaacatgatgatgcgggatgtgtta
gccatcaataaaactttatag
DBGET
integrated database retrieval system